RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 STIM1Q13586 685 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 CAPSQ13938 189 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 MXD4Q14582 209 aaPredicted RBP8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 ZNF658Q5TYW1 1059 aaPredicted RBP8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 KLHL10Q6JEL2 608 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 RSPH3Q86UC2 560 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 SERINC5Q86VE9 423 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 KSR1Q8IVT5 923 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 ZBTB8OSQ8IWT0 167 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 LINC01465Q8N7H1 131 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 RNF149Q8NC42 400 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 KIAA0895Q8NCT3 520 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 GLIS3Q8NEA6 775 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 NLRP7Q8WX94 980 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 ZNF668Q96K58 619 aaPredicted RBP8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 FGFBP2Q9BYJ0 223 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 TRPV6Q9H1D0 765 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 TSPY26PQ9H489 355 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 C17orf75Q9HAS0 396 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 KMT5AQ9NQR1 393 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 OLFML3Q9NRN5 406 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 DACH1Q9UI36 760 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 MAPK8IP1Q9UQF2 711 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 GINS2Q9Y248 185 aa8.73□□□□□ -1.01
HMGA1P4-201ENST00000428643 SMIM35A0A1B0GVV1 85 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 H0YCG3 227 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 M0QZ92 97 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 PSMA7O14818 248 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 KIF20AO95235 890 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 BMP6P22004 513 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 MNX1P50219 401 aaPredicted RBP8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 NCKAP1LP55160 1127 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 ZNF445P59923 1031 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 ADAM17P78536 824 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 EHHADHQ08426 723 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 ALCAMQ13740 583 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 ANO6Q4KMQ2 910 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 LRSAM1Q6UWE0 723 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 C11orf57Q6ZUT1 292 aaPredicted RBP8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 KIAA0319LQ8IZA0 1049 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 MYOCDQ8IZQ8 938 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 MLKLQ8NB16 471 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 SLC17A8Q8NDX2 589 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 DNAJB3Q8WWF6 145 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 SPIRE2Q8WWL2 714 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 ABHD8Q96I13 439 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 SEZ6LQ9BYH1 1024 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 NAT10Q9H0A0 1025 aaKnown RBP8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 DNAJC25Q9H1X3 360 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 C2orf40Q9H1Z8 148 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 C11orf49Q9H6J7 331 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 CTNND2Q9UQB3 1225 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 PHLPP2Q6ZVD8 1323 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 ADGRA3Q8IWK6 1321 aa8.72□□□□□ -1.01
HMGA1P4-201ENST00000428643 FRMPD3Q5JV73 1810 aa8.71□□□□□ -1.01
HMGA1P4-201ENST00000428643 A0A087WZ62 844 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 DENND3A2RUS2 1198 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 INO80B-WBP1J3KQ70 363 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 EIF3DO15371 548 aaKnown RBP eCLIP8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 TLR3O15455 904 aaKnown RBP8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 B4GALT4O60513 344 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 PRPF6O94906 941 aaKnown RBP8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 RPLP2P05387 115 aaKnown RBP8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 CTSHP09668 335 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 MAPTP10636 758 aaKnown RBP8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 COL6A1P12109 1028 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 CAPN2P17655 700 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 ABCD1P33897 745 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 THPOP40225 353 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 PPP1R2P41236 205 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 GPC3P51654 580 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 EFNA5P52803 228 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 NLRP11P59045 1033 aaKnown RBP8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 MRPS6P82932 125 aaKnown RBP8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 STRN3Q13033 797 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 PAK1Q13153 545 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 PTK7Q13308 1070 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 TMEM132AQ24JP5 1023 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 KIZQ2M2Z5 673 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 TRIM60Q495X7 471 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 ZC2HC1CQ53FD0 456 aaPredicted RBP8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 HAUS6Q7Z4H7 955 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 ZNF410Q86VK4 478 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 NELFCDQ8IXH7 590 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 SYCP3Q8IZU3 236 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 ADSSL1Q8N142 457 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 SLC43A3Q8NBI5 491 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 TMEM161BQ8NDZ6 487 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 SCFD1Q8WVM8 642 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 BICD1Q96G01 975 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 PAWRQ96IZ0 340 aaKnown RBP8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 FIZ1Q96SL8 496 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 FDXACB1Q9BRP7 624 aaPredicted RBP8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 FUCA2Q9BTY2 467 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 INO80BQ9C086 356 aaPredicted RBP8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 ARHGAP28Q9P2N2 729 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 KCNG1Q9UIX4 513 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 PCDHB13Q9Y5F0 798 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 UBE4BO95155 1302 aa8.71□□□□□ -1.02
HMGA1P4-201ENST00000428643 MROH7Q68CQ1 1323 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms