RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 ARNTL2Q8WYA1 636 aa9.59□□□□□ -0.87
HERPUD2-206ENST00000438224 TNPO1Q92973 898 aaKnown RBP9.59□□□□□ -0.87
HERPUD2-206ENST00000438224 MTMR9Q96QG7 549 aa9.59□□□□□ -0.87
HERPUD2-206ENST00000438224 OSMRQ99650 979 aa9.59□□□□□ -0.87
HERPUD2-206ENST00000438224 ZBED2Q9BTP6 218 aa9.59□□□□□ -0.87
HERPUD2-206ENST00000438224 NIFKQ9BYG3 293 aaKnown RBP9.59□□□□□ -0.87
HERPUD2-206ENST00000438224 ADAMTS10Q9H324 1103 aa9.59□□□□□ -0.87
HERPUD2-206ENST00000438224 BRMS1Q9HCU9 246 aa9.59□□□□□ -0.87
HERPUD2-206ENST00000438224 GINS2Q9Y248 185 aa9.59□□□□□ -0.87
HERPUD2-206ENST00000438224 SQORQ9Y6N5 450 aa9.59□□□□□ -0.87
HERPUD2-206ENST00000438224 MYH11P35749 1972 aa9.59□□□□□ -0.87
HERPUD2-206ENST00000438224 ST18O60284 1047 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 NEMFO60524 1076 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 RPLP2P05387 115 aaKnown RBP9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 ATP2B1P20020 1258 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 GATMP50440 423 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 NLRP11P59045 1033 aaKnown RBP9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 ERVK-21P61565 698 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 PSMC5P62195 406 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 HMGN5P82970 282 aaKnown RBP9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 CYP4A11Q02928 519 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 PAK2Q13177 524 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 GRB10Q13322 594 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 TRIM29Q14134 588 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 CTTNQ14247 550 aaKnown RBP9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 EPHA7Q15375 998 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 CALCRLQ16602 461 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 DYDC2Q96IM9 177 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 GAS2L1Q99501 681 aaPredicted RBP9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 NAP1L4Q99733 375 aaKnown RBP9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 LXNQ9BS40 222 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 C17orf80Q9BSJ5 609 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 BACH2Q9BYV9 841 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 FOXP1Q9H334 677 aaPredicted RBP9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 IGSF5Q9NSI5 407 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 NRBP2Q9NSY0 501 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 MTUS1Q9ULD2 1270 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 CEP131Q9UPN4 1083 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 MYH15Q9Y2K3 1946 aa9.58□□□□□ -0.88
HERPUD2-206ENST00000438224 TRIP11Q15643 1979 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 A0A087WWV3 80 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 M0QZ92 97 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 MAGEB2O15479 319 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 CSDE1O75534 798 aaKnown RBP9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 FGFR4P22455 802 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 IGFBP4P22692 258 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 MCM7P33993 719 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 QARSP47897 775 aaKnown RBP9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 TOB1P50616 345 aaPredicted RBP9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 GPC3P51654 580 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 CRYBB1P53674 252 aaPredicted RBP9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 TBC1D8BQ0IIM8 1120 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 NFX1Q12986 1120 aaKnown RBP9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 DSC3Q14574 896 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 ZNF174Q15697 407 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 CCDC85BQ15834 202 aaPredicted RBP9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 NOSTRINQ8IVI9 506 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 SLFN12Q8IYM2 578 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 SLC17A8Q8NDX2 589 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 PPM1EQ8WY54 764 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 ZNF689Q96CS4 500 aaPredicted RBP9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 EIF2AK1Q9BQI3 630 aaKnown RBP9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 ADAM33Q9BZ11 813 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 TTC12Q9H892 705 aaPredicted RBP9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 SUGCTQ9HAC7 445 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 CYP26B1Q9NR63 512 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 ST3GAL5Q9UNP4 418 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 AKT3Q9Y243 479 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 INSL6Q9Y581 213 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 MTCH2Q9Y6C9 303 aa9.57□□□□□ -0.88
HERPUD2-206ENST00000438224 C9IYK1 514 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 HOXA2O43364 376 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 MAFO75444 373 aaPredicted RBP9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 RPS6KA5O75582 802 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 DGKIO75912 1065 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 SLITRK3O94933 977 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 P4HBP07237 508 aaKnown RBP9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 SPATA31C1P0DKV0 1188 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 POU3F3P20264 500 aaPredicted RBP9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 U2AF2P26368 475 aaKnown RBP eCLIP9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 GJB2P29033 226 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 TXKP42681 527 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 SAFBQ15424 915 aaKnown RBP eCLIP9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 TTC38Q5R3I4 469 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 KSR1Q8IVT5 923 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 C4orf19Q8IY42 314 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 C4orf32Q8N8J7 132 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 FAM184AQ8NB25 1140 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 RDH13Q8NBN7 331 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 TGS1Q96RS0 853 aaKnown RBP9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 MAP7D2Q96T17 732 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 YME1L1Q96TA2 773 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 ADAM2Q99965 735 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 HSD17B14Q9BPX1 270 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 DHX33Q9H6R0 707 aaKnown RBP9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 TMEM134Q9H6X4 195 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 UPF2Q9HAU5 1272 aaKnown RBP9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 XPNPEP1Q9NQW7 623 aa9.56□□□□□ -0.88
HERPUD2-206ENST00000438224 RNF19AQ9NV58 838 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms