RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 CUL1Q13616 776 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 SLC10A5Q5PT55 438 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 BSPRYQ5W0U4 402 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 AMIGO3Q86WK7 504 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 RNF10Q8N5U6 811 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 ZNF564Q8TBZ8 553 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 ZNF473Q8WTR7 871 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 TMEM39BQ9GZU3 492 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 ZWILCHQ9H900 591 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 MAGED2Q9UNF1 606 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 SART1O43290 800 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 SHMT1P34896 483 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 PPP4CP60510 307 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 CCDC6Q16204 474 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 GLE1Q53GS7 698 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 CREG2Q8IUH2 290 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 PNMA2Q9UL42 364 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 USP20Q9Y2K6 914 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 PIK3R2O00459 728 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 NOP56O00567 594 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 AKAP3O75969 853 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 KCNJ1P48048 391 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 FMO5P49326 533 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 CLNS1AP54105 237 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 RC3H1Q5TC82 1133 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 HHATQ5VTY9 493 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 CCDC89Q8N998 374 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 NEK9Q8TD19 979 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 MMTAG2Q9BU76 263 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 ANAPC5Q9UJX4 755 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 ATP2A1O14983 1001 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 SETDB1Q15047 1291 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 LONRF1Q17RB8 773 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 NBPF9Q3BBW0 867 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 CENPPQ6IPU0 288 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 NCAPG2Q86XI2 1143 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 MMGT1Q8N4V1 131 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 RNF14Q9UBS8 474 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 EYA4O95677 639 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 TBC1D1Q86TI0 1168 aaPredicted RBP12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 VSIG1Q86XK7 387 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 CCDC197Q8NCU1 140 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 SLC20A1Q8WUM9 679 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 CNKSR1Q969H4 720 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 C18orf8Q96DM3 657 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 AGPAT1Q99943 283 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 WDR11Q9BZH6 1224 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 KCNMA1Q12791 1236 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 WDR93Q6P2C0 686 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 CCDC137Q6PK04 289 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 LDHDQ86WU2 507 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 RNF25Q96BH1 459 aaPredicted RBP12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 CNOT8Q9UFF9 292 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 DENND3A2RUS2 1198 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 HSD17B3P37058 310 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 DGKZQ13574 1117 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 PPP2R5DQ14738 602 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 VPS72Q15906 364 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 ACSF2Q96CM8 615 aaPredicted RBP12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 RASGRF2O14827 1237 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 SPAG7O75391 227 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 NEBLO76041 1014 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 ARP10275 920 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 PPP2R2AP63151 447 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 SNCBQ16143 134 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 LRRC15Q8TF66 581 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 PARP2Q9UGN5 583 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 RAB21Q9UL25 225 aa12.55□□□□□ -0.4
PDLIM5-206ENST00000437932 CLDN3O15551 220 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 KRT1P04264 644 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 DESP17661 470 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 ATP5DP30049 168 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 FBF1Q8TES7 1133 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 LBHD1Q9BQE6 289 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 BCAS3Q9H6U6 928 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 RIOX1Q9H6W3 641 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 HAUS2Q9NVX0 235 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 SIK3Q9Y2K2 1263 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 SYNJ2BP-COX16A0A087WUM0 186 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 MAP2K7O14733 419 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 SRGAP2CP0DJJ0 459 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 GPC5P78333 572 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 FAM47EQ6ZV65 393 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 MCF2L2Q86YR7 1114 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 TPCN2Q8NHX9 752 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 ANKS1AQ92625 1134 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 TMEM206Q9H813 350 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 COX16Q9P0S2 106 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 FZD1Q9UP38 647 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 PDXKO00764 312 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 ZNF263O14978 683 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 PPP1R11O60927 126 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 SWSAP1Q6NVH7 229 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 FMNL3Q8IVF7 1028 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 FAM20AQ96MK3 541 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 MTMR9Q96QG7 549 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 C11orf70Q9BRQ4 267 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 VIPAS39Q9H9C1 493 aa12.54□□□□□ -0.4
PDLIM5-206ENST00000437932 NXF1Q9UBU9 619 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms