RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 MIS18BP1Q6P0N0 1132 aa13.26□□□□□ -0.29
SEMA3F-206ENST00000434342 PPP4R3CPQ6ZMV5 832 aa13.26□□□□□ -0.29
SEMA3F-206ENST00000434342 KRT27Q7Z3Y8 459 aa13.26□□□□□ -0.29
SEMA3F-206ENST00000434342 IFT20Q8IY31 132 aa13.26□□□□□ -0.29
SEMA3F-206ENST00000434342 GCNT4Q9P109 453 aa13.26□□□□□ -0.29
SEMA3F-206ENST00000434342 FAM153AQ9UHL3 310 aa13.26□□□□□ -0.29
SEMA3F-206ENST00000434342 CLRN2A0PK11 232 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 RBAK-RBAKDNI3L0D1 243 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 RTN3O95197 1032 aaPredicted RBP13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 KRT14P02533 472 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 HPDP32754 393 aaPredicted RBP13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 PPP1R7Q15435 360 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 AOC3Q16853 763 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 AP1M1Q9BXS5 423 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 SEPT11Q9NVA2 429 aaKnown RBP13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 PRR12Q9ULL5 1215 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 BCS1LQ9Y276 419 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 GFPT2O94808 682 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 FOSP01100 380 aaPredicted RBP13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 SREBF1P36956 1147 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 SPATA21Q7Z572 469 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 PRMT6Q96LA8 375 aaPredicted RBP13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 FAM20AQ96MK3 541 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 CCDC43Q96MW1 224 aaKnown RBP13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 PAPOLBQ9NRJ5 636 aaKnown RBP13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 ZNF831Q5JPB2 1677 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 DDX39AO00148 427 aaKnown RBP13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 LSP1P33241 339 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 MAGEA10P43363 369 aaPredicted RBP13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 CYP2J2P51589 502 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 MARSP56192 900 aaKnown RBP13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 SLC8A3P57103 927 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 ITIH3Q06033 890 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 RRP1BQ14684 758 aaKnown RBP13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 DACT2Q5SW24 774 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 STRIP1Q5VSL9 837 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 IRF2BP2Q7Z5L9 587 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 FRMD5Q7Z6J6 570 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 RBM46Q8TBY0 533 aaKnown RBP13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 ACER1Q8TDN7 264 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 U2AF1L4Q8WU68 220 aaKnown RBP13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 DYDC2Q96IM9 177 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 RNPC3Q96LT9 517 aaKnown RBP13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 PIDD1Q9HB75 910 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 NOD2Q9HC29 1040 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 TRAF3IP3Q9Y228 551 aa13.25□□□□□ -0.29
SEMA3F-206ENST00000434342 SPATA31A6Q5VVP1 1343 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 PDXKO00764 312 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 DIAPH2O60879 1101 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 OATP04181 439 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 CHRNA5P30532 468 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 HOXA7P31268 230 aaPredicted RBP13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 SLC8A1P32418 973 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 PAPOLAP51003 745 aaKnown RBP13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 TMEM62Q0P6H9 643 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 MEI1Q5TIA1 1274 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 TRIM68Q6AZZ1 485 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 EMBQ6PCB8 327 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 FOXR2Q6PJQ5 311 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 CCT8L2Q96SF2 557 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 YIPF2Q9BWQ6 316 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 NAGPAQ9UK23 515 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 ANP32DO95626 131 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 NEFHP12036 1026 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 COG2Q14746 738 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 Q4G0T1 1027 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 CFAP58Q5T655 872 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 RINT1Q6NUQ1 792 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 TSC22D3Q99576 134 aa13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 TYW1Q9NV66 732 aaKnown RBP13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 AJAP1Q9UKB5 411 aaPredicted RBP13.24□□□□□ -0.29
SEMA3F-206ENST00000434342 OPA1O60313 960 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 ABCB4P21439 1286 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 TTMPQ5BVD1 217 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 SYCP3Q8IZU3 236 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 MBOAT7Q96N66 472 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 TRIM4Q9C037 500 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 TBX3O15119 743 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 FLOT1O75955 427 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 TATDN1Q6P1N9 297 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 VPS36Q86VN1 386 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 CRYGNQ8WXF5 182 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 SLC35C1Q96A29 364 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 ZIM3Q96PE6 472 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 IDI2Q9BXS1 227 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.23□□□□□ -0.297e-6■■■■■ 74.5
SEMA3F-206ENST00000434342 PCDHGC5Q9Y5F6 944 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 RAD51CO43502 376 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 STAT2P52630 851 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 MOXD1Q6UVY6 613 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 ARHGAP27Q6ZUM4 889 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 ZNF572Q7Z3I7 529 aaPredicted RBP13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 FAM186BQ8IYM0 893 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 RNF14Q9UBS8 474 aa13.23□□□□□ -0.29
SEMA3F-206ENST00000434342 ONECUT3O60422 494 aaPredicted RBP13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 GAS7O60861 476 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 EYA4O95677 639 aa13.22□□□□□ -0.29
SEMA3F-206ENST00000434342 TRIM49P0CI25 452 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms