RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 EPHB1P54762 984 aa5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 PPARAQ07869 468 aa5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 SURF1Q15526 300 aa5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 CLUL1Q15846 466 aa5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 PTPN21Q16825 1174 aa5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 GJC2Q5T442 439 aaPredicted RBP5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 LMBR1LQ6UX01 489 aa5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 PLEKHH3Q7Z736 793 aa5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 ZBTB46Q86UZ6 589 aa5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 PNMA8AQ86V59 439 aaPredicted RBP5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 GLB1L2Q8IW92 636 aa5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 CMIPQ8IY22 773 aa5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 ADGRG2Q8IZP9 1017 aa5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 CBARPQ8N350 705 aaPredicted RBP5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 TGFBRAP1Q8WUH2 860 aa5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 FATE1Q969F0 183 aa5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 KCTD10Q9H3F6 313 aa5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 ZBTB21Q9ULJ3 1066 aa5.06□□□□□ -1.6
LSM1P1-201ENST00000438629 TNKSO95271 1327 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 NOBOXO60393 691 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 SNUPNO95149 360 aaKnown RBP5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 LPLP06858 475 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 ZSCAN22P10073 491 aaPredicted RBP5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 CSF2RBP32927 897 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 IARSP41252 1262 aaKnown RBP5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 ANTXR2P58335 489 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 TTF1Q15361 905 aaPredicted RBP5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 ZNF827Q17R98 1081 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 MUM1Q2TAK8 710 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 TOR2AQ5JU69 321 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 ODR4Q5SWX8 454 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 KCNK18Q7Z418 384 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 RALYLQ86SE5 291 aaKnown RBP5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 LGI4Q8N135 537 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 PPP1R14CQ8TAE6 165 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 SMAD5Q99717 465 aaKnown RBP5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 OR10A2Q9H208 303 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 IFT122Q9HBG6 1241 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 CCM2LQ9NUG4 571 aaPredicted RBP5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 USP40Q9NVE5 1235 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 DPP7Q9UHL4 492 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 EDARQ9UNE0 448 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 GPR45Q9Y5Y3 372 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 CDY2AQ9Y6F7 541 aa5.05□□□□□ -1.6
LSM1P1-201ENST00000438629 MT-CO1P00395 513 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 VCAM1P19320 739 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 AGXTP21549 392 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 RECQLP46063 649 aaPredicted RBP5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 MTNR1BP49286 362 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 MRE11P49959 708 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 MEF2AQ02078 507 aaPredicted RBP5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 TRIM25Q14258 630 aaKnown RBP5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 PCOLCEQ15113 449 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 ABCB5Q2M3G0 1257 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 NT5DC1Q5TFE4 455 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 EFCAB2Q5VUJ9 269 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 USP30Q70CQ3 517 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 LYSMD2Q8IV50 215 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 SLC41A1Q8IVJ1 513 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 KBTBD2Q8IY47 623 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 BCL6BQ8N143 479 aaPredicted RBP5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 MARCH10Q8NA82 808 aaPredicted RBP5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 GCDHQ92947 438 aaPredicted RBP5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 NKD2Q969F2 451 aaPredicted RBP5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 QRSL1Q9H0R6 528 aaKnown RBP5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 MSL2Q9HCI7 577 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 JADE2Q9NQC1 790 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 ZNF277Q9NRM2 450 aaPredicted RBP5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 AASDHPPTQ9NRN7 309 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 TCEAL9Q9UHQ7 104 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 FAM184BQ9ULE4 1060 aa5.04□□□□□ -1.6
LSM1P1-201ENST00000438629 TTBK1Q5TCY1 1321 aaPredicted RBP5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 XPOTO43592 962 aaKnown RBP5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 SEC24DO94855 1032 aaPredicted RBP5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 STAT5BP51692 787 aa5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 SRSF2Q01130 221 aaKnown RBP5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 ACAP2Q15057 778 aa5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 MBNL2Q5VZF2 373 aaKnown RBP5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 C1QL4Q86Z23 238 aa5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 UNC5BQ8IZJ1 945 aa5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 SLC7A6OSQ96CW6 309 aaPredicted RBP5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 MBD6Q96DN6 1003 aa5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 UIMC1Q96RL1 719 aa5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 ACE2Q9BYF1 805 aaPredicted RBP5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 EVLQ9UI08 416 aaPredicted RBP5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 DNAI1Q9UI46 699 aa5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 MAGEL2Q9UJ55 1249 aa5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 INVSQ9Y283 1065 aa5.03□□□□□ -1.6
LSM1P1-201ENST00000438629 A0A0A6YYK5 440 aaPredicted RBP5.02□□□□□ -1.61
LSM1P1-201ENST00000438629 PMS2P1A4D2B8 440 aa5.02□□□□□ -1.61
LSM1P1-201ENST00000438629 B4GALT4O60513 344 aa5.02□□□□□ -1.61
LSM1P1-201ENST00000438629 BMP7P18075 431 aa5.02□□□□□ -1.61
LSM1P1-201ENST00000438629 CDK17Q00537 523 aa5.02□□□□□ -1.61
LSM1P1-201ENST00000438629 MGAT5Q09328 741 aa5.02□□□□□ -1.61
LSM1P1-201ENST00000438629 NFYCQ13952 458 aa5.02□□□□□ -1.61
LSM1P1-201ENST00000438629 PCBP2Q15366 365 aaKnown RBP eCLIP5.02□□□□□ -1.61
LSM1P1-201ENST00000438629 C19orf54Q5BKX5 351 aa5.02□□□□□ -1.61
LSM1P1-201ENST00000438629 MUM1L1Q5H9M0 696 aa5.02□□□□□ -1.61
LSM1P1-201ENST00000438629 AGBL4Q5VU57 503 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms