RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 CHMP2AO43633 222 aa13.09□□□□□ -0.31
CHRNA1-207ENST00000435083 ZC3H11AO75152 810 aaKnown RBP eCLIP13.09□□□□□ -0.31
CHRNA1-207ENST00000435083 EPCAMP16422 314 aa13.09□□□□□ -0.31
CHRNA1-207ENST00000435083 FGD1P98174 961 aa13.09□□□□□ -0.31
CHRNA1-207ENST00000435083 PRKCEQ02156 737 aa13.09□□□□□ -0.31
CHRNA1-207ENST00000435083 TBC1D8BQ0IIM8 1120 aa13.09□□□□□ -0.31
CHRNA1-207ENST00000435083 ADCK5Q3MIX3 580 aa13.09□□□□□ -0.31
CHRNA1-207ENST00000435083 LONRF3Q496Y0 759 aa13.09□□□□□ -0.31
CHRNA1-207ENST00000435083 ASTLQ6HA08 431 aaPredicted RBP13.09□□□□□ -0.31
CHRNA1-207ENST00000435083 KIAA1841Q6NSI8 718 aa13.09□□□□□ -0.31
CHRNA1-207ENST00000435083 ZDHHC14Q8IZN3 488 aa13.09□□□□□ -0.31
CHRNA1-207ENST00000435083 DZANK1Q9NVP4 752 aa13.09□□□□□ -0.31
CHRNA1-207ENST00000435083 CCDC196A0A1B0GTZ2 297 aa13.08□□□□□ -0.32
CHRNA1-207ENST00000435083 GNA11P29992 359 aa13.08□□□□□ -0.32
CHRNA1-207ENST00000435083 CIITAP33076 1130 aa13.08□□□□□ -0.32
CHRNA1-207ENST00000435083 UGCGQ16739 394 aa13.08□□□□□ -0.32
CHRNA1-207ENST00000435083 RASEFQ8IZ41 740 aa13.08□□□□□ -0.32
CHRNA1-207ENST00000435083 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
CHRNA1-207ENST00000435083 LPPQ93052 612 aa13.08□□□□□ -0.32
CHRNA1-207ENST00000435083 GCOM2Q9BZD3 368 aaPredicted RBP13.08□□□□□ -0.32
CHRNA1-207ENST00000435083 ZBP1Q9H171 429 aa13.08□□□□□ -0.32
CHRNA1-207ENST00000435083 PRR23AA6NEV1 266 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 SPDYE4A6NLX3 237 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 GAS7O60861 476 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 NBL1P41271 181 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 RCAN1P53805 252 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 DRP2Q13474 957 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 TWF2Q6IBS0 349 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 TMC5Q6UXY8 1006 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 DDX53Q86TM3 631 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 TMEM173Q86WV6 379 aaPredicted RBP13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 FLCNQ8NFG4 579 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 SLC22A17Q8WUG5 538 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 LENG9Q96B70 501 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 GBP3Q9H0R5 595 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 CYP26B1Q9NR63 512 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 CHST12Q9NRB3 414 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 INPP5FQ9Y2H2 1132 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 A0A087WZ62 844 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 MSH4O15457 936 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 CTSAP10619 480 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 SFNP31947 248 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 PHKA2P46019 1235 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 POLGP54098 1239 aaPredicted RBP13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 AKAP17AQ02040 695 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 RNASELQ05823 741 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 GIT2Q14161 759 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 KRT32Q14532 448 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 MTERF2Q49AM1 385 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 GLB1LQ6UWU2 654 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 FRMD5Q7Z6J6 570 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 CABP7Q86V35 215 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 BICD2Q8TD16 824 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 ACSF2Q96CM8 615 aaPredicted RBP13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 IGSF21Q96ID5 467 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 CCDC136Q96JN2 1154 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 RIT2Q99578 217 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 FDXACB1Q9BRP7 624 aaPredicted RBP13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 TEKT3Q9BXF9 490 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 UNC45AQ9H3U1 944 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 NRDE2Q9H7Z3 1164 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 SEPT9Q9UHD8 586 aaPredicted RBP13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 USTQ9Y2C2 406 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 IRAK3Q9Y616 596 aa13.07□□□□□ -0.32
CHRNA1-207ENST00000435083 PRPF3O43395 683 aaKnown RBP13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 GALTP07902 379 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 CPA1P15085 419 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 SFPQP23246 707 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 DNM2P50570 870 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 CLCN5P51795 746 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 JAK3P52333 1124 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 CDC42EP1Q00587 391 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 TARBP2Q15633 366 aaKnown RBP13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 TSGA10IPQ3SY00 556 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 NOMO2Q5JPE7 1267 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 LRCH2Q5VUJ6 765 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 MIER3Q7Z3K6 550 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 POTEDQ86YR6 584 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 FEZF2Q8TBJ5 459 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 BCL7CQ8WUZ0 217 aaPredicted RBP13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 PHKBQ93100 1093 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 NKD2Q969F2 451 aaPredicted RBP13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 GJA10Q969M2 543 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 SH2D3AQ9BRG2 576 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 TBC1D13Q9NVG8 400 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 PIN4Q9Y237 131 aaKnown RBP13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 ZFHX2Q9C0A1 2572 aaPredicted RBP13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 CACNA1HO95180 2353 aa13.06□□□□□ -0.32
CHRNA1-207ENST00000435083 CARNS1A5YM72 827 aa13.05□□□□□ -0.32
CHRNA1-207ENST00000435083 TMEM150BA6NC51 233 aa13.05□□□□□ -0.32
CHRNA1-207ENST00000435083 HMGB1P09429 215 aaKnown RBP13.05□□□□□ -0.32
CHRNA1-207ENST00000435083 SKIP12755 728 aa13.05□□□□□ -0.32
CHRNA1-207ENST00000435083 XKR3Q5GH77 459 aa13.05□□□□□ -0.32
CHRNA1-207ENST00000435083 Q6ZUG5 572 aa13.05□□□□□ -0.32
CHRNA1-207ENST00000435083 PPFIBP1Q86W92 1011 aa13.05□□□□□ -0.32
CHRNA1-207ENST00000435083 RSPH1Q8WYR4 309 aa13.05□□□□□ -0.32
CHRNA1-207ENST00000435083 SLC5A5Q92911 643 aa13.05□□□□□ -0.32
CHRNA1-207ENST00000435083 BRF1Q92994 677 aa13.05□□□□□ -0.32
CHRNA1-207ENST00000435083 INO80BQ9C086 356 aaPredicted RBP13.05□□□□□ -0.32
CHRNA1-207ENST00000435083 FAM105AQ9NUU6 356 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms