RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 INO80BQ9C086 356 aaPredicted RBP20.34■□□□□ 0.85
HDAC6-208ENST00000438518 GPRC5CQ9NQ84 441 aa20.34■□□□□ 0.85
HDAC6-208ENST00000438518 PANK4Q9NVE7 773 aa20.34■□□□□ 0.85
HDAC6-208ENST00000438518 TBX21Q9UL17 535 aa20.34■□□□□ 0.85
HDAC6-208ENST00000438518 TRPV2Q9Y5S1 764 aa20.34■□□□□ 0.85
HDAC6-208ENST00000438518 SIP14410 1827 aa20.33■□□□□ 0.85
HDAC6-208ENST00000438518 NPHP3-ACAD11A0A0J9YXS1 232 aa20.33■□□□□ 0.85
HDAC6-208ENST00000438518 PHKA2P46019 1235 aa20.33■□□□□ 0.85
HDAC6-208ENST00000438518 CRYBB1P53674 252 aaPredicted RBP20.33■□□□□ 0.85
HDAC6-208ENST00000438518 RAD51AP2Q09MP3 1159 aa20.33■□□□□ 0.85
HDAC6-208ENST00000438518 PSMD2Q13200 908 aa20.33■□□□□ 0.85
HDAC6-208ENST00000438518 ALCAMQ13740 583 aa20.33■□□□□ 0.85
HDAC6-208ENST00000438518 ODR4Q5SWX8 454 aa20.33■□□□□ 0.85
HDAC6-208ENST00000438518 GRAMD1CQ8IYS0 662 aa20.33■□□□□ 0.85
HDAC6-208ENST00000438518 MYCT1Q8N699 235 aa20.33■□□□□ 0.85
HDAC6-208ENST00000438518 USP38Q8NB14 1042 aa20.33■□□□□ 0.85
HDAC6-208ENST00000438518 SPATA20Q8TB22 786 aa20.33■□□□□ 0.85
HDAC6-208ENST00000438518 SMARCE1Q969G3 411 aa20.33■□□□□ 0.85
HDAC6-208ENST00000438518 CELF4Q9BZC1 486 aaKnown RBP20.33■□□□□ 0.85
HDAC6-208ENST00000438518 BLZF1Q9H2G9 400 aa20.33■□□□□ 0.85
HDAC6-208ENST00000438518 HIPK3Q9H422 1215 aa20.33■□□□□ 0.85
HDAC6-208ENST00000438518 ST6GALNAC4Q9H4F1 302 aa20.33■□□□□ 0.85
HDAC6-208ENST00000438518 TMEM39AQ9NV64 488 aa20.33■□□□□ 0.85
HDAC6-208ENST00000438518 RSPH10B2B2RC85 870 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 KIAA0355O15063 1070 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 TRAK2O60296 914 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 GPR32O75388 356 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 VTNP04004 478 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 RPN1P04843 607 aaKnown RBP20.32■□□□□ 0.84
HDAC6-208ENST00000438518 RSPH10BP0C881 870 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 SELPP16109 830 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 EFNA5P52803 228 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 PEX3P56589 373 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 NLRP11P59045 1033 aaKnown RBP20.32■□□□□ 0.84
HDAC6-208ENST00000438518 EHHADHQ08426 723 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 MGAT3Q09327 533 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 CAPSQ13938 189 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 NT5DC1Q5TFE4 455 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 CDCA2Q69YH5 1023 aaPredicted RBP20.32■□□□□ 0.84
HDAC6-208ENST00000438518 STXBP4Q6ZWJ1 553 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 ZBTB8OSQ8IWT0 167 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 FAM178BQ8IXR5 827 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 RNF149Q8NC42 400 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 ASAP3Q8TDY4 903 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 WNT8BQ93098 351 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 NOC4LQ9BVI4 516 aaKnown RBP20.32■□□□□ 0.84
HDAC6-208ENST00000438518 GCOM2Q9BZD3 368 aaPredicted RBP20.32■□□□□ 0.84
HDAC6-208ENST00000438518 ZHX3Q9H4I2 956 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 KMT5AQ9NQR1 393 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 PRKAG2Q9UGJ0 569 aa20.32■□□□□ 0.84
HDAC6-208ENST00000438518 RHOBTB3O94955 611 aa20.31■□□□□ 0.84
HDAC6-208ENST00000438518 PRR29P0C7W0 189 aa20.31■□□□□ 0.84
HDAC6-208ENST00000438518 NPTX2P47972 431 aa20.31■□□□□ 0.84
HDAC6-208ENST00000438518 NCKAP1LP55160 1127 aa20.31■□□□□ 0.84
HDAC6-208ENST00000438518 CACNB1Q02641 598 aaPredicted RBP20.31■□□□□ 0.84
HDAC6-208ENST00000438518 COASYQ13057 564 aa20.31■□□□□ 0.84
HDAC6-208ENST00000438518 PNOCQ13519 176 aa20.31■□□□□ 0.84
HDAC6-208ENST00000438518 HERC4Q5GLZ8 1057 aaPredicted RBP20.31■□□□□ 0.84
HDAC6-208ENST00000438518 CCDC183Q5T5S1 534 aa20.31■□□□□ 0.84
HDAC6-208ENST00000438518 LRRC8DQ7L1W4 858 aa20.31■□□□□ 0.84
HDAC6-208ENST00000438518 SRGAP1Q7Z6B7 1085 aa20.31■□□□□ 0.84
HDAC6-208ENST00000438518 DEPTORQ8TB45 409 aa20.31■□□□□ 0.84
HDAC6-208ENST00000438518 NLRP7Q8WX94 980 aa20.31■□□□□ 0.84
HDAC6-208ENST00000438518 HVCN1Q96D96 273 aa20.31■□□□□ 0.84
HDAC6-208ENST00000438518 NLRP4Q96MN2 994 aa20.31■□□□□ 0.84
HDAC6-208ENST00000438518 SCLT1Q96NL6 688 aa20.31■□□□□ 0.84
HDAC6-208ENST00000438518 EXOC1Q9NV70 894 aa20.31■□□□□ 0.84
HDAC6-208ENST00000438518 CDY2AQ9Y6F7 541 aa20.31■□□□□ 0.84
HDAC6-208ENST00000438518 LRRIQ4A6NIV6 560 aa20.3■□□□□ 0.84
HDAC6-208ENST00000438518 KLRC4O43908 158 aa20.3■□□□□ 0.84
HDAC6-208ENST00000438518 EIF4BP23588 611 aaKnown RBP20.3■□□□□ 0.84
HDAC6-208ENST00000438518 RFC2P35250 354 aa20.3■□□□□ 0.84
HDAC6-208ENST00000438518 SARSP49591 514 aaKnown RBP20.3■□□□□ 0.84
HDAC6-208ENST00000438518 PTENP60484 403 aa20.3■□□□□ 0.84
HDAC6-208ENST00000438518 ZNF618Q5T7W0 954 aa20.3■□□□□ 0.84
HDAC6-208ENST00000438518 TRIML1Q8N9V2 468 aa20.3■□□□□ 0.84
HDAC6-208ENST00000438518 ADAMTS10Q9H324 1103 aa20.3■□□□□ 0.84
HDAC6-208ENST00000438518 TMEM134Q9H6X4 195 aa20.3■□□□□ 0.84
HDAC6-208ENST00000438518 KIAA1468Q9P260 1216 aa20.3■□□□□ 0.84
HDAC6-208ENST00000438518 ARHGAP28Q9P2N2 729 aa20.3■□□□□ 0.84
HDAC6-208ENST00000438518 PCDHA5Q9Y5H7 936 aa20.3■□□□□ 0.84
HDAC6-208ENST00000438518 A0A087WZ62 844 aa20.29■□□□□ 0.84
HDAC6-208ENST00000438518 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.29■□□□□ 0.84
HDAC6-208ENST00000438518 CCDC169A6NNP5 214 aa20.29■□□□□ 0.84
HDAC6-208ENST00000438518 SFI1A8K8P3 1242 aa20.29■□□□□ 0.84
HDAC6-208ENST00000438518 EVI5O60447 810 aa20.29■□□□□ 0.84
HDAC6-208ENST00000438518 SRGAP2CP0DJJ0 459 aa20.29■□□□□ 0.84
HDAC6-208ENST00000438518 CASP1P29466 404 aa20.29■□□□□ 0.84
HDAC6-208ENST00000438518 KIZQ2M2Z5 673 aa20.29■□□□□ 0.84
HDAC6-208ENST00000438518 KMT5BQ4FZB7 885 aa20.29■□□□□ 0.84
HDAC6-208ENST00000438518 FAM26FQ5R3K3 315 aa20.29■□□□□ 0.84
HDAC6-208ENST00000438518 RBM43Q6ZSC3 357 aaKnown RBP20.29■□□□□ 0.84
HDAC6-208ENST00000438518 SFR1Q86XK3 245 aa20.29■□□□□ 0.84
HDAC6-208ENST00000438518 BSNDQ8WZ55 320 aa20.29■□□□□ 0.84
HDAC6-208ENST00000438518 PRIMPOLQ96LW4 560 aa20.29■□□□□ 0.84
HDAC6-208ENST00000438518 FDXACB1Q9BRP7 624 aaPredicted RBP20.29■□□□□ 0.84
HDAC6-208ENST00000438518 MRPL44Q9H9J2 332 aaKnown RBP20.29■□□□□ 0.84
HDAC6-208ENST00000438518 IFT122Q9HBG6 1241 aa20.29■□□□□ 0.84
HDAC6-208ENST00000438518 UBE4BO95155 1302 aa20.28■□□□□ 0.84
HDAC6-208ENST00000438518 LETM1O95202 739 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms