RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 DAPK3O43293 454 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 BUB1BO60566 1050 aaPredicted RBP12.25□□□□□ -0.45
USP4-205ENST00000431357 USP8P40818 1118 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 CACNB3P54284 484 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 HADHBP55084 474 aaKnown RBP12.25□□□□□ -0.45
USP4-205ENST00000431357 POU5F1Q01860 360 aaKnown RBP12.25□□□□□ -0.45
USP4-205ENST00000431357 PLS1Q14651 629 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 SHROOM1Q2M3G4 852 aaPredicted RBP12.25□□□□□ -0.45
USP4-205ENST00000431357 SWT1Q5T5J6 900 aaKnown RBP12.25□□□□□ -0.45
USP4-205ENST00000431357 MMS22LQ6ZRQ5 1243 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 DDX42Q86XP3 938 aaKnown RBP eCLIP12.25□□□□□ -0.45
USP4-205ENST00000431357 KIAA0825Q8IV33 1275 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 GLYCTKQ8IVS8 523 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 FAM178BQ8IXR5 827 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 NLGN1Q8N2Q7 840 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 OLIG1Q8TAK6 271 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 CYP2W1Q8TAV3 490 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 MYCBPAPQ8TBZ2 947 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 PIGOQ8TEQ8 1089 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 UBLCP1Q8WVY7 318 aaPredicted RBP12.25□□□□□ -0.45
USP4-205ENST00000431357 MASTLQ96GX5 879 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 INTS2Q9H0H0 1204 aaKnown RBP12.25□□□□□ -0.45
USP4-205ENST00000431357 NEUROG2Q9H2A3 272 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 AGPAT3Q9NRZ7 376 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 ATRNL1Q5VV63 1379 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 ANKRD31Q8N7Z5 1873 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 TTI1O43156 1089 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 GDF11O95390 407 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 FGGP02679 453 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 POLR2MP0CAP2 368 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 ITGA4P13612 1032 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 HSPA6P17066 643 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 CDR1P51861 262 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 PTENP60484 403 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 KIF22Q14807 665 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 TCEAL1Q15170 157 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 DACT2Q5SW24 774 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 TMC3Q7Z5M5 1100 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 RHOT2Q8IXI1 618 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 FIZ1Q96SL8 496 aa12.25□□□□□ -0.45
USP4-205ENST00000431357 COL2A1P02458 1487 aaPredicted RBP12.25□□□□□ -0.45
USP4-205ENST00000431357 MYO1FO00160 1098 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 PFASO15067 1338 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 GAS7O60861 476 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 FSBPO95073 299 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 BCRP11274 1271 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 STAT2P52630 851 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 PPP2R2AP63151 447 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 MYL7Q01449 175 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 DRP2Q13474 957 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 DHX34Q14147 1143 aaKnown RBP12.24□□□□□ -0.45
USP4-205ENST00000431357 ZC2HC1CQ53FD0 456 aaPredicted RBP12.24□□□□□ -0.45
USP4-205ENST00000431357 ARMC9Q7Z3E5 817 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 DNAAF5Q86Y56 855 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 SEPT12Q8IYM1 358 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 NEK9Q8TD19 979 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 PLCD4Q9BRC7 762 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 WDR18Q9BV38 432 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 CENPHQ9H3R5 247 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 DBNDD1Q9H9R9 158 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.24□□□□□ -0.45
USP4-205ENST00000431357 NRXN2Q9P2S2 1712 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 SLC12A6Q9UHW9 1150 aa12.24□□□□□ -0.45
USP4-205ENST00000431357 GMNCA6NCL1 334 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 MIF4GDA9UHW6 222 aaKnown RBP12.23□□□□□ -0.45
USP4-205ENST00000431357 E7EVH7 732 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 P4HA2O15460 535 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 PPFIA2O75334 1257 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 GH2P01242 217 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 KRT13P13646 458 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 GBP1P32455 592 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 HPDP32754 393 aaPredicted RBP12.23□□□□□ -0.45
USP4-205ENST00000431357 DRG2P55039 364 aaKnown RBP12.23□□□□□ -0.45
USP4-205ENST00000431357 GSCP56915 257 aaPredicted RBP12.23□□□□□ -0.45
USP4-205ENST00000431357 SETQ01105 290 aaPredicted RBP12.23□□□□□ -0.45
USP4-205ENST00000431357 CETN1Q12798 172 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 BFSP1Q12934 665 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 ALCAMQ13740 583 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 TMEM174Q8WUU8 243 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 GPR88Q9GZN0 384 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 BCAS3Q9H6U6 928 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 ARHGEF10LQ9HCE6 1279 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 OSGEPQ9NPF4 335 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 PAEPP09466 180 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 MAPTP10636 758 aaKnown RBP12.23□□□□□ -0.45
USP4-205ENST00000431357 CYP2J2P51589 502 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 DR1Q01658 176 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 DHX9Q08211 1270 aaKnown RBP12.23□□□□□ -0.45
USP4-205ENST00000431357 PTPROQ16827 1216 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 CBWD6Q4V339 395 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 CEP55Q53EZ4 464 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 ODF2Q5BJF6 829 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 CBWD3Q5JTY5 395 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 CBWD5Q5RIA9 395 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 ODR4Q5SWX8 454 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 MORC4Q8TE76 937 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 FMO2Q99518 471 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 AGPAT1Q99943 283 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 ERP44Q9BS26 406 aa12.23□□□□□ -0.45
USP4-205ENST00000431357 STRA6Q9BX79 667 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms