RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 MYO9BQ13459 2157 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 A0A0U1RQF3 1178 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 HOXA2O43364 376 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 CSDE1O75534 798 aaKnown RBP10.93□□□□□ -0.66
HDAC6-207ENST00000430858 PDCP20941 246 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 IBSPP21815 317 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-207ENST00000430858 FGFR4P22455 802 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 CTNNB1P35222 781 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 POU5F1BQ06416 359 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 LAMTOR4Q0VGL1 99 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 GPM6BQ13491 265 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 PTPROQ16827 1216 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 DTHD1Q6ZMT9 781 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 KSR1Q8IVT5 923 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 IGSF22Q8N9C0 903 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 RNF149Q8NC42 400 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 INTS4Q96HW7 963 aaKnown RBP10.93□□□□□ -0.66
HDAC6-207ENST00000430858 C11orf84Q9BUA3 381 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-207ENST00000430858 TRAIPQ9BWF2 469 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 PLVAPQ9BX97 442 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 XPNPEP1Q9NQW7 623 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 LRWD1Q9UFC0 647 aa10.93□□□□□ -0.66
HDAC6-207ENST00000430858 USO1O60763 962 aaKnown RBP10.92□□□□□ -0.66
HDAC6-207ENST00000430858 EOMESO95936 686 aa10.92□□□□□ -0.66
HDAC6-207ENST00000430858 SRGAP2CP0DJJ0 459 aa10.92□□□□□ -0.66
HDAC6-207ENST00000430858 SKIP12755 728 aa10.92□□□□□ -0.66
HDAC6-207ENST00000430858 HOXD11P31277 338 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-207ENST00000430858 CCT6AP40227 531 aaKnown RBP10.92□□□□□ -0.66
HDAC6-207ENST00000430858 ATP2C1P98194 919 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-207ENST00000430858 TFDP1Q14186 410 aa10.92□□□□□ -0.66
HDAC6-207ENST00000430858 PCBP1Q15365 356 aaKnown RBP eCLIP10.92□□□□□ -0.66
HDAC6-207ENST00000430858 PAN2Q504Q3 1202 aaKnown RBP10.92□□□□□ -0.66
HDAC6-207ENST00000430858 NAALADL2Q58DX5 795 aa10.92□□□□□ -0.66
HDAC6-207ENST00000430858 POTEGQ6S5H5 508 aa10.92□□□□□ -0.66
HDAC6-207ENST00000430858 CATSPER4Q7RTX7 472 aa10.92□□□□□ -0.66
HDAC6-207ENST00000430858 BRAPQ7Z569 592 aa10.92□□□□□ -0.66
HDAC6-207ENST00000430858 ECHDC2Q86YB7 292 aa10.92□□□□□ -0.66
HDAC6-207ENST00000430858 MCPH1Q8NEM0 835 aa10.92□□□□□ -0.66
HDAC6-207ENST00000430858 RSPH1Q8WYR4 309 aa10.92□□□□□ -0.66
HDAC6-207ENST00000430858 MRPL38Q96DV4 380 aaKnown RBP10.92□□□□□ -0.66
HDAC6-207ENST00000430858 THEGQ9P2T0 379 aa10.92□□□□□ -0.66
HDAC6-207ENST00000430858 PIN4Q9Y237 131 aaKnown RBP10.92□□□□□ -0.66
HDAC6-207ENST00000430858 MRPL42Q9Y6G3 142 aaKnown RBP10.92□□□□□ -0.66
HDAC6-207ENST00000430858 A0A087WWV3 80 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 ARHGEF35A5YM69 484 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 TBKBP1A7MCY6 615 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 K7ELQ4 463 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-207ENST00000430858 FGFR1P11362 822 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 ARL2P36404 184 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 PHKA2P46019 1235 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 GATMP50440 423 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 RAB27AP51159 221 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 PTENP60484 403 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 SKIV2LQ15477 1246 aaKnown RBP10.91□□□□□ -0.66
HDAC6-207ENST00000430858 FAM102BQ5T8I3 360 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 KRT79Q5XKE5 535 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 ARL6IP4Q66PJ3 421 aaKnown RBP10.91□□□□□ -0.66
HDAC6-207ENST00000430858 TWF2Q6IBS0 349 aaKnown RBP10.91□□□□□ -0.66
HDAC6-207ENST00000430858 IFNLR1Q8IU57 520 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-207ENST00000430858 ABI1Q8IZP0 508 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 SNX29Q8TEQ0 813 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 ATXN2LQ8WWM7 1075 aaKnown RBP10.91□□□□□ -0.66
HDAC6-207ENST00000430858 P2RX5Q93086 422 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 NFKBIZQ9BYH8 718 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 TMEM117Q9H0C3 514 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 LMAN2LQ9H0V9 348 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 AAASQ9NRG9 546 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 AGPAT5Q9NUQ2 364 aa10.91□□□□□ -0.66
HDAC6-207ENST00000430858 LOXHD1Q8IVV2 1947 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 ERLIN2O94905 339 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 BMP15O95972 392 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 CYP11B2P19099 503 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 GLRA2P23416 452 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 AXLP30530 894 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 IL17AQ16552 155 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 ECM1Q16610 540 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 CSPP1Q1MSJ5 1256 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 TIGD5Q53EQ6 642 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 SPOUT1Q5T280 376 aaKnown RBP10.9□□□□□ -0.66
HDAC6-207ENST00000430858 PADI6Q6TGC4 694 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 ZNF598Q86UK7 904 aaKnown RBP10.9□□□□□ -0.66
HDAC6-207ENST00000430858 ASAP3Q8TDY4 903 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 SNX21Q969T3 373 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 CASD1Q96PB1 797 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 POLR3FQ9H1D9 316 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-207ENST00000430858 MINDY3Q9H8M7 445 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 PRDM6Q9NQX0 595 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 FAM105AQ9NUU6 356 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 TYW1Q9NV66 732 aaKnown RBP10.9□□□□□ -0.66
HDAC6-207ENST00000430858 COG5Q9UP83 839 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 KIAA1024Q9UPX6 916 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 CHD7Q9P2D1 2997 aa10.9□□□□□ -0.66
HDAC6-207ENST00000430858 CHD9Q3L8U1 2897 aa10.9□□□□□ -0.67
HDAC6-207ENST00000430858 VPS37CA5D8V6 355 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-207ENST00000430858 INO80B-WBP1J3KQ70 363 aa10.89□□□□□ -0.67
HDAC6-207ENST00000430858 GRM6O15303 877 aa10.89□□□□□ -0.67
HDAC6-207ENST00000430858 ZNF623O75123 536 aa10.89□□□□□ -0.67
HDAC6-207ENST00000430858 ATF7P17544 494 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-207ENST00000430858 LAG3P18627 525 aa10.89□□□□□ -0.67
HDAC6-207ENST00000430858 HOXA11P31270 313 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms