RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 SLC9A7Q96T83 725 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 FTHL17Q9BXU8 183 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 PANK2Q9BZ23 570 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 CCSER1Q9C0I3 900 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 ST3GAL5Q9UNP4 418 aa17.21■□□□□ 0.35
TREX1-201ENST00000433541 INO80B-WBP1J3KQ70 363 aa17.2■□□□□ 0.34
TREX1-201ENST00000433541 ERLIN2O94905 339 aa17.2■□□□□ 0.34
TREX1-201ENST00000433541 ZSCAN20P17040 1043 aaPredicted RBP17.2■□□□□ 0.34
TREX1-201ENST00000433541 DEFB103AP81534 67 aa17.2■□□□□ 0.34
TREX1-201ENST00000433541 MCM6Q14566 821 aa17.2■□□□□ 0.34
TREX1-201ENST00000433541 TMEM132AQ24JP5 1023 aa17.2■□□□□ 0.34
TREX1-201ENST00000433541 CCDC73Q6ZRK6 1079 aa17.2■□□□□ 0.34
TREX1-201ENST00000433541 FAM228AQ86W67 206 aa17.2■□□□□ 0.34
TREX1-201ENST00000433541 GPBP1Q86WP2 473 aa17.2■□□□□ 0.34
TREX1-201ENST00000433541 ASAP3Q8TDY4 903 aa17.2■□□□□ 0.34
TREX1-201ENST00000433541 KIFAP3Q92845 792 aa17.2■□□□□ 0.34
TREX1-201ENST00000433541 CHAMP1Q96JM3 812 aa17.2■□□□□ 0.34
TREX1-201ENST00000433541 SCAND2PQ9GZW5 306 aaPredicted RBP17.2■□□□□ 0.34
TREX1-201ENST00000433541 POLD4Q9HCU8 107 aa17.2■□□□□ 0.34
TREX1-201ENST00000433541 FAM13BQ9NYF5 915 aa17.2■□□□□ 0.34
TREX1-201ENST00000433541 MORC2Q9Y6X9 1032 aaPredicted RBP17.2■□□□□ 0.34
TREX1-201ENST00000433541 GRXCR1A8MXD5 290 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 LIG1P18858 919 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 CAPSQ13938 189 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 PPP2R5AQ15172 486 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 LRIT3Q3SXY7 679 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 RINT1Q6NUQ1 792 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.19■□□□□ 0.34
TREX1-201ENST00000433541 ZBTB8OSQ8IWT0 167 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 SYT2Q8N9I0 419 aaPredicted RBP17.19■□□□□ 0.34
TREX1-201ENST00000433541 DEPTORQ8TB45 409 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 LARP4BQ92615 738 aaKnown RBP17.19■□□□□ 0.34
TREX1-201ENST00000433541 RAD54LQ92698 747 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 DRC1Q96MC2 740 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 RUSC1Q9BVN2 902 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 ZHX3Q9H4I2 956 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 ERVK-5Q9HDB9 667 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 STK17AQ9UEE5 414 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 MSRAQ9UJ68 235 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 LRFN2Q9ULH4 789 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 PCDHA7Q9UN72 937 aa17.19■□□□□ 0.34
TREX1-201ENST00000433541 CCDC169A6NNP5 214 aa17.18■□□□□ 0.34
TREX1-201ENST00000433541 HIP1RO75146 1068 aa17.18■□□□□ 0.34
TREX1-201ENST00000433541 GLRA2P23416 452 aa17.18■□□□□ 0.34
TREX1-201ENST00000433541 ARL2P36404 184 aa17.18■□□□□ 0.34
TREX1-201ENST00000433541 RABGGTBP53611 331 aa17.18■□□□□ 0.34
TREX1-201ENST00000433541 NCBP1Q09161 790 aaKnown RBP17.18■□□□□ 0.34
TREX1-201ENST00000433541 RASIP1Q5U651 963 aa17.18■□□□□ 0.34
TREX1-201ENST00000433541 FAM109BQ6ICB4 259 aaPredicted RBP17.18■□□□□ 0.34
TREX1-201ENST00000433541 SRGAP1Q7Z6B7 1085 aa17.18■□□□□ 0.34
TREX1-201ENST00000433541 TMCO2Q7Z6W1 182 aaPredicted RBP17.18■□□□□ 0.34
TREX1-201ENST00000433541 LEO1Q8WVC0 666 aaPredicted RBP17.18■□□□□ 0.34
TREX1-201ENST00000433541 ADAM2Q99965 735 aa17.18■□□□□ 0.34
TREX1-201ENST00000433541 RCOR1Q9UKL0 485 aa17.18■□□□□ 0.34
TREX1-201ENST00000433541 CIZ1Q9ULV3 898 aaPredicted RBP17.18■□□□□ 0.34
TREX1-201ENST00000433541 PIN4Q9Y237 131 aaKnown RBP17.18■□□□□ 0.34
TREX1-201ENST00000433541 RBM19Q9Y4C8 960 aaKnown RBP17.18■□□□□ 0.34
TREX1-201ENST00000433541 GOLGA6L4A6NEF3 574 aa17.17■□□□□ 0.34
TREX1-201ENST00000433541 TLL1O43897 1013 aa17.17■□□□□ 0.34
TREX1-201ENST00000433541 TBCAO75347 108 aaKnown RBP17.17■□□□□ 0.34
TREX1-201ENST00000433541 SLC12A3P55017 1021 aa17.17■□□□□ 0.34
TREX1-201ENST00000433541 SMAD3P84022 425 aaKnown RBP17.17■□□□□ 0.34
TREX1-201ENST00000433541 CACNB1Q02641 598 aaPredicted RBP17.17■□□□□ 0.34
TREX1-201ENST00000433541 DMP1Q13316 513 aaPredicted RBP17.17■□□□□ 0.34
TREX1-201ENST00000433541 RAB30Q15771 203 aa17.17■□□□□ 0.34
TREX1-201ENST00000433541 HERC6Q8IVU3 1022 aa17.17■□□□□ 0.34
TREX1-201ENST00000433541 PHOSPHO2Q8TCD6 241 aa17.17■□□□□ 0.34
TREX1-201ENST00000433541 DHX58Q96C10 678 aa17.17■□□□□ 0.34
TREX1-201ENST00000433541 LRCH3Q96II8 777 aa17.17■□□□□ 0.34
TREX1-201ENST00000433541 TIPINQ9BVW5 301 aa17.17■□□□□ 0.34
TREX1-201ENST00000433541 GDPD2Q9HCC8 539 aa17.17■□□□□ 0.34
TREX1-201ENST00000433541 KCND2Q9NZV8 630 aa17.17■□□□□ 0.34
TREX1-201ENST00000433541 CHMP5Q9NZZ3 219 aa17.17■□□□□ 0.34
TREX1-201ENST00000433541 LAMA2P24043 3122 aaKnown RBP17.17■□□□□ 0.34
TREX1-201ENST00000433541 NPHP3-ACAD11A0A0J9YXS1 232 aa17.16■□□□□ 0.34
TREX1-201ENST00000433541 DDIT3P35638 169 aa17.16■□□□□ 0.34
TREX1-201ENST00000433541 NAMPTP43490 491 aa17.16■□□□□ 0.34
TREX1-201ENST00000433541 PEX3P56589 373 aa17.16■□□□□ 0.34
TREX1-201ENST00000433541 TWF2Q6IBS0 349 aaKnown RBP17.16■□□□□ 0.34
TREX1-201ENST00000433541 SHC4Q6S5L8 630 aa17.16■□□□□ 0.34
TREX1-201ENST00000433541 C1orf186Q6ZWK4 172 aa17.16■□□□□ 0.34
TREX1-201ENST00000433541 SV2BQ7L1I2 683 aa17.16■□□□□ 0.34
TREX1-201ENST00000433541 RNF169Q8NCN4 708 aa17.16■□□□□ 0.34
TREX1-201ENST00000433541 C2orf40Q9H1Z8 148 aa17.16■□□□□ 0.34
TREX1-201ENST00000433541 IFT122Q9HBG6 1241 aa17.16■□□□□ 0.34
TREX1-201ENST00000433541 TSHZ2Q9NRE2 1034 aa17.16■□□□□ 0.34
TREX1-201ENST00000433541 BLOC1S4Q9NUP1 217 aa17.16■□□□□ 0.34
TREX1-201ENST00000433541 TTC3P53804 2025 aa17.16■□□□□ 0.34
TREX1-201ENST00000433541 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.15■□□□□ 0.34
TREX1-201ENST00000433541 SFI1A8K8P3 1242 aa17.15■□□□□ 0.34
TREX1-201ENST00000433541 SOX1O00570 391 aaPredicted RBP17.15■□□□□ 0.34
TREX1-201ENST00000433541 ENPP3O14638 875 aa17.15■□□□□ 0.34
TREX1-201ENST00000433541 MGEA5O60502 916 aa17.15■□□□□ 0.34
TREX1-201ENST00000433541 FAM13AO94988 1023 aa17.15■□□□□ 0.34
TREX1-201ENST00000433541 STAG3L1P0CL83 205 aa17.15■□□□□ 0.34
TREX1-201ENST00000433541 GUCY2CP25092 1073 aa17.15■□□□□ 0.34
TREX1-201ENST00000433541 DNAJB2P25686 324 aa17.15■□□□□ 0.34
TREX1-201ENST00000433541 PTENP60484 403 aa17.15■□□□□ 0.34
TREX1-201ENST00000433541 BSNDQ8WZ55 320 aa17.15■□□□□ 0.34
TREX1-201ENST00000433541 YME1L1Q96TA2 773 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms