RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 CHMP4BP1P59074 171 aa10.24□□□□□ -0.77
LSMEM1-202ENST00000439068 PAK2Q13177 524 aa10.24□□□□□ -0.77
LSMEM1-202ENST00000439068 GRB10Q13322 594 aa10.24□□□□□ -0.77
LSMEM1-202ENST00000439068 PPP2R5BQ15173 497 aa10.24□□□□□ -0.77
LSMEM1-202ENST00000439068 CCDC96Q2M329 555 aa10.24□□□□□ -0.77
LSMEM1-202ENST00000439068 MUM1L1Q5H9M0 696 aa10.24□□□□□ -0.77
LSMEM1-202ENST00000439068 CAGE1Q8TC20 777 aa10.24□□□□□ -0.77
LSMEM1-202ENST00000439068 SCFD2Q8WU76 684 aa10.24□□□□□ -0.77
LSMEM1-202ENST00000439068 DCAF4Q8WV16 495 aa10.24□□□□□ -0.77
LSMEM1-202ENST00000439068 BTBD6Q96KE9 485 aa10.24□□□□□ -0.77
LSMEM1-202ENST00000439068 TCF20Q9UGU0 1960 aaKnown RBP10.24□□□□□ -0.77
LSMEM1-202ENST00000439068 PI4K2BG5E9Z4 385 aa10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 M0R082 166 aa10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 TXNP10599 105 aaKnown RBP10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 ALADP13716 330 aa10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 ALDH5A1P51649 535 aaPredicted RBP10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 AFF1P51825 1210 aaKnown RBP10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 SNAP25P60880 206 aa10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 PPARAQ07869 468 aa10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 PTGISQ16647 500 aa10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 TTBK2Q6IQ55 1244 aa10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 ZNF417Q8TAU3 575 aa10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 WHAMMQ8TF30 809 aa10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 SREK1Q8WXA9 508 aaKnown RBP10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 ZNF587Q96SQ5 575 aaPredicted RBP10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 RAD9AQ99638 391 aa10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 CTNNA3Q9UI47 895 aa10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 PRRC2BQ5JSZ5 2229 aaKnown RBP10.23□□□□□ -0.77
LSMEM1-202ENST00000439068 ABHD14A-ACY1A0A1B0GW23 586 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 LINC01387J3KSC0 135 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 SMARCA5O60264 1052 aaPredicted RBP10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 RANBP6O60518 1105 aaKnown RBP10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 B3GALT4O96024 378 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 PF4P02776 101 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 TFE3P19532 575 aaPredicted RBP10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 CALML3P27482 149 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 IKBKEQ14164 716 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 PCNX4Q63HM2 1172 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 KRT40Q6A162 431 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 LYPD4Q6UWN0 246 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 RNF207Q6ZRF8 634 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 CHSY3Q70JA7 882 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 DNERQ8NFT8 737 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 AFAP1L1Q8TED9 768 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 VWCEQ96DN2 955 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 UIMC1Q96RL1 719 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 TGS1Q96RS0 853 aaKnown RBP10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 SPON2Q9BUD6 331 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 EPB41L4AQ9HCS5 686 aaPredicted RBP10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 PCDHB5Q9Y5E4 795 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 PLIN4Q96Q06 1357 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 CHD7Q9P2D1 2997 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 XIRP2A4UGR9 3374 aa10.22□□□□□ -0.77
LSMEM1-202ENST00000439068 MCM3APO60318 1980 aa10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 EPOPA6NHQ4 379 aa10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 PRR33A8MZF0 331 aa10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 M0R2C6 588 aa10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 OIP5O43482 229 aa10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 SELPP16109 830 aa10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 CASTP20810 708 aaKnown RBP10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 BMP6P22004 513 aa10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 PTGS1P23219 599 aa10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 EIF4A3P38919 411 aaKnown RBP10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 TMEM63BQ5T3F8 832 aa10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 SYDE2Q5VT97 1194 aa10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 CNKSR3Q6P9H4 555 aa10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 FBXL19Q6PCT2 694 aa10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 GRIN3AQ8TCU5 1115 aa10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 RANBP17Q9H2T7 1088 aaKnown RBP10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 TOMM22Q9NS69 142 aa10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 FAM50BQ9Y247 325 aa10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 DDX49Q9Y6V7 483 aaKnown RBP10.21□□□□□ -0.77
LSMEM1-202ENST00000439068 NFIBO00712 420 aa10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 TOP1P11387 765 aaKnown RBP10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 GARTP22102 1010 aa10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 SLC16A2P36021 539 aa10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 WDR5P61964 334 aaKnown RBP10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 PPP2R3AQ06190 1150 aa10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 PTPROQ16827 1216 aa10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 BTNL9Q6UXG8 535 aa10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 AGMOQ6ZNB7 445 aa10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 C7orf31Q8N865 590 aa10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 SLC7A3Q8WY07 619 aa10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 RHOVQ96L33 236 aa10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 DRC1Q96MC2 740 aa10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 FSD1Q9BTV5 496 aa10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 MAF1Q9H063 256 aa10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 UBE2ZQ9H832 354 aaPredicted RBP10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 INSL6Q9Y581 213 aa10.2□□□□□ -0.78
LSMEM1-202ENST00000439068 TTC41PQ6P2S7 1318 aa10.19□□□□□ -0.78
LSMEM1-202ENST00000439068 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.19□□□□□ -0.78
LSMEM1-202ENST00000439068 FAM86C2PA6NEL3 165 aa10.19□□□□□ -0.78
LSMEM1-202ENST00000439068 H3BRJ5 948 aa10.19□□□□□ -0.78
LSMEM1-202ENST00000439068 LPXNO60711 386 aa10.19□□□□□ -0.78
LSMEM1-202ENST00000439068 LILRB5O75023 590 aa10.19□□□□□ -0.78
LSMEM1-202ENST00000439068 GJB5O95377 273 aa10.19□□□□□ -0.78
LSMEM1-202ENST00000439068 GH1P01241 217 aa10.19□□□□□ -0.78
LSMEM1-202ENST00000439068 CELA2BP08218 269 aaPredicted RBP10.19□□□□□ -0.78
LSMEM1-202ENST00000439068 DNAJA1P31689 397 aaKnown RBP10.19□□□□□ -0.78
LSMEM1-202ENST00000439068 ERVK-21P61565 698 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 278.8 ms