RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 PFKFB3Q16875 520 aaPredicted RBP16.02■□□□□ 0.16
TSC2-206ENST00000439117 SPATA4Q8NEY3 305 aa16.02■□□□□ 0.16
TSC2-206ENST00000439117 SGSM3Q96HU1 749 aa16.02■□□□□ 0.16
TSC2-206ENST00000439117 CEP170P1Q96L14 293 aa16.02■□□□□ 0.16
TSC2-206ENST00000439117 FAM161BQ96MY7 647 aa16.02■□□□□ 0.16
TSC2-206ENST00000439117 LY9Q9HBG7 655 aa16.02■□□□□ 0.16
TSC2-206ENST00000439117 WARS2Q9UGM6 360 aaKnown RBP16.02■□□□□ 0.16
TSC2-206ENST00000439117 TTLL3Q9Y4R7 772 aa16.02■□□□□ 0.16
TSC2-206ENST00000439117 ADGRB1O14514 1584 aa16.02■□□□□ 0.16
TSC2-206ENST00000439117 TMPRSS15P98073 1019 aa16.02■□□□□ 0.16
TSC2-206ENST00000439117 SRRM1Q8IYB3 904 aaKnown RBP16.02■□□□□ 0.16
TSC2-206ENST00000439117 TTC25Q96NG3 672 aa16.02■□□□□ 0.16
TSC2-206ENST00000439117 PALMDQ9NP74 551 aa16.02■□□□□ 0.16
TSC2-206ENST00000439117 KRT82Q9NSB4 513 aa16.02■□□□□ 0.16
TSC2-206ENST00000439117 ANKFY1Q9P2R3 1169 aa16.02■□□□□ 0.16
TSC2-206ENST00000439117 EIF2AK2P19525 551 aaKnown RBP16.02■□□□□ 0.15
TSC2-206ENST00000439117 PTPREP23469 700 aa16.02■□□□□ 0.15
TSC2-206ENST00000439117 POLR3CQ9BUI4 534 aaPredicted RBP16.02■□□□□ 0.15
TSC2-206ENST00000439117 FAM187AA6NFU0 413 aa16.02■□□□□ 0.15
TSC2-206ENST00000439117 ATICP31939 592 aa16.02■□□□□ 0.15
TSC2-206ENST00000439117 ARHGEF6Q15052 776 aa16.02■□□□□ 0.15
TSC2-206ENST00000439117 DHX40Q8IX18 779 aaKnown RBP16.02■□□□□ 0.15
TSC2-206ENST00000439117 GFPT2O94808 682 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 CHRNA5P30532 468 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 ARFIP2P53365 341 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 KIF2CQ99661 725 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 USP42Q9H9J4 1324 aaKnown RBP16.01■□□□□ 0.15
TSC2-206ENST00000439117 MEIS1O00470 390 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 NMT2O60551 498 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 SNAP25P60880 206 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 IL1RL1Q01638 556 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 RAPH1Q70E73 1250 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 AP5M1Q9H0R1 490 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 TRAF3IP3Q9Y228 551 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 ESYT2A0FGR8 921 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 CATSPER1Q8NEC5 780 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 NSUN4Q96CB9 384 aaKnown RBP16.01■□□□□ 0.15
TSC2-206ENST00000439117 USP32Q8NFA0 1604 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 ORC4O43929 436 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 NTSR2O95665 410 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 PLCG1P19174 1290 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 PDIA6Q15084 440 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 FAM83BQ5T0W9 1011 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 LRIG3Q6UXM1 1119 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 RGS9BPQ6ZS82 235 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 SPATA21Q7Z572 469 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 WRNIP1Q96S55 665 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 GJB4Q9NTQ9 266 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 DONSONQ9NYP3 566 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 TLK1Q9UKI8 766 aa16.01■□□□□ 0.15
TSC2-206ENST00000439117 CNTNAP4Q9C0A0 1308 aa16■□□□□ 0.15
TSC2-206ENST00000439117 EIF4E1BA6NMX2 242 aaKnown RBP16■□□□□ 0.15
TSC2-206ENST00000439117 KDM1AO60341 852 aa16■□□□□ 0.15
TSC2-206ENST00000439117 DNAJC6O75061 913 aa16■□□□□ 0.15
TSC2-206ENST00000439117 LSP1P33241 339 aa16■□□□□ 0.15
TSC2-206ENST00000439117 NOP14P78316 857 aaKnown RBP16■□□□□ 0.15
TSC2-206ENST00000439117 CYLC2Q14093 348 aaPredicted RBP16■□□□□ 0.15
TSC2-206ENST00000439117 LRRC41Q15345 812 aa16■□□□□ 0.15
TSC2-206ENST00000439117 BBS9Q3SYG4 887 aa16■□□□□ 0.15
TSC2-206ENST00000439117 RCSD1Q6JBY9 416 aa16■□□□□ 0.15
TSC2-206ENST00000439117 PPP4R3CPQ6ZMV5 832 aa16■□□□□ 0.15
TSC2-206ENST00000439117 PCGF5Q86SE9 256 aa16■□□□□ 0.15
TSC2-206ENST00000439117 MOV10L1Q9BXT6 1211 aaKnown RBP16■□□□□ 0.15
TSC2-206ENST00000439117 PNMA3Q9UL41 463 aa16■□□□□ 0.15
TSC2-206ENST00000439117 RIMS1Q86UR5 1692 aaKnown RBP16■□□□□ 0.15
TSC2-206ENST00000439117 ESYT3A0FGR9 886 aa16■□□□□ 0.15
TSC2-206ENST00000439117 COPEO14579 308 aa16■□□□□ 0.15
TSC2-206ENST00000439117 SAT1P21673 171 aa16■□□□□ 0.15
TSC2-206ENST00000439117 HDAC4P56524 1084 aa16■□□□□ 0.15
TSC2-206ENST00000439117 CACNB1Q02641 598 aaPredicted RBP16■□□□□ 0.15
TSC2-206ENST00000439117 MED21Q13503 144 aa16■□□□□ 0.15
TSC2-206ENST00000439117 TRMT10CQ7L0Y3 403 aaKnown RBP16■□□□□ 0.15
TSC2-206ENST00000439117 RFX6Q8HWS3 928 aa16■□□□□ 0.15
TSC2-206ENST00000439117 ZNF710Q8N1W2 664 aa16■□□□□ 0.15
TSC2-206ENST00000439117 PRPF31Q8WWY3 499 aaKnown RBP16■□□□□ 0.15
TSC2-206ENST00000439117 GCNT4Q9P109 453 aa16■□□□□ 0.15
TSC2-206ENST00000439117 ZHX2Q9Y6X8 837 aa16■□□□□ 0.15
TSC2-206ENST00000439117 PXDNLA1KZ92 1463 aa16■□□□□ 0.15
TSC2-206ENST00000439117 PALM3A6NDB9 673 aaPredicted RBP16■□□□□ 0.15
TSC2-206ENST00000439117 CCNI2Q6ZMN8 369 aaPredicted RBP16■□□□□ 0.15
TSC2-206ENST00000439117 RNF207Q6ZRF8 634 aa16■□□□□ 0.15
TSC2-206ENST00000439117 RAB44Q7Z6P3 723 aaPredicted RBP16■□□□□ 0.15
TSC2-206ENST00000439117 EXOC8Q8IYI6 725 aa16■□□□□ 0.15
TSC2-206ENST00000439117 TTC17Q96AE7 1141 aa16■□□□□ 0.15
TSC2-206ENST00000439117 ACCSQ96QU6 501 aa16■□□□□ 0.15
TSC2-206ENST00000439117 CACYBPQ9HB71 228 aaKnown RBP16■□□□□ 0.15
TSC2-206ENST00000439117 SLC40A1Q9NP59 571 aa16■□□□□ 0.15
TSC2-206ENST00000439117 KMT5AQ9NQR1 393 aa16■□□□□ 0.15
TSC2-206ENST00000439117 EHD2Q9NZN4 543 aa16■□□□□ 0.15
TSC2-206ENST00000439117 CEP72Q9P209 647 aa16■□□□□ 0.15
TSC2-206ENST00000439117 PFDN6O15212 129 aa16■□□□□ 0.15
TSC2-206ENST00000439117 BASP1P80723 227 aaKnown RBP16■□□□□ 0.15
TSC2-206ENST00000439117 NEDD1Q8NHV4 660 aa16■□□□□ 0.15
TSC2-206ENST00000439117 CPVLQ9H3G5 476 aa16■□□□□ 0.15
TSC2-206ENST00000439117 NOC2LQ9Y3T9 749 aaKnown RBP16■□□□□ 0.15
TSC2-206ENST00000439117 PLA2G4BP0C869 781 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 GRM4Q14833 912 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 RARS2Q5T160 578 aaKnown RBP15.99■□□□□ 0.15
TSC2-206ENST00000439117 EEPD1Q7L9B9 569 aa15.99■□□□□ 0.15
TSC2-206ENST00000439117 MMS19Q96T76 1030 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms