RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 ERLIN2O94905 339 aa17.82■□□□□ 0.44
CLCNKA-203ENST00000439316 LIG3P49916 1009 aa17.82■□□□□ 0.44
CLCNKA-203ENST00000439316 KLRC3Q07444 240 aa17.82■□□□□ 0.44
CLCNKA-203ENST00000439316 RASA3Q14644 834 aa17.82■□□□□ 0.44
CLCNKA-203ENST00000439316 PTPROQ16827 1216 aa17.82■□□□□ 0.44
CLCNKA-203ENST00000439316 USH1GQ495M9 461 aa17.82■□□□□ 0.44
CLCNKA-203ENST00000439316 RINT1Q6NUQ1 792 aa17.82■□□□□ 0.44
CLCNKA-203ENST00000439316 SEC14L1Q92503 715 aa17.82■□□□□ 0.44
CLCNKA-203ENST00000439316 GOLGA6L10A6NI86 522 aa17.82■□□□□ 0.44
CLCNKA-203ENST00000439316 NDUFB10O96000 172 aa17.82■□□□□ 0.44
CLCNKA-203ENST00000439316 NAA35Q5VZE5 725 aa17.82■□□□□ 0.44
CLCNKA-203ENST00000439316 DDX42Q86XP3 938 aaKnown RBP eCLIP17.82■□□□□ 0.44
CLCNKA-203ENST00000439316 FAM186BQ8IYM0 893 aa17.82■□□□□ 0.44
CLCNKA-203ENST00000439316 POLD4Q9HCU8 107 aa17.82■□□□□ 0.44
CLCNKA-203ENST00000439316 TTC7AQ9ULT0 858 aaPredicted RBP17.82■□□□□ 0.44
CLCNKA-203ENST00000439316 PCDHB13Q9Y5F0 798 aa17.82■□□□□ 0.44
CLCNKA-203ENST00000439316 RBBP6Q7Z6E9 1792 aaKnown RBP17.81■□□□□ 0.44
CLCNKA-203ENST00000439316 F8VZ95 297 aa17.81■□□□□ 0.44
CLCNKA-203ENST00000439316 GCOM1H8Y6P7 765 aaPredicted RBP17.81■□□□□ 0.44
CLCNKA-203ENST00000439316 EVI5O60447 810 aa17.81■□□□□ 0.44
CLCNKA-203ENST00000439316 MYZAPP0CAP1 466 aa17.81■□□□□ 0.44
CLCNKA-203ENST00000439316 ITGA4P13612 1032 aa17.81■□□□□ 0.44
CLCNKA-203ENST00000439316 SOX5P35711 763 aa17.81■□□□□ 0.44
CLCNKA-203ENST00000439316 PSMC2P35998 433 aaKnown RBP17.81■□□□□ 0.44
CLCNKA-203ENST00000439316 GALCP54803 685 aa17.81■□□□□ 0.44
CLCNKA-203ENST00000439316 ZNF844Q08AG5 666 aa17.81■□□□□ 0.44
CLCNKA-203ENST00000439316 DAAM2Q86T65 1068 aa17.81■□□□□ 0.44
CLCNKA-203ENST00000439316 GPC2Q8N158 579 aa17.81■□□□□ 0.44
CLCNKA-203ENST00000439316 SYT11Q9BT88 431 aa17.81■□□□□ 0.44
CLCNKA-203ENST00000439316 MKNK1Q9BUB5 465 aa17.81■□□□□ 0.44
CLCNKA-203ENST00000439316 RGL1Q9NZL6 768 aa17.81■□□□□ 0.44
CLCNKA-203ENST00000439316 IGLV3-22A0A075B6J6 115 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 TAL1P17542 331 aaPredicted RBP17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 INPP5BP32019 993 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 MTMR3Q13615 1198 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 TNFAIP1Q13829 316 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 ARFGAP2Q8N6H7 521 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 CYP2W1Q8TAV3 490 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 ZNF473Q8WTR7 871 aaKnown RBP17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 HSD17B14Q9BPX1 270 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 TUFT1Q9NNX1 390 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 HACL1Q9UJ83 578 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 UBE4BO95155 1302 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 PIK3CDO00329 1044 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 TBC1D12O60347 775 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 FAM13AO94988 1023 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 TMEM253P0C7T8 217 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 BIRC3Q13489 604 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 BTNL9Q6UXG8 535 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 C1orf186Q6ZWK4 172 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 NLRP14Q86W24 1093 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 CCDC26Q8TAB7 109 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 MYCBPAPQ8TBZ2 947 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 RFFLQ8WZ73 363 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 KAT2BQ92831 832 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 STK33Q9BYT3 514 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 GPRC5DQ9NZD1 345 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 AMACRQ9UHK6 382 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 AMFRQ9UKV5 643 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 FRMPD4Q14CM0 1322 aa17.8■□□□□ 0.44
CLCNKA-203ENST00000439316 PPP1R12BO60237 982 aaPredicted RBP17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 NMT1P30419 496 aaKnown RBP17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 HOXA13P31271 388 aaPredicted RBP17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 CTNNA1P35221 906 aaKnown RBP17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 FMO5P49326 533 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 POU5F1Q01860 360 aaKnown RBP17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 OR2W6PQ8NHA6 318 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 TEPSINQ96N21 525 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 IKZF4Q9H2S9 585 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 RNF181Q9P0P0 153 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 SFI1A8K8P3 1242 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 MYO1FO00160 1098 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 DDX3YO15523 660 aaKnown RBP17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 MEFVO15553 781 aaPredicted RBP17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 DAPK3O43293 454 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 BUB1BO60566 1050 aaPredicted RBP17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 ZNF76P36508 570 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 FLT3P36888 993 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 PPATQ06203 517 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 AGBL2Q5U5Z8 902 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 ICE2Q659A1 982 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 RUFY4Q6ZNE9 571 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 MICALCLQ6ZW33 695 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 TMC3Q7Z5M5 1100 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 YTHDF3Q7Z739 585 aaKnown RBP17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 GLYCTKQ8IVS8 523 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 PROCA1Q8NCQ7 364 aaPredicted RBP17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 TRPM4Q8TD43 1214 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 CCT8L2Q96SF2 557 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 FIZ1Q96SL8 496 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 GPR88Q9GZN0 384 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 SLC12A6Q9UHW9 1150 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 GGA2Q9UJY4 613 aa17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 DIS3Q9Y2L1 958 aaKnown RBP17.79■□□□□ 0.44
CLCNKA-203ENST00000439316 TTI1O43156 1089 aa17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 KIAA0754O94854 1291 aa17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 FAM107AO95990 144 aa17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 BMP3P12645 472 aa17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 IKQ13123 557 aaPredicted RBP17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 CTTNQ14247 550 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms