RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 FAM86B2P0C5J1 330 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 DARSP14868 501 aaKnown RBP9.15□□□□□ -0.94
CSTF1-203ENST00000428552 GSPT1P15170 499 aaKnown RBP9.15□□□□□ -0.94
CSTF1-203ENST00000428552 EIF4BP23588 611 aaKnown RBP9.15□□□□□ -0.94
CSTF1-203ENST00000428552 KIF5BP33176 963 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 CA8P35219 290 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 ALDH7A1P49419 539 aaKnown RBP9.15□□□□□ -0.94
CSTF1-203ENST00000428552 CLK2P49760 499 aaKnown RBP9.15□□□□□ -0.94
CSTF1-203ENST00000428552 RSPO4Q2I0M5 234 aaPredicted RBP9.15□□□□□ -0.94
CSTF1-203ENST00000428552 LETM2Q2VYF4 491 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 WWC2Q6AWC2 1192 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 CABP7Q86V35 215 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 ABI1Q8IZP0 508 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 SLC44A3Q8N4M1 653 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 LRRC71Q8N4P6 559 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 RUBCNQ92622 972 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 TMEM169Q96HH4 297 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 KLHL5Q96PQ7 755 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 NRDE2Q9H7Z3 1164 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 TBC1D17Q9HA65 648 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 IGSF9Q9P2J2 1179 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 DNAJB4Q9UDY4 337 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 CA14Q9ULX7 337 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 U3KPZ7 1027 aaPredicted RBP9.15□□□□□ -0.94
CSTF1-203ENST00000428552 ACACBO00763 2458 aa9.15□□□□□ -0.94
CSTF1-203ENST00000428552 SH2B2O14492 632 aaPredicted RBP9.14□□□□□ -0.95
CSTF1-203ENST00000428552 ZNF862O60290 1169 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 ZC3H11AO75152 810 aaKnown RBP eCLIP9.14□□□□□ -0.95
CSTF1-203ENST00000428552 LRRN2O75325 713 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 CSDE1O75534 798 aaKnown RBP9.14□□□□□ -0.95
CSTF1-203ENST00000428552 PAPLNO95428 1278 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 CNPP09543 421 aaKnown RBP9.14□□□□□ -0.95
CSTF1-203ENST00000428552 SREBF1P36956 1147 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 SLC11A1P49279 550 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 GPC3P51654 580 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 TBC1D8BQ0IIM8 1120 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 FUT2Q10981 343 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 SART3Q15020 963 aaKnown RBP9.14□□□□□ -0.95
CSTF1-203ENST00000428552 FAM160B1Q5W0V3 765 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 PHLDB3Q6NSJ2 640 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 C15orf39Q6ZRI6 1047 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 TMTC3Q6ZXV5 915 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 NIPA1Q7RTP0 329 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 RALYLQ86SE5 291 aaKnown RBP9.14□□□□□ -0.95
CSTF1-203ENST00000428552 ZNF280BQ86YH2 543 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 POTEDQ86YR6 584 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 RAB11FIP4Q86YS3 637 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 CCDC82Q8N4S0 544 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 METTL13Q8N6R0 699 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 GPR152Q8TDT2 470 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 LPPQ93052 612 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 MYADMQ96S97 322 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 MRPL9Q9BYD2 267 aaKnown RBP9.14□□□□□ -0.95
CSTF1-203ENST00000428552 ANO3Q9BYT9 981 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 RIC8AQ9NPQ8 531 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 TBC1D13Q9NVG8 400 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 EPS15L1Q9UBC2 864 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 TPRP12270 2363 aaKnown RBP9.14□□□□□ -0.95
CSTF1-203ENST00000428552 DOCK8Q8NF50 2099 aa9.14□□□□□ -0.95
CSTF1-203ENST00000428552 CHD6Q8TD26 2715 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 CNTNAP5Q8WYK1 1306 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 USP24Q9UPU5 2620 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 EFEMP2O95967 443 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 SRFP11831 508 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 ZSCAN20P17040 1043 aaPredicted RBP9.13□□□□□ -0.95
CSTF1-203ENST00000428552 TGM1P22735 817 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 PHKA2P46019 1235 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 GNAQP50148 359 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 AFF1P51825 1210 aaKnown RBP9.13□□□□□ -0.95
CSTF1-203ENST00000428552 ATXN1P54253 815 aaKnown RBP9.13□□□□□ -0.95
CSTF1-203ENST00000428552 DRP2Q13474 957 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 GIT2Q14161 759 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 LONRF3Q496Y0 759 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 SPECC1Q5M775 1068 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 EFCAB12Q6NXP0 572 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 MIS18BP1Q6P0N0 1132 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 TRMT1LQ7Z2T5 733 aaKnown RBP9.13□□□□□ -0.95
CSTF1-203ENST00000428552 HEATR3Q7Z4Q2 680 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 C1orf210Q8IVY1 113 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 CMASQ8NFW8 434 aaPredicted RBP9.13□□□□□ -0.95
CSTF1-203ENST00000428552 ZNF707Q96C28 371 aaPredicted RBP9.13□□□□□ -0.95
CSTF1-203ENST00000428552 CEP89Q96ST8 783 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 TRAIPQ9BWF2 469 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 RHOBTB2Q9BYZ6 727 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 WDR6Q9NNW5 1121 aaKnown RBP9.13□□□□□ -0.95
CSTF1-203ENST00000428552 AKT3Q9Y243 479 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 WDR81Q562E7 1941 aa9.13□□□□□ -0.95
CSTF1-203ENST00000428552 PATJQ8NI35 1801 aa9.12□□□□□ -0.95
CSTF1-203ENST00000428552 CLUHO75153 1309 aa9.12□□□□□ -0.95
CSTF1-203ENST00000428552 ANHXE9PGG2 379 aa9.12□□□□□ -0.95
CSTF1-203ENST00000428552 IPO5O00410 1097 aaKnown RBP9.12□□□□□ -0.95
CSTF1-203ENST00000428552 MAGEB2O15479 319 aa9.12□□□□□ -0.95
CSTF1-203ENST00000428552 PRC1O43663 620 aa9.12□□□□□ -0.95
CSTF1-203ENST00000428552 EDIL3O43854 480 aa9.12□□□□□ -0.95
CSTF1-203ENST00000428552 OFD1O75665 1012 aa9.12□□□□□ -0.95
CSTF1-203ENST00000428552 DDHD2O94830 711 aa9.12□□□□□ -0.95
CSTF1-203ENST00000428552 CHMLP26374 656 aa9.12□□□□□ -0.95
CSTF1-203ENST00000428552 UGCGQ16739 394 aa9.12□□□□□ -0.95
CSTF1-203ENST00000428552 ZNF746Q6NUN9 644 aaPredicted RBP9.12□□□□□ -0.95
CSTF1-203ENST00000428552 TAS1R1Q7RTX1 841 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms