RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 DDX3XO00571 662 aaKnown RBP eCLIP15.22■□□□□ 0.03
HOXC4-202ENST00000430889 PMM2O15305 246 aa15.22■□□□□ 0.03
HOXC4-202ENST00000430889 NR3C2P08235 984 aa15.22■□□□□ 0.03
HOXC4-202ENST00000430889 ZBTB48P10074 688 aaPredicted RBP15.22■□□□□ 0.03
HOXC4-202ENST00000430889 KCNA2P16389 499 aa15.22■□□□□ 0.03
HOXC4-202ENST00000430889 CCND2P30279 289 aa15.22■□□□□ 0.03
HOXC4-202ENST00000430889 SOX5P35711 763 aa15.22■□□□□ 0.03
HOXC4-202ENST00000430889 FAM193AP78312 1265 aa15.22■□□□□ 0.03
HOXC4-202ENST00000430889 SMC1AQ14683 1233 aaKnown RBP15.22■□□□□ 0.03
HOXC4-202ENST00000430889 TMEM132BQ14DG7 1078 aa15.22■□□□□ 0.03
HOXC4-202ENST00000430889 CATSPERGQ6ZRH7 1159 aa15.22■□□□□ 0.03
HOXC4-202ENST00000430889 LRRC57Q8N9N7 239 aa15.22■□□□□ 0.03
HOXC4-202ENST00000430889 SPATA4Q8NEY3 305 aa15.22■□□□□ 0.03
HOXC4-202ENST00000430889 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.22■□□□□ 0.03
HOXC4-202ENST00000430889 SUGCTQ9HAC7 445 aa15.22■□□□□ 0.03
HOXC4-202ENST00000430889 PICK1Q9NRD5 415 aa15.22■□□□□ 0.03
HOXC4-202ENST00000430889 INTUQ9ULD6 942 aa15.22■□□□□ 0.03
HOXC4-202ENST00000430889 USP20Q9Y2K6 914 aa15.22■□□□□ 0.03
HOXC4-202ENST00000430889 SIP14410 1827 aa15.21■□□□□ 0.03
HOXC4-202ENST00000430889 MYPNQ86TC9 1320 aa15.21■□□□□ 0.03
HOXC4-202ENST00000430889 TISP43B9A030 160 aa15.21■□□□□ 0.03
HOXC4-202ENST00000430889 MAFGO15525 162 aa15.21■□□□□ 0.03
HOXC4-202ENST00000430889 MCM3P25205 808 aa15.21■□□□□ 0.03
HOXC4-202ENST00000430889 STAT1P42224 750 aa15.21■□□□□ 0.03
HOXC4-202ENST00000430889 HMGCS2P54868 508 aa15.21■□□□□ 0.03
HOXC4-202ENST00000430889 MYL7Q01449 175 aa15.21■□□□□ 0.03
HOXC4-202ENST00000430889 PRAMEF18Q5VWM3 479 aa15.21■□□□□ 0.03
HOXC4-202ENST00000430889 SNRNP48Q6IEG0 339 aaKnown RBP15.21■□□□□ 0.03
HOXC4-202ENST00000430889 LNX1Q8TBB1 728 aaPredicted RBP15.21■□□□□ 0.03
HOXC4-202ENST00000430889 CAGE1Q8TC20 777 aa15.21■□□□□ 0.03
HOXC4-202ENST00000430889 MOV10L1Q9BXT6 1211 aaKnown RBP15.21■□□□□ 0.03
HOXC4-202ENST00000430889 GPRC5DQ9NZD1 345 aa15.21■□□□□ 0.03
HOXC4-202ENST00000430889 RNF14Q9UBS8 474 aa15.21■□□□□ 0.03
HOXC4-202ENST00000430889 FZD1Q9UP38 647 aa15.21■□□□□ 0.03
HOXC4-202ENST00000430889 SAMM50Q9Y512 469 aa15.21■□□□□ 0.03
HOXC4-202ENST00000430889 CTDP1Q9Y5B0 961 aaPredicted RBP15.21■□□□□ 0.03
HOXC4-202ENST00000430889 NFASCO94856 1347 aa15.21■□□□□ 0.02
HOXC4-202ENST00000430889 MYH9P35579 1960 aaKnown RBP15.2■□□□□ 0.02
HOXC4-202ENST00000430889 LRRC37A2A6NM11 1700 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 A0A0A6YYK5 440 aaPredicted RBP15.2■□□□□ 0.02
HOXC4-202ENST00000430889 H3BQF6 201 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 P4HA2O15460 535 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 EVI5O60447 810 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 EXOC3O60645 756 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 RFX1P22670 979 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 HIRAP54198 1017 aaPredicted RBP15.2■□□□□ 0.02
HOXC4-202ENST00000430889 DRAP1Q14919 205 aaPredicted RBP15.2■□□□□ 0.02
HOXC4-202ENST00000430889 ENOX2Q16206 610 aaKnown RBP15.2■□□□□ 0.02
HOXC4-202ENST00000430889 EPC2Q52LR7 807 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 SH3D19Q5HYK7 790 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 ALKBH5Q6P6C2 394 aaKnown RBP15.2■□□□□ 0.02
HOXC4-202ENST00000430889 INTS8Q75QN2 995 aaKnown RBP15.2■□□□□ 0.02
HOXC4-202ENST00000430889 ANO5Q75V66 913 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 MAEAQ7L5Y9 396 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 HAUS6Q7Z4H7 955 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 SYCP3Q8IZU3 236 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 SLC17A8Q8NDX2 589 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 PLEKHO2Q8TD55 490 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 CBWD1Q9BRT8 395 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 GPRC5CQ9NQ84 441 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 PDLIM7Q9NR12 457 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 APEX2Q9UBZ4 518 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 DNAJC12Q9UKB3 198 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 AFG3L2Q9Y4W6 797 aa15.2■□□□□ 0.02
HOXC4-202ENST00000430889 TESPA1A2RU30 521 aaPredicted RBP15.19■□□□□ 0.02
HOXC4-202ENST00000430889 CES2O00748 559 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 ZNF862O60290 1169 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 OAS2P29728 719 aaKnown RBP15.19■□□□□ 0.02
HOXC4-202ENST00000430889 CXCR5P32302 372 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 NPEPPSP55786 919 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 DLG4P78352 724 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 CASP8Q14790 479 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 PLA2G4FQ68DD2 849 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 SLFN11Q7Z7L1 901 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 TMEM161BQ8NDZ6 487 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.19■□□□□ 0.02
HOXC4-202ENST00000430889 HVCN1Q96D96 273 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 CYP39A1Q9NYL5 469 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 SMARCAL1Q9NZC9 954 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 HSPBP1Q9NZL4 362 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 EHD2Q9NZN4 543 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 PPP1R1BQ9UD71 204 aaPredicted RBP15.19■□□□□ 0.02
HOXC4-202ENST00000430889 PCDHA10Q9Y5I2 948 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 NCANO14594 1321 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 ZC3H4Q9UPT8 1303 aaKnown RBP15.19■□□□□ 0.02
HOXC4-202ENST00000430889 SPDYE16A6NNV3 312 aaPredicted RBP15.19■□□□□ 0.02
HOXC4-202ENST00000430889 FTCDO95954 541 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 MYBL2P10244 700 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 PPP3CAQ08209 521 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 KIF22Q14807 665 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 PHLDB3Q6NSJ2 640 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 CCNI2Q6ZMN8 369 aaPredicted RBP15.19■□□□□ 0.02
HOXC4-202ENST00000430889 NLRX1Q86UT6 975 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 ZSWIM2Q8NEG5 633 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 NSUN6Q8TEA1 469 aaKnown RBP15.19■□□□□ 0.02
HOXC4-202ENST00000430889 SH2D3AQ9BRG2 576 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 NTPCRQ9BSD7 190 aaKnown RBP15.19■□□□□ 0.02
HOXC4-202ENST00000430889 TEX13BQ9BXU2 312 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 VIPAS39Q9H9C1 493 aa15.19■□□□□ 0.02
HOXC4-202ENST00000430889 A1CFQ9NQ94 594 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms