RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 PHKA2P46019 1235 aa19.3■□□□□ 0.68
CTDSP1-203ENST00000431127 SARSP49591 514 aaKnown RBP19.3■□□□□ 0.68
CTDSP1-203ENST00000431127 TAP1Q03518 808 aa19.3■□□□□ 0.68
CTDSP1-203ENST00000431127 DSC3Q14574 896 aa19.3■□□□□ 0.68
CTDSP1-203ENST00000431127 PTPAQ15257 358 aa19.3■□□□□ 0.68
CTDSP1-203ENST00000431127 PCBP1Q15365 356 aaKnown RBP eCLIP19.3■□□□□ 0.68
CTDSP1-203ENST00000431127 HYIQ5T013 277 aa19.3■□□□□ 0.68
CTDSP1-203ENST00000431127 FAM173BQ6P4H8 233 aa19.3■□□□□ 0.68
CTDSP1-203ENST00000431127 SP7Q8TDD2 431 aaPredicted RBP19.3■□□□□ 0.68
CTDSP1-203ENST00000431127 CDK5RAP3Q96JB5 506 aa19.3■□□□□ 0.68
CTDSP1-203ENST00000431127 DACT1Q9NYF0 836 aa19.3■□□□□ 0.68
CTDSP1-203ENST00000431127 LRFN2Q9ULH4 789 aa19.3■□□□□ 0.68
CTDSP1-203ENST00000431127 MGEA5O60502 916 aa19.29■□□□□ 0.68
CTDSP1-203ENST00000431127 ZRSR1Q15695 479 aaKnown RBP19.29■□□□□ 0.68
CTDSP1-203ENST00000431127 CRIPAKQ8N1N5 446 aa19.29■□□□□ 0.68
CTDSP1-203ENST00000431127 ZNF396Q96N95 335 aaPredicted RBP19.29■□□□□ 0.68
CTDSP1-203ENST00000431127 POLR3FQ9H1D9 316 aaPredicted RBP19.29■□□□□ 0.68
CTDSP1-203ENST00000431127 PCDHB7Q9Y5E2 793 aa19.29■□□□□ 0.68
CTDSP1-203ENST00000431127 MORC2Q9Y6X9 1032 aaPredicted RBP19.29■□□□□ 0.68
CTDSP1-203ENST00000431127 CUL9Q8IWT3 2517 aa19.29■□□□□ 0.68
CTDSP1-203ENST00000431127 LOXHD1Q8IVV2 1947 aa19.29■□□□□ 0.68
CTDSP1-203ENST00000431127 EYSQ5T1H1 3165 aa19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 ARID2Q68CP9 1835 aa19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 LCHNA4D1U4 455 aa19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 LINC01553A4QN01 128 aa19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 C9IYK1 514 aa19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 CSDE1O75534 798 aaKnown RBP19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 DGKIO75912 1065 aa19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 CEBPZQ03701 1054 aaKnown RBP19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 FAM102BQ5T8I3 360 aa19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 CATSPER4Q7RTX7 472 aa19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 CABP7Q86V35 215 aa19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 ASAP3Q8TDY4 903 aa19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 CALML4Q96GE6 196 aa19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 NFKBIZQ9BYH8 718 aa19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 ELAC1Q9H777 363 aaKnown RBP19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 SRPRBQ9Y5M8 271 aaKnown RBP19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 TTC3P53804 2025 aa19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 GBF1Q92538 1859 aa19.28■□□□□ 0.68
CTDSP1-203ENST00000431127 PTPRSQ13332 1948 aa19.27■□□□□ 0.68
CTDSP1-203ENST00000431127 E9PMD0 336 aa19.27■□□□□ 0.68
CTDSP1-203ENST00000431127 FGFR4P22455 802 aa19.27■□□□□ 0.68
CTDSP1-203ENST00000431127 GLRA2P23416 452 aa19.27■□□□□ 0.68
CTDSP1-203ENST00000431127 PTENP60484 403 aa19.27■□□□□ 0.68
CTDSP1-203ENST00000431127 FAM189BP81408 668 aa19.27■□□□□ 0.68
CTDSP1-203ENST00000431127 NCBP1Q09161 790 aaKnown RBP19.27■□□□□ 0.68
CTDSP1-203ENST00000431127 SLC39A14Q15043 492 aa19.27■□□□□ 0.68
CTDSP1-203ENST00000431127 MAEAQ7L5Y9 396 aa19.27■□□□□ 0.68
CTDSP1-203ENST00000431127 IFNLR1Q8IU57 520 aaPredicted RBP19.27■□□□□ 0.68
CTDSP1-203ENST00000431127 KIFAP3Q92845 792 aa19.27■□□□□ 0.68
CTDSP1-203ENST00000431127 TGS1Q96RS0 853 aaKnown RBP19.27■□□□□ 0.68
CTDSP1-203ENST00000431127 USP28Q96RU2 1077 aa19.27■□□□□ 0.68
CTDSP1-203ENST00000431127 GAS2L1Q99501 681 aaPredicted RBP19.27■□□□□ 0.68
CTDSP1-203ENST00000431127 TMEM161AQ9NX61 479 aa19.27■□□□□ 0.68
CTDSP1-203ENST00000431127 F13A1P00488 732 aa19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 SKIP12755 728 aa19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 MARCKSP29966 332 aaPredicted RBP19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 NASPP49321 788 aaPredicted RBP19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 GRB10Q13322 594 aa19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 CAPSQ13938 189 aa19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 PPP2R5AQ15172 486 aa19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 TMEM119Q4V9L6 283 aa19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 ATL3Q6DD88 541 aa19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 FIBCD1Q8N539 461 aa19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 RASSF8Q8NHQ8 419 aa19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 ZNF689Q96CS4 500 aaPredicted RBP19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 SAMD11Q96NU1 681 aa19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 PNMA5Q96PV4 448 aa19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 TIPINQ9BVW5 301 aa19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 TRAIPQ9BWF2 469 aa19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 PRDM12Q9H4Q4 367 aa19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 GPRC5CQ9NQ84 441 aa19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 FBXO2Q9UK22 296 aaPredicted RBP19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 PIN4Q9Y237 131 aaKnown RBP19.26■□□□□ 0.67
CTDSP1-203ENST00000431127 ADGRA3Q8IWK6 1321 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 PRUNE2Q8WUY3 3088 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 COL4A6Q14031 1691 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 A0A0U1RQF3 1178 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 INO80B-WBP1J3KQ70 363 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 HOXA2O43364 376 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 ERLIN2O94905 339 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 ARHGEF15O94989 841 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 AXLP30530 894 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 ERVK-21P61565 698 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 BTG3Q14201 252 aaPredicted RBP19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 FOXD4L5Q5VV16 416 aaPredicted RBP19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 CMTR2Q8IYT2 770 aaKnown RBP19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 KRI1Q8N9T8 703 aaKnown RBP19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 FOXD4L4Q8WXT5 416 aaPredicted RBP19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 ARNTL2Q8WYA1 636 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 IFT74Q96LB3 600 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 CCSER1Q9C0I3 900 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 CSRNP2Q9H175 543 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 MINDY3Q9H8M7 445 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 RC3H2Q9HBD1 1191 aaKnown RBP19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 AGPAT5Q9NUQ2 364 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 KCND2Q9NZV8 630 aa19.25■□□□□ 0.67
CTDSP1-203ENST00000431127 LRRIQ4A6NIV6 560 aa19.24■□□□□ 0.67
CTDSP1-203ENST00000431127 EOMESO95936 686 aa19.24■□□□□ 0.67
CTDSP1-203ENST00000431127 IBSPP21815 317 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms