RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 NPEPPSP55786 919 aa18.39■□□□□ 0.53
SMARCA4-203ENST00000429416 DNAAF3Q8N9W5 541 aa18.39■□□□□ 0.53
SMARCA4-203ENST00000429416 MOCS2O96007 188 aaPredicted RBP18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 ACTR2P61160 394 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 PPATQ06203 517 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 PDIA5Q14554 519 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 SMC6Q96SB8 1091 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 AGAP1Q9UPQ3 857 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 PRG3Q9Y2Y8 225 aaPredicted RBP18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 NOC2LQ9Y3T9 749 aaKnown RBP18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 KIF1AQ12756 1690 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 PRRG1O14668 218 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 TUBB2AQ13885 445 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 TMEM35BQ8NCS4 154 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 TUBB2BQ9BVA1 445 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 ZWILCHQ9H900 591 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 DDX4Q9NQI0 724 aaKnown RBP18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 MOSPD1Q9UJG1 213 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 TRIM49P0CI25 452 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 TRIM49CP0CI26 452 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 PRCPP42785 496 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 WDR72Q3MJ13 1102 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 DEFB128Q7Z7B8 93 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 TRPM4Q8TD43 1214 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 DPH5Q9H2P9 285 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 IPO11Q9UI26 975 aaKnown RBP18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 PTPN22Q9Y2R2 807 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 GBP1P32455 592 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 KYAT1Q16773 422 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 HS1BP3Q53T59 392 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 TCP11X2Q5H9J9 407 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 GPRASP2Q96D09 838 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 TRPC7Q9HCX4 862 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 UBN1Q9NPG3 1134 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 STRIP2Q9ULQ0 834 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 SNX9Q9Y5X1 595 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 NFIBO00712 420 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 PSMA2P25787 234 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 RIT2Q99578 217 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 ADAM22Q9P0K1 906 aa18.38■□□□□ 0.53
SMARCA4-203ENST00000429416 GRIK1P39086 918 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 RGMBQ6NW40 437 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 HSPH1Q92598 858 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 PPP2R2CQ9Y2T4 447 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 TAF6LQ9Y6J9 622 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 CNTNAP5Q8WYK1 1306 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 C2CD2LO14523 706 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 NEMP1O14524 444 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 ZFPM1Q8IX07 1006 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 TBX3O15119 743 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 SRGAP2BP0DMP2 458 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 RFC5P40937 340 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 CPLX4Q7Z7G2 160 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 RAG1P15918 1043 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 KCNH2Q12809 1159 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 KRT39Q6A163 491 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 SPATA2LQ8IUW3 424 aaPredicted RBP18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 ARFGAP2Q8N6H7 521 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 NCAPGQ9BPX3 1015 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 PPP1R12CQ9BZL4 782 aa18.37■□□□□ 0.53
SMARCA4-203ENST00000429416 ASAP2O43150 1006 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 NNMTP40261 264 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 LRRC31Q6UY01 552 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 KIAA1683Q9H0B3 1180 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 HMX1Q9NP08 348 aaPredicted RBP18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 KCNA4P22459 653 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 NOGQ13253 232 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 KRT31Q15323 416 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 PAN2Q504Q3 1202 aaKnown RBP18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 TOGARAM2Q6ZUX3 1019 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 CDR2LQ86X02 465 aaPredicted RBP18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 ATP2A3Q93084 1043 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 DDX41Q9UJV9 622 aaKnown RBP18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 MCF2LO15068 1137 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 DSG3P32926 999 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 EIF4A3P38919 411 aaKnown RBP18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 SNX1Q13596 522 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 MRFAP1L1Q96HT8 127 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 ADAMTS1Q9UHI8 967 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 HEXIM1O94992 359 aaKnown RBP18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 GTF2F1P35269 517 aaKnown RBP eCLIP18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 KRT17Q04695 432 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 BFSP2Q13515 415 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 MUM1L1Q5H9M0 696 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 NWD1Q149M9 1564 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 ADORA2AP29274 412 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 SHMT1P34896 483 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 ALDH7A1P49419 539 aaKnown RBP18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 ZNF449Q6P9G9 518 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 ZMYND12Q9H0C1 365 aa18.36■□□□□ 0.53
SMARCA4-203ENST00000429416 CASP7P55210 303 aa18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 ACCSLQ4AC99 568 aa18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 ARHGEF28Q8N1W1 1705 aaKnown RBP18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 UBE4BO95155 1302 aa18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 PRR29P0C7W0 189 aa18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 ATF2P15336 505 aa18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 DARS2Q6PI48 645 aaKnown RBP18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 NAALADL2Q58DX5 795 aa18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 PPM1EQ8WY54 764 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 238.6 ms