RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 USP15Q9Y4E8 981 aaPredicted RBP16.7■□□□□ 0.26
RPUSD3-208ENST00000433972 IGKV6-21A0A0C4DH24 114 aa16.69■□□□□ 0.26
RPUSD3-208ENST00000433972 LOC730098B7Z3J9 87 aa16.69■□□□□ 0.26
RPUSD3-208ENST00000433972 M0R2N6 131 aa16.69■□□□□ 0.26
RPUSD3-208ENST00000433972 PER2O15055 1255 aa16.69■□□□□ 0.26
RPUSD3-208ENST00000433972 EDIL3O43854 480 aa16.69■□□□□ 0.26
RPUSD3-208ENST00000433972 RAB27AP51159 221 aa16.69■□□□□ 0.26
RPUSD3-208ENST00000433972 AK2P54819 239 aa16.69■□□□□ 0.26
RPUSD3-208ENST00000433972 ERVFC1P60507 584 aa16.69■□□□□ 0.26
RPUSD3-208ENST00000433972 STK3Q13188 491 aa16.69■□□□□ 0.26
RPUSD3-208ENST00000433972 SMC1AQ14683 1233 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-208ENST00000433972 B3GNT9Q6UX72 402 aa16.69■□□□□ 0.26
RPUSD3-208ENST00000433972 SLC7A3Q8WY07 619 aa16.69■□□□□ 0.26
RPUSD3-208ENST00000433972 EDAQ92838 391 aa16.69■□□□□ 0.26
RPUSD3-208ENST00000433972 LARP6Q9BRS8 491 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-208ENST00000433972 STK39Q9UEW8 545 aa16.69■□□□□ 0.26
RPUSD3-208ENST00000433972 STK36Q9NRP7 1315 aa16.69■□□□□ 0.26
RPUSD3-208ENST00000433972 DDX11L8A8MPP1 907 aa16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 MARCH6O60337 910 aa16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 MAFO75444 373 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 QARSP47897 775 aaKnown RBP16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 RBM25P49756 843 aaKnown RBP16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 CBX2Q14781 532 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 LETM2Q2VYF4 491 aa16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 TPRNQ4KMQ1 711 aa16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 TWF2Q6IBS0 349 aaKnown RBP16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 PPP4R3AQ6IN85 833 aa16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 GLB1LQ6UWU2 654 aa16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 NEK8Q86SG6 692 aa16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 RHPN2Q8IUC4 686 aa16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 TMEM87AQ8NBN3 555 aa16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 WASF1Q92558 559 aa16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 CASP10Q92851 521 aa16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 TMEM169Q96HH4 297 aa16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 SUCLA2Q9P2R7 463 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 PCDHGC5Q9Y5F6 944 aa16.68■□□□□ 0.26
RPUSD3-208ENST00000433972 TBX3O15119 743 aa16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 GAS2O43903 313 aaKnown RBP16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 PFKFB2O60825 505 aa16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 P4HBP07237 508 aaKnown RBP16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 TECP42680 631 aa16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 PPP2R5CQ13362 524 aa16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 GIT2Q14161 759 aa16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 INF2Q27J81 1249 aa16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 LRRC55Q6ZSA7 311 aa16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 ZNF598Q86UK7 904 aaKnown RBP16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 HELQQ8TDG4 1101 aa16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 SUSD6Q92537 303 aa16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 PGBD4Q96DM1 585 aa16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 ZNF668Q96K58 619 aaPredicted RBP16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 PHF20Q9BVI0 1012 aa16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 BRMS1Q9HCU9 246 aa16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 RNF19AQ9NV58 838 aa16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 HCSTQ9UBK5 93 aa16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 PIN4Q9Y237 131 aaKnown RBP16.67■□□□□ 0.26
RPUSD3-208ENST00000433972 KIAA1671Q9BY89 1806 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 A0A087WZ62 844 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 BAG4O95429 457 aaKnown RBP16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 RFC5P40937 340 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 PHKA2P46019 1235 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 POLGP54098 1239 aaPredicted RBP16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 RABEP1Q15276 862 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 CLLU1OSQ5K130 101 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 CES5AQ6NT32 575 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 ANKRD54Q6NXT1 300 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 OTUD6AQ7L8S5 288 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 CATSPER4Q7RTX7 472 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 BMP8AQ7Z5Y6 402 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 SLC39A11Q8N1S5 342 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 GJA10Q969M2 543 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 RPGRIP1Q96KN7 1286 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 NLRP4Q96MN2 994 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 NECTIN4Q96NY8 510 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 PRRX2Q99811 253 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 FDXACB1Q9BRP7 624 aaPredicted RBP16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 CYP26B1Q9NR63 512 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 TPCN1Q9ULQ1 816 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 NR2E1Q9Y466 385 aa16.66■□□□□ 0.26
RPUSD3-208ENST00000433972 FGFR4P22455 802 aa16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 BCAR1P56945 870 aa16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 ITIH3Q06033 890 aa16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 DRP2Q13474 957 aa16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 KCNC3Q14003 757 aa16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 NPY5RQ15761 445 aa16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 HFE2Q6ZVN8 426 aa16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 ANO5Q75V66 913 aa16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 SLFN12Q8IYM2 578 aa16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 MRPL43Q8N983 215 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 TCP11Q8WWU5 503 aa16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 PSPC1Q8WXF1 523 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 CEP170P1Q96L14 293 aa16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 ZSCAN31Q96LW9 406 aaPredicted RBP16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 CEP89Q96ST8 783 aa16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 KCNMB3Q9NPA1 279 aa16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 FAM105AQ9NUU6 356 aa16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 LIMCH1Q9UPQ0 1083 aa16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 MYH9P35579 1960 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 FNDC1Q4ZHG4 1894 aaPredicted RBP16.65■□□□□ 0.26
RPUSD3-208ENST00000433972 ATG2AQ2TAZ0 1938 aa16.64■□□□□ 0.26
RPUSD3-208ENST00000433972 HIDE1A8MVS5 230 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms