RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 COL23A1Q86Y22 540 aaPredicted RBP14.83□□□□□ -0.03
COL6A3-207ENST00000433762 HINFPQ9BQA5 517 aa14.83□□□□□ -0.03
COL6A3-207ENST00000433762 TIPINQ9BVW5 301 aa14.83□□□□□ -0.03
COL6A3-207ENST00000433762 INTS2Q9H0H0 1204 aaKnown RBP14.83□□□□□ -0.03
COL6A3-207ENST00000433762 UTP11Q9Y3A2 253 aaKnown RBP14.83□□□□□ -0.03
COL6A3-207ENST00000433762 GOLGA6L10A0A0M3HER8 536 aa14.83□□□□□ -0.04
COL6A3-207ENST00000433762 NDUFAB1O14561 156 aa14.83□□□□□ -0.04
COL6A3-207ENST00000433762 GDF11O95390 407 aa14.83□□□□□ -0.04
COL6A3-207ENST00000433762 RBM5P52756 815 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL6A3-207ENST00000433762 MYL7Q01449 175 aa14.83□□□□□ -0.04
COL6A3-207ENST00000433762 BFSP1Q12934 665 aa14.83□□□□□ -0.04
COL6A3-207ENST00000433762 DHX34Q14147 1143 aaKnown RBP14.83□□□□□ -0.04
COL6A3-207ENST00000433762 PTGISQ16647 500 aa14.83□□□□□ -0.04
COL6A3-207ENST00000433762 SHROOM1Q2M3G4 852 aaPredicted RBP14.83□□□□□ -0.04
COL6A3-207ENST00000433762 TPH2Q8IWU9 490 aa14.83□□□□□ -0.04
COL6A3-207ENST00000433762 RNPC3Q96LT9 517 aaKnown RBP14.83□□□□□ -0.04
COL6A3-207ENST00000433762 TEKT3Q9BXF9 490 aa14.83□□□□□ -0.04
COL6A3-207ENST00000433762 FAM129AQ9BZQ8 928 aa14.83□□□□□ -0.04
COL6A3-207ENST00000433762 GPR88Q9GZN0 384 aa14.83□□□□□ -0.04
COL6A3-207ENST00000433762 TMEM206Q9H813 350 aa14.83□□□□□ -0.04
COL6A3-207ENST00000433762 DDX3YO15523 660 aaKnown RBP14.82□□□□□ -0.04
COL6A3-207ENST00000433762 PAEPP09466 180 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 NMT1P30419 496 aaKnown RBP14.82□□□□□ -0.04
COL6A3-207ENST00000433762 HOXA13P31271 388 aaPredicted RBP14.82□□□□□ -0.04
COL6A3-207ENST00000433762 CACNB3P54284 484 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 GHRHRQ02643 423 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 CETN1Q12798 172 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 CTTNQ14247 550 aaKnown RBP14.82□□□□□ -0.04
COL6A3-207ENST00000433762 PLS1Q14651 629 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 CEP85LQ5SZL2 805 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 INTS8Q75QN2 995 aaKnown RBP14.82□□□□□ -0.04
COL6A3-207ENST00000433762 ARMC9Q7Z3E5 817 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 SLC17A8Q8NDX2 589 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 SUPT20HQ8NEM7 779 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 CYP2W1Q8TAV3 490 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 ST6GALNAC4Q9H4F1 302 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 SMCHD1A6NHR9 2005 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 A0A1W2PRG0 241 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 MTA2O94776 668 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 GGPS1O95749 300 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 DNA2P51530 1060 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 KCNA1Q09470 495 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 PDCLQ13371 301 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 CROCCP2Q86T23 111 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 SAMD3Q8N6K7 520 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 SLC35G2Q8TBE7 412 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 ZBTB9Q96C00 473 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 DBR1Q9UK59 544 aaKnown RBP14.82□□□□□ -0.04
COL6A3-207ENST00000433762 SYNGAP1Q96PV0 1343 aa14.82□□□□□ -0.04
COL6A3-207ENST00000433762 BUB1BO60566 1050 aaPredicted RBP14.81□□□□□ -0.04
COL6A3-207ENST00000433762 PPFIA2O75334 1257 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 FAM107AO95990 144 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 TNFAIP3P21580 790 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 DRP2Q13474 957 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 UAP1Q16222 522 aaPredicted RBP14.81□□□□□ -0.04
COL6A3-207ENST00000433762 TMC3Q7Z5M5 1100 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 LMO3Q8TAP4 145 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 PIGOQ8TEQ8 1089 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 RUNDC3BQ96NL0 473 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 TXLNGYQ9BZA5 131 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 STK32BQ9NY57 414 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 ERLIN2O94905 339 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 LYPLA2O95372 231 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 SLURP2P0DP57 97 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 KRT13P13646 458 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 GRIPAP1Q4V328 841 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 ODR4Q5SWX8 454 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 SH2D3CQ8N5H7 860 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 UIMC1Q96RL1 719 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 RPS6KC1Q96S38 1066 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 CSRNP1Q96S65 589 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 DDX47Q9H0S4 455 aaKnown RBP14.81□□□□□ -0.04
COL6A3-207ENST00000433762 TMOD2Q9NZR1 351 aa14.81□□□□□ -0.04
COL6A3-207ENST00000433762 TBC1D12O60347 775 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 CTNNA1P35221 906 aaKnown RBP14.8□□□□□ -0.04
COL6A3-207ENST00000433762 SNAP25P60880 206 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 ZNF844Q08AG5 666 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 MAPK7Q13164 816 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 FKBP1CQ5VVH2 108 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 GLYCTKQ8IVS8 523 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 IWS1Q96ST2 819 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 ZNF577Q9BSK1 485 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 LARSQ9P2J5 1176 aaKnown RBP14.8□□□□□ -0.04
COL6A3-207ENST00000433762 SLC12A6Q9UHW9 1150 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 FEM1BQ9UK73 627 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 ARHGEF35A5YM69 484 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 CFBP00751 764 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 KCNA4P22459 653 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 CDR1P51861 262 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 RNASE9P60153 205 aaKnown RBP14.8□□□□□ -0.04
COL6A3-207ENST00000433762 ENPEPQ07075 957 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 CBWD6Q4V339 395 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 CBWD3Q5JTY5 395 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 CBWD5Q5RIA9 395 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 NAA35Q5VZE5 725 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 KCTD16Q68DU8 428 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 GJB7Q6PEY0 223 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 CCDC125Q86Z20 511 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 AGPAT1Q99943 283 aa14.8□□□□□ -0.04
COL6A3-207ENST00000433762 AP1M1Q9BXS5 423 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms