RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 OR2W6PQ8NHA6 318 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 C7orf43Q8WVR3 580 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 TUFT1Q9NNX1 390 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 AMACRQ9UHK6 382 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 TMX2Q9Y320 296 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 KIF13BQ9NQT8 1826 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 EIF3DO15371 548 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 GAP43P17677 238 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 SOX5P35711 763 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 TNNC1P63316 161 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 HLTFQ14527 1009 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 ARHGAP44Q17R89 818 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 NAIF1Q69YI7 327 aaPredicted RBP11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 ARHGEF26Q96DR7 871 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 LXNQ9BS40 222 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 ZNF577Q9BSK1 485 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 CELF4Q9BZC1 486 aaKnown RBP11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 PPP1R9AQ9ULJ8 1098 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 FRMPD4Q14CM0 1322 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 GTPBP10A4D1E9 387 aaKnown RBP11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 BUB1BO60566 1050 aaPredicted RBP11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 COPB2P35606 906 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 ZNF131P52739 623 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 MAPK7Q13164 816 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 TBC1D10BQ4KMP7 808 aaPredicted RBP11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 NAA35Q5VZE5 725 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 PHLDB3Q6NSJ2 640 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 ACTRT1Q8TDG2 376 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 BCAS4Q8TDM0 211 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 HOOK2Q96ED9 719 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 SGSM3Q96HU1 749 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 SYT11Q9BT88 431 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.31□□□□□ -0.64e-6■■■■■ 111.8
CLSTN1-203ENST00000435891 DMAC2Q9NW81 257 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 ZBTB21Q9ULJ3 1066 aa11.31□□□□□ -0.6
CLSTN1-203ENST00000435891 EIF3HO15372 352 aaKnown RBP eCLIP11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 RAD17O75943 681 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 STAT1P42224 750 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 UAP1Q16222 522 aaPredicted RBP11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 DCAF12L1Q5VU92 463 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 IL31RAQ8NI17 732 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 SLC35G2Q8TBE7 412 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 RNPC3Q96LT9 517 aaKnown RBP11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 PCIF1Q9H4Z3 704 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 TAF1DQ9H5J8 278 aaPredicted RBP11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 COL20A1Q9P218 1284 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 TMEM150BA6NC51 233 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 PGRMC1O00264 195 aaKnown RBP11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 PPIP5K2O43314 1243 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 VIL1P09327 827 aaKnown RBP11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 ITGB5P18084 799 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 SWT1Q5T5J6 900 aaKnown RBP11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 ADAT2Q7Z6V5 191 aaKnown RBP11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 MREGQ8N565 214 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 TMEM39BQ9GZU3 492 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 RANBP17Q9H2T7 1088 aaKnown RBP11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 CHORDC1Q9UHD1 332 aaPredicted RBP11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 SPDYE2BA6NHP3 402 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 IPO5O00410 1097 aaKnown RBP11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 KRIT1O00522 736 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 C21orf2O43822 256 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 HIP1RO75146 1068 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 SPDYE6P0CI01 402 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 FERP16591 822 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 GUCY1A3Q02108 690 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 GRIPAP1Q4V328 841 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 B3GNT9Q6UX72 402 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 PBKQ96KB5 322 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 AGBL1Q96MI9 1066 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 INTS2Q9H0H0 1204 aaKnown RBP11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 ISCUQ9H1K1 167 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 VEZTQ9HBM0 779 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 ARHGEF10LQ9HCE6 1279 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 LRRC4CQ9HCJ2 640 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 PLAAQ9Y263 795 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 SAMM50Q9Y512 469 aa11.3□□□□□ -0.6
CLSTN1-203ENST00000435891 CES2O00748 559 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 TTI1O43156 1089 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 DGKZQ13574 1117 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 LDHDQ86WU2 507 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 HES6Q96HZ4 224 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 STK33Q9BYT3 514 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 COG5Q9UP83 839 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 STK24Q9Y6E0 443 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 CNTNAP1P78357 1384 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 FOXN3O00409 490 aaPredicted RBP11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 DAPK3O43293 454 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 RNF187Q5TA31 235 aaPredicted RBP11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 HS2ST1Q7LGA3 356 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 VPS36Q86VN1 386 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 LMO3Q8TAP4 145 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 SLC20A1Q8WUM9 679 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 THAP2Q9H0W7 228 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 HERC5Q9UII4 1024 aaKnown RBP11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 MYH11P35749 1972 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 PPP1R12AO14974 1030 aaPredicted RBP11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 EXOC3O60645 756 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 PPP1R37O75864 691 aa11.29□□□□□ -0.6
CLSTN1-203ENST00000435891 HSD17B3P37058 310 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms