RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 UBR3Q6ZT12 1888 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 KLRG2A4D1S0 409 aaPredicted RBP13.39□□□□□ -0.27
TMEM116-202ENST00000437003 FGGP02679 453 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 ADAM9Q13443 819 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 CCDC38Q502W7 563 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 CCDC65Q8IXS2 484 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 MGARPQ8TDB4 240 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 ZBTB10Q96DT7 871 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 YIPF3Q9GZM5 350 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 ABCB11O95342 1321 aa13.39□□□□□ -0.27
TMEM116-202ENST00000437003 IGF2BP3O00425 579 aaKnown RBP eCLIP13.38□□□□□ -0.27
TMEM116-202ENST00000437003 PLTPP55058 493 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 FOXD4Q12950 439 aaPredicted RBP13.38□□□□□ -0.27
TMEM116-202ENST00000437003 ZCWPW2Q504Y3 356 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 CRELD2Q6UXH1 353 aaPredicted RBP13.38□□□□□ -0.27
TMEM116-202ENST00000437003 PIGWQ7Z7B1 504 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 HOOK3Q86VS8 718 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 ERICH1Q86X53 443 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 PROM2Q8N271 834 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 LRRC57Q8N9N7 239 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 KCNV2Q8TDN2 545 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 PARD3BQ8TEW8 1205 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 SYN2Q92777 582 aaPredicted RBP13.38□□□□□ -0.27
TMEM116-202ENST00000437003 TEKT1Q969V4 418 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 L3MBTL3Q96JM7 780 aaPredicted RBP13.38□□□□□ -0.27
TMEM116-202ENST00000437003 CALR3Q96L12 384 aaKnown RBP13.38□□□□□ -0.27
TMEM116-202ENST00000437003 ADAM7Q9H2U9 754 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 SPATS2LQ9NUQ6 558 aaKnown RBP13.38□□□□□ -0.27
TMEM116-202ENST00000437003 RGS16O15492 202 aaPredicted RBP13.38□□□□□ -0.27
TMEM116-202ENST00000437003 NQO1P15559 274 aaKnown RBP13.38□□□□□ -0.27
TMEM116-202ENST00000437003 CASP5P51878 434 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 CACNB3P54284 484 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 NFIAQ12857 509 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 LRRC14Q15048 493 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 ALKBH5Q6P6C2 394 aaKnown RBP13.38□□□□□ -0.27
TMEM116-202ENST00000437003 TPCN2Q8NHX9 752 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 SCFD1Q8WVM8 642 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 GLG1Q92896 1179 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 ECT2Q9H8V3 914 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 SPATA31A6Q5VVP1 1343 aa13.38□□□□□ -0.27
TMEM116-202ENST00000437003 CCDC188H7C350 402 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 KIF3CO14782 793 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 GSTA1P08263 222 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 TAL1P17542 331 aaPredicted RBP13.37□□□□□ -0.27
TMEM116-202ENST00000437003 TCP10Q12799 353 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 ITIH4Q14624 930 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 DCAF17Q5H9S7 520 aaPredicted RBP13.37□□□□□ -0.27
TMEM116-202ENST00000437003 APOBEC3HQ6NTF7 200 aaKnown RBP13.37□□□□□ -0.27
TMEM116-202ENST00000437003 SDR16C5Q8N3Y7 309 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 ATL2Q8NHH9 583 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 BATF3Q9NR55 127 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 FAM114A2Q9NRY5 505 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 MYO3BQ8WXR4 1341 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 ASAP2O43150 1006 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 MYBL1P10243 752 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 SLC9A1P19634 815 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 NR2F2P24468 414 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 INHBEP58166 350 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 NCALDP61601 193 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 PABPC4Q13310 644 aaKnown RBP eCLIP13.37□□□□□ -0.27
TMEM116-202ENST00000437003 SLC27A3Q5K4L6 730 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 TCERG1LQ5VWI1 586 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 DENND2CQ68D51 928 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 ZFPM1Q8IX07 1006 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 ATP8B4Q8TF62 1192 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 SAAL1Q96ER3 474 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 NT5C3AQ9H0P0 336 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 MLXIPLQ9NP71 852 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 NAGPAQ9UK23 515 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 TRIM33Q9UPN9 1127 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 SNX24Q9Y343 169 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 PCDHA1Q9Y5I3 950 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 AFF2P51816 1311 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 CFAP73A6NFT4 308 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 CES2O00748 559 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 MED24O75448 989 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 KRT16P08779 473 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 MMP13P45452 471 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 KCNH2Q12809 1159 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 RIPK1Q13546 671 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 SLC29A2Q14542 456 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 SEPT2Q15019 361 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 C11orf91Q3C1V1 193 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 PRR16Q569H4 304 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 TRIM59Q8IWR1 403 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 EPS8L3Q8TE67 593 aaKnown RBP13.37□□□□□ -0.27
TMEM116-202ENST00000437003 RNF25Q96BH1 459 aaPredicted RBP13.37□□□□□ -0.27
TMEM116-202ENST00000437003 CENPTQ96BT3 561 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 KLHL29Q96CT2 875 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 EPB41L4BQ9H329 900 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 SLITRK6Q9H5Y7 841 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 AIPL1Q9NZN9 384 aa13.37□□□□□ -0.27
TMEM116-202ENST00000437003 PPFIA2O75334 1257 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 RARAP10276 462 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 CYP11B2P19099 503 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 PMS2P54278 862 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 EIF3BP55884 814 aaKnown RBP13.36□□□□□ -0.27
TMEM116-202ENST00000437003 PSMC6P62333 389 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 CYP4A11Q02928 519 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms