RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 NOC2LQ9Y3T9 749 aaKnown RBP20.42■□□□□ 0.86
RFTN1-202ENST00000431547 A0A1B0GVL5 298 aa20.41■□□□□ 0.86
RFTN1-202ENST00000431547 GOLGA6L4A6NEF3 574 aa20.41■□□□□ 0.86
RFTN1-202ENST00000431547 GPR182O15218 404 aa20.41■□□□□ 0.86
RFTN1-202ENST00000431547 HIP1RO75146 1068 aa20.41■□□□□ 0.86
RFTN1-202ENST00000431547 PFKFB1P16118 471 aa20.41■□□□□ 0.86
RFTN1-202ENST00000431547 CD52P31358 61 aa20.41■□□□□ 0.86
RFTN1-202ENST00000431547 MAPK7Q13164 816 aa20.41■□□□□ 0.86
RFTN1-202ENST00000431547 CAPSQ13938 189 aa20.41■□□□□ 0.86
RFTN1-202ENST00000431547 CLEC17AQ6ZS10 378 aa20.41■□□□□ 0.86
RFTN1-202ENST00000431547 IFNLR1Q8IU57 520 aaPredicted RBP20.41■□□□□ 0.86
RFTN1-202ENST00000431547 HERVK_113Q902F9 699 aa20.41■□□□□ 0.86
RFTN1-202ENST00000431547 MRPS27Q92552 414 aaKnown RBP20.41■□□□□ 0.86
RFTN1-202ENST00000431547 DHX58Q96C10 678 aa20.41■□□□□ 0.86
RFTN1-202ENST00000431547 NFKBIZQ9BYH8 718 aa20.41■□□□□ 0.86
RFTN1-202ENST00000431547 C17orf75Q9HAS0 396 aa20.41■□□□□ 0.86
RFTN1-202ENST00000431547 POLD4Q9HCU8 107 aa20.41■□□□□ 0.86
RFTN1-202ENST00000431547 ODF2LQ9ULJ1 636 aa20.41■□□□□ 0.86
RFTN1-202ENST00000431547 BAIAP3O94812 1187 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 PHKA2P46019 1235 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 PTENP60484 403 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 PAK2Q13177 524 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 GIT2Q14161 759 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 IKBKEQ14164 716 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 PPP2R5AQ15172 486 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 SHHQ15465 462 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 TCTN1Q2MV58 587 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 C9orf50Q5SZB4 431 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 SRGAP1Q7Z6B7 1085 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 FAM228AQ86W67 206 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 FSIP1Q8NA03 581 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 TMEM87AQ8NBN3 555 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 BSNDQ8WZ55 320 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 IFT74Q96LB3 600 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 MAGEF1Q9HAY2 307 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 ERVK-5Q9HDB9 667 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 KBTBD4Q9NVX7 518 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 ST3GAL5Q9UNP4 418 aa20.4■□□□□ 0.86
RFTN1-202ENST00000431547 NPHP3-ACAD11A0A0J9YXS1 232 aa20.39■□□□□ 0.85
RFTN1-202ENST00000431547 ABHD14A-ACY1A0A1B0GW23 586 aa20.39■□□□□ 0.85
RFTN1-202ENST00000431547 EFCAB14O75071 495 aa20.39■□□□□ 0.85
RFTN1-202ENST00000431547 KRT18P05783 430 aaKnown RBP20.39■□□□□ 0.85
RFTN1-202ENST00000431547 NAMPTP43490 491 aa20.39■□□□□ 0.85
RFTN1-202ENST00000431547 NDUFA8P51970 172 aa20.39■□□□□ 0.85
RFTN1-202ENST00000431547 RAD51AP2Q09MP3 1159 aa20.39■□□□□ 0.85
RFTN1-202ENST00000431547 RASIP1Q5U651 963 aa20.39■□□□□ 0.85
RFTN1-202ENST00000431547 OTOP2Q7RTS6 562 aa20.39■□□□□ 0.85
RFTN1-202ENST00000431547 REEP2Q9BRK0 252 aa20.39■□□□□ 0.85
RFTN1-202ENST00000431547 LRRC27Q9C0I9 530 aa20.39■□□□□ 0.85
RFTN1-202ENST00000431547 TNMDQ9H2S6 317 aa20.39■□□□□ 0.85
RFTN1-202ENST00000431547 USP25Q9UHP3 1055 aa20.39■□□□□ 0.85
RFTN1-202ENST00000431547 KCNG1Q9UIX4 513 aa20.39■□□□□ 0.85
RFTN1-202ENST00000431547 TANC1Q9C0D5 1861 aa20.39■□□□□ 0.85
RFTN1-202ENST00000431547 ARID2Q68CP9 1835 aa20.39■□□□□ 0.85
RFTN1-202ENST00000431547 PDE4DIPQ5VU43 2346 aa20.38■□□□□ 0.85
RFTN1-202ENST00000431547 A0A1W2PPC1 479 aa20.38■□□□□ 0.85
RFTN1-202ENST00000431547 MYMKA6NI61 221 aa20.38■□□□□ 0.85
RFTN1-202ENST00000431547 SFI1A8K8P3 1242 aa20.38■□□□□ 0.85
RFTN1-202ENST00000431547 SLFN14P0C7P3 912 aa20.38■□□□□ 0.85
RFTN1-202ENST00000431547 SFPQP23246 707 aaKnown RBP eCLIP20.38■□□□□ 0.85
RFTN1-202ENST00000431547 SYKP43405 635 aa20.38■□□□□ 0.85
RFTN1-202ENST00000431547 AMPD3Q01432 767 aa20.38■□□□□ 0.85
RFTN1-202ENST00000431547 NFX1Q12986 1120 aaKnown RBP20.38■□□□□ 0.85
RFTN1-202ENST00000431547 PCBP1Q15365 356 aaKnown RBP eCLIP20.38■□□□□ 0.85
RFTN1-202ENST00000431547 TDHQ8IZJ6 230 aa20.38■□□□□ 0.85
RFTN1-202ENST00000431547 DDX12PQ92771 950 aa20.38■□□□□ 0.85
RFTN1-202ENST00000431547 NTPCRQ9BSD7 190 aaKnown RBP20.38■□□□□ 0.85
RFTN1-202ENST00000431547 FTHL17Q9BXU8 183 aa20.38■□□□□ 0.85
RFTN1-202ENST00000431547 MTIF3Q9H2K0 278 aaKnown RBP20.38■□□□□ 0.85
RFTN1-202ENST00000431547 GOLPH3LQ9H4A5 285 aa20.38■□□□□ 0.85
RFTN1-202ENST00000431547 MINDY3Q9H8M7 445 aa20.38■□□□□ 0.85
RFTN1-202ENST00000431547 COLQQ9Y215 455 aaPredicted RBP20.38■□□□□ 0.85
RFTN1-202ENST00000431547 LRRIQ4A6NIV6 560 aa20.37■□□□□ 0.85
RFTN1-202ENST00000431547 RBAK-RBAKDNI3L0D1 243 aa20.37■□□□□ 0.85
RFTN1-202ENST00000431547 CSDE1O75534 798 aaKnown RBP20.37■□□□□ 0.85
RFTN1-202ENST00000431547 PLS3P13797 630 aa20.37■□□□□ 0.85
RFTN1-202ENST00000431547 NPTX2P47972 431 aa20.37■□□□□ 0.85
RFTN1-202ENST00000431547 ZNF131P52739 623 aa20.37■□□□□ 0.85
RFTN1-202ENST00000431547 PEX3P56589 373 aa20.37■□□□□ 0.85
RFTN1-202ENST00000431547 CDCA2Q69YH5 1023 aaPredicted RBP20.37■□□□□ 0.85
RFTN1-202ENST00000431547 SPIRE2Q8WWL2 714 aa20.37■□□□□ 0.85
RFTN1-202ENST00000431547 C2orf40Q9H1Z8 148 aa20.37■□□□□ 0.85
RFTN1-202ENST00000431547 TMX1Q9H3N1 280 aa20.37■□□□□ 0.85
RFTN1-202ENST00000431547 SERTAD1Q9UHV2 236 aa20.37■□□□□ 0.85
RFTN1-202ENST00000431547 ACTN4O43707 911 aaKnown RBP20.36■□□□□ 0.85
RFTN1-202ENST00000431547 CACNB1Q02641 598 aaPredicted RBP20.36■□□□□ 0.85
RFTN1-202ENST00000431547 DMP1Q13316 513 aaPredicted RBP20.36■□□□□ 0.85
RFTN1-202ENST00000431547 LONRF3Q496Y0 759 aa20.36■□□□□ 0.85
RFTN1-202ENST00000431547 TPRNQ4KMQ1 711 aa20.36■□□□□ 0.85
RFTN1-202ENST00000431547 CNNM4Q6P4Q7 775 aa20.36■□□□□ 0.85
RFTN1-202ENST00000431547 DYMQ7RTS9 669 aa20.36■□□□□ 0.85
RFTN1-202ENST00000431547 CEP57L1Q8IYX8 460 aa20.36■□□□□ 0.85
RFTN1-202ENST00000431547 DEPTORQ8TB45 409 aa20.36■□□□□ 0.85
RFTN1-202ENST00000431547 DNAJC19Q96DA6 116 aa20.36■□□□□ 0.85
RFTN1-202ENST00000431547 RNPC3Q96LT9 517 aaKnown RBP20.36■□□□□ 0.85
RFTN1-202ENST00000431547 PARVGQ9HBI0 331 aa20.36■□□□□ 0.85
RFTN1-202ENST00000431547 CXXC1Q9P0U4 656 aaPredicted RBP20.36■□□□□ 0.85
RFTN1-202ENST00000431547 LARSQ9P2J5 1176 aaKnown RBP20.36■□□□□ 0.85
RFTN1-202ENST00000431547 CCDC169A6NNP5 214 aa20.35■□□□□ 0.85
RFTN1-202ENST00000431547 ENPP3O14638 875 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms