RNA–Protein interactions for RNA: ENST00000438322.1

LINC00475-207, long intergenic non-protein coding RNA 475, humanhuman

TSL 3 BASIC

Gene LINC00475, Length 424 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-207ENST00000438322 PRPHP41219 470 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 DNM2P50570 870 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 GPC3P51654 580 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 NPEPPSP55786 919 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 PSMC5P62195 406 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 PPP2R5CQ13362 524 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 CTTNQ14247 550 aaKnown RBP11.74□□□□□ -0.53
LINC00475-207ENST00000438322 SF3A1Q15459 793 aaKnown RBP11.74□□□□□ -0.53
LINC00475-207ENST00000438322 ATL3Q6DD88 541 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 PTCRAQ6ISU1 281 aaPredicted RBP11.74□□□□□ -0.53
LINC00475-207ENST00000438322 DTHD1Q6ZMT9 781 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 SLC24A5Q71RS6 500 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 RBM23Q86U06 439 aaKnown RBP11.74□□□□□ -0.53
LINC00475-207ENST00000438322 KSR1Q8IVT5 923 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 THNSL1Q8IYQ7 743 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 ABI1Q8IZP0 508 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 MICAL1Q8TDZ2 1067 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 CLP1Q92989 425 aaKnown RBP11.74□□□□□ -0.53
LINC00475-207ENST00000438322 IPO9Q96P70 1041 aaKnown RBP11.74□□□□□ -0.53
LINC00475-207ENST00000438322 MTMR9Q96QG7 549 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 FDXACB1Q9BRP7 624 aaPredicted RBP11.74□□□□□ -0.53
LINC00475-207ENST00000438322 TMEM60Q9H2L4 133 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 SUCLA2Q9P2R7 463 aaPredicted RBP11.74□□□□□ -0.53
LINC00475-207ENST00000438322 VAV3Q9UKW4 847 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 CFAP45Q9UL16 551 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 PCDHGC5Q9Y5F6 944 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 STK24Q9Y6E0 443 aa11.74□□□□□ -0.53
LINC00475-207ENST00000438322 C9IYK1 514 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 LINC01565O15544 149 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 ITGB1P05556 798 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 IL9P15248 144 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 EIF4BP23588 611 aaKnown RBP11.73□□□□□ -0.53
LINC00475-207ENST00000438322 DNAJB1P25685 340 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 CA8P35219 290 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 TECP42680 631 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 QARSP47897 775 aaKnown RBP11.73□□□□□ -0.53
LINC00475-207ENST00000438322 POLGP54098 1239 aaPredicted RBP11.73□□□□□ -0.53
LINC00475-207ENST00000438322 ATP2C1P98194 919 aaPredicted RBP11.73□□□□□ -0.53
LINC00475-207ENST00000438322 CEBPZQ03701 1054 aaKnown RBP11.73□□□□□ -0.53
LINC00475-207ENST00000438322 PKP1Q13835 747 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 EPHA7Q15375 998 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 FOXD4L6Q3SYB3 417 aaPredicted RBP11.73□□□□□ -0.53
LINC00475-207ENST00000438322 ARL6IP4Q66PJ3 421 aaKnown RBP11.73□□□□□ -0.53
LINC00475-207ENST00000438322 FOXD4L3Q6VB84 417 aaPredicted RBP11.73□□□□□ -0.53
LINC00475-207ENST00000438322 ANO5Q75V66 913 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 LINC01465Q8N7H1 131 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 C4orf32Q8N8J7 132 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 ZNF579Q8NAF0 562 aaKnown RBP11.73□□□□□ -0.53
LINC00475-207ENST00000438322 ERMNQ8TAM6 284 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 POF1BQ8WVV4 589 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 DYDC2Q96IM9 177 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 CEP170P1Q96L14 293 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 CCDC43Q96MW1 224 aaKnown RBP11.73□□□□□ -0.53
LINC00475-207ENST00000438322 LXNQ9BS40 222 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 GCOM2Q9BZD3 368 aaPredicted RBP11.73□□□□□ -0.53
LINC00475-207ENST00000438322 ADAMTS10Q9H324 1103 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 TYW1Q9NV66 732 aaKnown RBP11.73□□□□□ -0.53
LINC00475-207ENST00000438322 RGL1Q9NZL6 768 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 CIZ1Q9ULV3 898 aaPredicted RBP11.73□□□□□ -0.53
LINC00475-207ENST00000438322 PLAGL2Q9UPG8 496 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 PCDHB12Q9Y5F1 795 aa11.73□□□□□ -0.53
LINC00475-207ENST00000438322 MUC3AQ02505 3323 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 C5orf67F2Z3F1 127 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 LINC00271P0C7V0 271 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 SRGAP2CP0DJJ0 459 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 DARSP14868 501 aaKnown RBP11.72□□□□□ -0.53
LINC00475-207ENST00000438322 IRS1P35568 1242 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 PBX3P40426 434 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 NDUFV1P49821 464 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 HYAL1Q12794 435 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 PDIA5Q14554 519 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 STK38Q15208 465 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 TARBP2Q15633 366 aaKnown RBP11.72□□□□□ -0.53
LINC00475-207ENST00000438322 XKR9Q5GH70 373 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 TWF2Q6IBS0 349 aaKnown RBP11.72□□□□□ -0.53
LINC00475-207ENST00000438322 FAM173BQ6P4H8 233 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 CATSPER4Q7RTX7 472 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 TPH2Q8IWU9 490 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 COLGALT1Q8NBJ5 622 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.72□□□□□ -0.53
LINC00475-207ENST00000438322 HELQQ8TDG4 1101 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 TMEM143Q96AN5 459 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 LMAN2LQ9H0V9 348 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 CYP26B1Q9NR63 512 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 AAASQ9NRG9 546 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 RNF216Q9NWF9 866 aaPredicted RBP11.72□□□□□ -0.53
LINC00475-207ENST00000438322 TMEM161AQ9NX61 479 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 WRAP73Q9P2S5 460 aaPredicted RBP11.72□□□□□ -0.53
LINC00475-207ENST00000438322 PIN4Q9Y237 131 aaKnown RBP11.72□□□□□ -0.53
LINC00475-207ENST00000438322 CLIC4Q9Y696 253 aa11.72□□□□□ -0.53
LINC00475-207ENST00000438322 A0A087WWV3 80 aa11.71□□□□□ -0.53
LINC00475-207ENST00000438322 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.71□□□□□ -0.53
LINC00475-207ENST00000438322 ZBTB39O15060 712 aa11.71□□□□□ -0.53
LINC00475-207ENST00000438322 STBD1O95210 358 aa11.71□□□□□ -0.53
LINC00475-207ENST00000438322 P4HBP07237 508 aaKnown RBP11.71□□□□□ -0.53
LINC00475-207ENST00000438322 NCLP19338 710 aaKnown RBP11.71□□□□□ -0.53
LINC00475-207ENST00000438322 SFPQP23246 707 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC00475-207ENST00000438322 NRIP1P48552 1158 aa11.71□□□□□ -0.53
LINC00475-207ENST00000438322 FXR2P51116 673 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC00475-207ENST00000438322 DSC3Q14574 896 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms