RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 LUC7L3O95232 432 aaKnown RBP7.18□□□□□ -1.26
CSDE1-205ENST00000438362 GGPS1O95749 300 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 GLI1P08151 1106 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 KRT19P08727 400 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 BRDTQ58F21 947 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-205ENST00000438362 CFAP157Q5JU67 520 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 SLC10A5Q5PT55 438 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 RC3H1Q5TC82 1133 aaKnown RBP7.18□□□□□ -1.26
CSDE1-205ENST00000438362 FOXR1Q6PIV2 292 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 TXNRD3Q86VQ6 643 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 PARP9Q8IXQ6 854 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 CCHCR1Q8TD31 782 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 AENQ8WTP8 325 aaKnown RBP7.18□□□□□ -1.26
CSDE1-205ENST00000438362 SLIT3O75094 1523 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 EMSYQ7Z589 1322 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 NRXN3Q9Y4C0 1643 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 DCCP43146 1447 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 SGK1O00141 431 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 WNT7AO00755 349 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 KLRC4O43908 158 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 FUT2Q10981 343 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 PPP1R2P3Q6NXS1 205 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 TAB3Q8N5C8 712 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-205ENST00000438362 BANK1Q8NDB2 785 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 TPCN2Q8NHX9 752 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 MYCBPAPQ8TBZ2 947 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 NUP85Q9BW27 656 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 PACSIN1Q9BY11 444 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 PITPNM3Q9BZ71 974 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 CELF4Q9BZC1 486 aaKnown RBP7.18□□□□□ -1.26
CSDE1-205ENST00000438362 APEX2Q9UBZ4 518 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 LCMT1Q9UIC8 334 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 INTUQ9ULD6 942 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 FMN2Q9NZ56 1722 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 PHF20L1A8MW92 1017 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 RNF225M0QZC1 329 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-205ENST00000438362 STAM2O75886 525 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 TMEM253P0C7T8 217 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 BRAFP15056 766 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 NPR1P16066 1061 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 CA4P22748 312 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 POLGP54098 1239 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-205ENST00000438362 HDLBPQ00341 1268 aaKnown RBP7.18□□□□□ -1.26
CSDE1-205ENST00000438362 CAV1Q03135 178 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 TTLL12Q14166 644 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-205ENST00000438362 PPP2R5AQ15172 486 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 ZNF662Q6ZS27 426 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 SRRM1Q8IYB3 904 aaKnown RBP7.18□□□□□ -1.26
CSDE1-205ENST00000438362 TBC1D16Q8TBP0 767 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 CNKSR1Q969H4 720 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 SEC16BQ96JE7 1060 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 XPO6Q96QU8 1125 aaKnown RBP7.18□□□□□ -1.26
CSDE1-205ENST00000438362 TUFT1Q9NNX1 390 aa7.18□□□□□ -1.26
CSDE1-205ENST00000438362 NOP53Q9NZM5 478 aaKnown RBP7.18□□□□□ -1.26
CSDE1-205ENST00000438362 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.18□□□□□ -1.26
CSDE1-205ENST00000438362 CYTH3O43739 400 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 AGTP01019 485 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 KRT1P04264 644 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 HNRNPH1P31943 449 aaKnown RBP7.17□□□□□ -1.26
CSDE1-205ENST00000438362 MEI1Q5TIA1 1274 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 PODNQ7Z5L7 613 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 TRIM59Q8IWR1 403 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 RILPQ96NA2 401 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 ERP44Q9BS26 406 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 MLXIPLQ9NP71 852 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 ANKFY1Q9P2R3 1169 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 CFAP73A6NFT4 308 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 IPO5O00410 1097 aaKnown RBP7.17□□□□□ -1.26
CSDE1-205ENST00000438362 PJA2O43164 708 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 RNF8O76064 485 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 HSPA1LP34931 641 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 RNASELQ05823 741 aaKnown RBP7.17□□□□□ -1.26
CSDE1-205ENST00000438362 LRRC14Q15048 493 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 EPHA7Q15375 998 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 IL17AQ16552 155 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 CCDC14Q49A88 953 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 CATSPER3Q86XQ3 398 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 JAMLQ86YT9 394 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 CCDC110Q8TBZ0 833 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 PNMA5Q96PV4 448 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 SLC4A9Q96Q91 983 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 LXNQ9BS40 222 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 MKNK1Q9BUB5 465 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 HEMGNQ9BXL5 484 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 CARD9Q9H257 536 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 RIOX1Q9H6W3 641 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 TMEM51Q9NW97 253 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 SEPT9Q9UHD8 586 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-205ENST00000438362 TRPC6Q9Y210 931 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 REXO2Q9Y3B8 237 aaKnown RBP7.17□□□□□ -1.26
CSDE1-205ENST00000438362 BCL9O00512 1426 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 COL5A2P05997 1499 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-205ENST00000438362 RCCD1A6NED2 376 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 ZSCAN5CA6NGD5 496 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-205ENST00000438362 ZNF233A6NK53 670 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 RASA4BC9J798 803 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 RASA4O43374 803 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 PHF2O75151 1096 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 SYF2O95926 243 aaKnown RBP7.17□□□□□ -1.26
CSDE1-205ENST00000438362 CHN1P15882 459 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms