RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 TECTAO75443 2155 aa16.74■□□□□ 0.27
MSH5-208ENST00000429846 DKC1O60832 514 aaKnown RBP eCLIP16.73■□□□□ 0.27
MSH5-208ENST00000429846 SKIP12755 728 aa16.73■□□□□ 0.27
MSH5-208ENST00000429846 XBP1P17861 261 aa16.73■□□□□ 0.27
MSH5-208ENST00000429846 PSMC5P62195 406 aa16.73■□□□□ 0.27
MSH5-208ENST00000429846 KCNC3Q14003 757 aa16.73■□□□□ 0.27
MSH5-208ENST00000429846 CLLU1OSQ5K130 101 aa16.73■□□□□ 0.27
MSH5-208ENST00000429846 RNF169Q8NCN4 708 aa16.73■□□□□ 0.27
MSH5-208ENST00000429846 VN1R2Q8NFZ6 395 aa16.73■□□□□ 0.27
MSH5-208ENST00000429846 EDAQ92838 391 aa16.73■□□□□ 0.27
MSH5-208ENST00000429846 ZNF668Q96K58 619 aaPredicted RBP16.73■□□□□ 0.27
MSH5-208ENST00000429846 MFSD14AQ96MC6 490 aa16.73■□□□□ 0.27
MSH5-208ENST00000429846 SPG21Q9NZD8 308 aa16.73■□□□□ 0.27
MSH5-208ENST00000429846 PPME1Q9Y570 386 aa16.73■□□□□ 0.27
MSH5-208ENST00000429846 STK36Q9NRP7 1315 aa16.72■□□□□ 0.27
MSH5-208ENST00000429846 STBD1O95210 358 aa16.72■□□□□ 0.27
MSH5-208ENST00000429846 GCFC2P16383 781 aaKnown RBP16.72■□□□□ 0.27
MSH5-208ENST00000429846 HOXB8P17481 243 aaPredicted RBP16.72■□□□□ 0.27
MSH5-208ENST00000429846 PPP2R5CQ13362 524 aa16.72■□□□□ 0.27
MSH5-208ENST00000429846 DRP2Q13474 957 aa16.72■□□□□ 0.27
MSH5-208ENST00000429846 BMS1Q14692 1282 aaKnown RBP16.72■□□□□ 0.27
MSH5-208ENST00000429846 INF2Q27J81 1249 aa16.72■□□□□ 0.27
MSH5-208ENST00000429846 HFE2Q6ZVN8 426 aa16.72■□□□□ 0.27
MSH5-208ENST00000429846 TMC7Q7Z402 723 aa16.72■□□□□ 0.27
MSH5-208ENST00000429846 EXOC8Q8IYI6 725 aa16.72■□□□□ 0.27
MSH5-208ENST00000429846 SLC39A11Q8N1S5 342 aa16.72■□□□□ 0.27
MSH5-208ENST00000429846 HELQQ8TDG4 1101 aa16.72■□□□□ 0.27
MSH5-208ENST00000429846 FAM20AQ96MK3 541 aa16.72■□□□□ 0.27
MSH5-208ENST00000429846 PDRG1Q9NUG6 133 aa16.72■□□□□ 0.27
MSH5-208ENST00000429846 A0A087WZ62 844 aa16.71■□□□□ 0.27
MSH5-208ENST00000429846 CCDC194A0A1B0GVG4 234 aa16.71■□□□□ 0.27
MSH5-208ENST00000429846 MAFO75444 373 aaPredicted RBP16.71■□□□□ 0.27
MSH5-208ENST00000429846 FGFR4P22455 802 aa16.71■□□□□ 0.27
MSH5-208ENST00000429846 PHKA2P46019 1235 aa16.71■□□□□ 0.27
MSH5-208ENST00000429846 ALDH7A1P49419 539 aaKnown RBP16.71■□□□□ 0.27
MSH5-208ENST00000429846 RAB27AP51159 221 aa16.71■□□□□ 0.27
MSH5-208ENST00000429846 STK3Q13188 491 aa16.71■□□□□ 0.27
MSH5-208ENST00000429846 SMC1AQ14683 1233 aaKnown RBP16.71■□□□□ 0.27
MSH5-208ENST00000429846 PPP4R3AQ6IN85 833 aa16.71■□□□□ 0.27
MSH5-208ENST00000429846 ANKRD54Q6NXT1 300 aa16.71■□□□□ 0.27
MSH5-208ENST00000429846 ANO5Q75V66 913 aa16.71■□□□□ 0.27
MSH5-208ENST00000429846 BMP8AQ7Z5Y6 402 aa16.71■□□□□ 0.27
MSH5-208ENST00000429846 NEK8Q86SG6 692 aa16.71■□□□□ 0.27
MSH5-208ENST00000429846 AIFM3Q96NN9 605 aa16.71■□□□□ 0.27
MSH5-208ENST00000429846 NAP1L4Q99733 375 aaKnown RBP16.71■□□□□ 0.27
MSH5-208ENST00000429846 FDXACB1Q9BRP7 624 aaPredicted RBP16.71■□□□□ 0.27
MSH5-208ENST00000429846 PHF20Q9BVI0 1012 aa16.71■□□□□ 0.27
MSH5-208ENST00000429846 SUCLA2Q9P2R7 463 aaPredicted RBP16.71■□□□□ 0.27
MSH5-208ENST00000429846 TMEM150BA6NC51 233 aa16.7■□□□□ 0.26
MSH5-208ENST00000429846 DDX11L8A8MPP1 907 aa16.7■□□□□ 0.26
MSH5-208ENST00000429846 HIDE1A8MVS5 230 aa16.7■□□□□ 0.26
MSH5-208ENST00000429846 TBX3O15119 743 aa16.7■□□□□ 0.26
MSH5-208ENST00000429846 SLC37A4O43826 429 aa16.7■□□□□ 0.26
MSH5-208ENST00000429846 PBX3P40426 434 aa16.7■□□□□ 0.26
MSH5-208ENST00000429846 TECP42680 631 aa16.7■□□□□ 0.26
MSH5-208ENST00000429846 QARSP47897 775 aaKnown RBP16.7■□□□□ 0.26
MSH5-208ENST00000429846 RBM10P98175 930 aaKnown RBP16.7■□□□□ 0.26
MSH5-208ENST00000429846 LETM2Q2VYF4 491 aa16.7■□□□□ 0.26
MSH5-208ENST00000429846 TWF2Q6IBS0 349 aaKnown RBP16.7■□□□□ 0.26
MSH5-208ENST00000429846 RHPN2Q8IUC4 686 aa16.7■□□□□ 0.26
MSH5-208ENST00000429846 SLC7A3Q8WY07 619 aa16.7■□□□□ 0.26
MSH5-208ENST00000429846 CASP10Q92851 521 aa16.7■□□□□ 0.26
MSH5-208ENST00000429846 TMEM169Q96HH4 297 aa16.7■□□□□ 0.26
MSH5-208ENST00000429846 S1PR5Q9H228 398 aa16.7■□□□□ 0.26
MSH5-208ENST00000429846 KCNMB3Q9NPA1 279 aa16.7■□□□□ 0.26
MSH5-208ENST00000429846 PIN4Q9Y237 131 aaKnown RBP16.7■□□□□ 0.26
MSH5-208ENST00000429846 ARID2Q68CP9 1835 aa16.7■□□□□ 0.26
MSH5-208ENST00000429846 C2orf71A6NGG8 1288 aa16.69■□□□□ 0.26
MSH5-208ENST00000429846 CSDE1O75534 798 aaKnown RBP16.69■□□□□ 0.26
MSH5-208ENST00000429846 BCAR1P56945 870 aa16.69■□□□□ 0.26
MSH5-208ENST00000429846 ZXDAP98168 799 aa16.69■□□□□ 0.26
MSH5-208ENST00000429846 SCRN1Q12765 414 aa16.69■□□□□ 0.26
MSH5-208ENST00000429846 TPRNQ4KMQ1 711 aa16.69■□□□□ 0.26
MSH5-208ENST00000429846 TRIM67Q6ZTA4 783 aa16.69■□□□□ 0.26
MSH5-208ENST00000429846 RPGRIP1Q96KN7 1286 aa16.69■□□□□ 0.26
MSH5-208ENST00000429846 NLRP4Q96MN2 994 aa16.69■□□□□ 0.26
MSH5-208ENST00000429846 SH2D3AQ9BRG2 576 aa16.69■□□□□ 0.26
MSH5-208ENST00000429846 LARP6Q9BRS8 491 aaKnown RBP16.69■□□□□ 0.26
MSH5-208ENST00000429846 SLKQ9H2G2 1235 aaPredicted RBP16.69■□□□□ 0.26
MSH5-208ENST00000429846 CYP26B1Q9NR63 512 aa16.69■□□□□ 0.26
MSH5-208ENST00000429846 VAV3Q9UKW4 847 aa16.69■□□□□ 0.26
MSH5-208ENST00000429846 KCNJ14Q9UNX9 436 aa16.69■□□□□ 0.26
MSH5-208ENST00000429846 GAS2O43903 313 aaKnown RBP16.68■□□□□ 0.26
MSH5-208ENST00000429846 ZNF623O75123 536 aa16.68■□□□□ 0.26
MSH5-208ENST00000429846 P4HBP07237 508 aaKnown RBP16.68■□□□□ 0.26
MSH5-208ENST00000429846 RFC5P40937 340 aa16.68■□□□□ 0.26
MSH5-208ENST00000429846 ITIH3Q06033 890 aa16.68■□□□□ 0.26
MSH5-208ENST00000429846 GIT2Q14161 759 aa16.68■□□□□ 0.26
MSH5-208ENST00000429846 PLA2G4FQ68DD2 849 aa16.68■□□□□ 0.26
MSH5-208ENST00000429846 LLGL2Q6P1M3 1020 aa16.68■□□□□ 0.26
MSH5-208ENST00000429846 SYCE2Q6PIF2 218 aa16.68■□□□□ 0.26
MSH5-208ENST00000429846 GLB1LQ6UWU2 654 aa16.68■□□□□ 0.26
MSH5-208ENST00000429846 CATSPER4Q7RTX7 472 aa16.68■□□□□ 0.26
MSH5-208ENST00000429846 MRPL43Q8N983 215 aaKnown RBP16.68■□□□□ 0.26
MSH5-208ENST00000429846 FBXL18Q96ME1 805 aa16.68■□□□□ 0.26
MSH5-208ENST00000429846 NECTIN4Q96NY8 510 aa16.68■□□□□ 0.26
MSH5-208ENST00000429846 FAM105AQ9NUU6 356 aa16.68■□□□□ 0.26
MSH5-208ENST00000429846 STK39Q9UEW8 545 aa16.68■□□□□ 0.26
MSH5-208ENST00000429846 COL4A3BPQ9Y5P4 624 aa16.68■□□□□ 0.26
MSH5-208ENST00000429846 HCFC2Q9Y5Z7 792 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms