RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 CHP1Q99653 195 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 FAM217BQ9NTX9 383 aaPredicted RBP15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 GMEB1Q9Y692 573 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 RIC1Q4ADV7 1423 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 ARFGEF2Q9Y6D5 1785 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 GYPCP04921 128 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 OR52Z1P0C646 297 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 VHLP40337 213 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 TNFAIP1Q13829 316 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 KPNB1Q14974 876 aaKnown RBP15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 PIGOQ8TEQ8 1089 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 GFM2Q969S9 779 aaKnown RBP15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 EIF2AQ9BY44 585 aaKnown RBP15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 INTS13Q9NVM9 706 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 MYO3BQ8WXR4 1341 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 TMEM110-MUSTN1A8MSY1 372 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 USP17L8P0C7I0 530 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 ZCCHC18P0CG32 403 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 MTTPP55157 894 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 CYP27A1Q02318 531 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 AGBL2Q5U5Z8 902 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 FAM133AQ8N9E0 248 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 SYT15Q9BQS2 421 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 SUN2Q9UH99 717 aa15.5■□□□□ 0.07
SYNGAP1-203ENST00000428982 TCRBV5S4A2TA0A5A2 114 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 ORC2Q13416 577 aaPredicted RBP15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 SGSM1Q2NKQ1 1148 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 DENND2CQ68D51 928 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 ZNF280DQ6N043 979 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 NFRKBQ6P4R8 1299 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 VPS52Q8N1B4 723 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 MDM1Q8TC05 714 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 SH3RF3Q8TEJ3 882 aaPredicted RBP15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 CNOT6LQ96LI5 555 aaKnown RBP15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 USP15Q9Y4E8 981 aaPredicted RBP15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 PDLIM1O00151 329 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 TXNDC9O14530 226 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 ATP9AO75110 1047 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 GNA14O95837 355 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 THOC7Q6I9Y2 204 aaKnown RBP15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 RBBP8NLQ8NC74 664 aaPredicted RBP15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 NDEL1Q9GZM8 345 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 COMMD3-BMI1R4GMX3 469 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 CYP2D7A0A087X1C5 515 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 CIAPIN1Q6FI81 312 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 TRIM31Q9BZY9 425 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 CIDEBQ9UHD4 219 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 NID2Q14112 1375 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 ATP5HO75947 161 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 PLEKHA8P1O95397 391 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 FAM163BP0C2L3 166 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 CHN1P15882 459 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 CDC25AP30304 524 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 ERVK-24P63145 666 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 PDE1BQ01064 536 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 RCN1Q15293 331 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 DGKHQ86XP1 1220 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 ANKRD42Q8N9B4 389 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 MTFR1LQ9H019 292 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 RNPEPL1Q9HAU8 725 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 DCP1AQ9NPI6 582 aaPredicted RBP15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 BTBD7Q9P203 1132 aa15.49■□□□□ 0.07
SYNGAP1-203ENST00000428982 MOCS3O95396 460 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 ITIH3Q06033 890 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 LETM2Q2VYF4 491 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 MIER3Q7Z3K6 550 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 LRRC34Q8IZ02 419 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 PNMA1Q8ND90 353 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 SH2D4AQ9H788 454 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 NHEJ1Q9H9Q4 299 aaPredicted RBP15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 SPON1Q9HCB6 807 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 PCDH18Q9HCL0 1135 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 LRWD1Q9UFC0 647 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 PALM3A6NDB9 673 aaPredicted RBP15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 PENKP01210 267 aaPredicted RBP15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 ARPC4P59998 168 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 RASSF7Q02833 373 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 DHX9Q08211 1270 aaKnown RBP15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 SH3RF1Q7Z6J0 888 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 AKT1S1Q96B36 256 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 UTP11Q9Y3A2 253 aaKnown RBP15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 ITGB4P16144 1822 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 DPEP1P16444 411 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 CRKP46108 304 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 VPS41P49754 854 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 SPATA20Q8TB22 786 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 STK32AQ8WU08 396 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 LENG1Q96BZ8 264 aaPredicted RBP15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 NKIRAS1Q9NYS0 192 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 RABL2BQ9UNT1 228 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 RABGAP1Q9Y3P9 1069 aa15.48■□□□□ 0.07
SYNGAP1-203ENST00000428982 PRCPP42785 496 aa15.47■□□□□ 0.07
SYNGAP1-203ENST00000428982 EIF3BP55884 814 aaKnown RBP15.47■□□□□ 0.07
SYNGAP1-203ENST00000428982 GRIN1Q05586 938 aa15.47■□□□□ 0.07
SYNGAP1-203ENST00000428982 ZNF277Q9NRM2 450 aaPredicted RBP15.47■□□□□ 0.07
SYNGAP1-203ENST00000428982 STK17AQ9UEE5 414 aa15.47■□□□□ 0.07
SYNGAP1-203ENST00000428982 POLLQ9UGP5 575 aa15.47■□□□□ 0.07
SYNGAP1-203ENST00000428982 SERPINB13Q9UIV8 391 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms