RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 ROBO3Q96MS0 1386 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 MYH13Q9UKX3 1938 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 USP17L10C9JJH3 530 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 F8W031 263 aaPredicted RBP11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 ANP32DO95626 131 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 HSPA2P54652 639 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 DRG2P55039 364 aaKnown RBP11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 ECM1Q16610 540 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 CCDC38Q502W7 563 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 DUPD1Q68J44 220 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 SLFN11Q7Z7L1 901 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 TPH2Q8IWU9 490 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 LMNTD2Q8IXW0 634 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 PPP1R9AQ9ULJ8 1098 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 ARL2BPQ9Y2Y0 163 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 TCP11X1B4DZS4 312 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 THAP12O43422 761 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 ACSL3O95573 720 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 NQO1P15559 274 aaKnown RBP11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 MMP13P45452 471 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 AP3B2Q13367 1082 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 LRRC14Q15048 493 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 BARGINQ6ZT62 677 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 FGFBP2Q9BYJ0 223 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 SEMA4AQ9H3S1 761 aa11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 DBR1Q9UK59 544 aaKnown RBP11.6□□□□□ -0.55
ATP2C1-204ENST00000428331 ECHS1P30084 290 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 PCK1P35558 622 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 GPC5P78333 572 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 ARHGAP4P98171 946 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 GIT2Q14161 759 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 HYIQ5T013 277 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 SYT2Q8N9I0 419 aaPredicted RBP11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 FAM20AQ96MK3 541 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 GPR75-ASB3A0A0A6YYF3 556 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 GNPATO15228 680 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 PPIP5K2O43314 1243 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 MED24O75448 989 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 RARGP13631 454 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 RPA1P27694 616 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 CASP4P49662 377 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 IFI35P80217 286 aaPredicted RBP11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 TRMT10CQ7L0Y3 403 aaKnown RBP11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 SLC35C1Q96A29 364 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 STAMBPL1Q96FJ0 436 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 SLC24A3Q9HC58 644 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 SFI1A8K8P3 1242 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 DIAPH2O60879 1101 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 FTLP02792 175 aaPredicted RBP11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 SHBGP04278 402 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 FMO5P49326 533 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 PLS1Q14651 629 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 TTBK2Q6IQ55 1244 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 ZNF365Q70YC5 407 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 MORC4Q8TE76 937 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 SPDL1Q96EA4 605 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 PARVGQ9HBI0 331 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 GGT7Q9UJ14 662 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 UBOX5O94941 541 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 AKR1B1P15121 316 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 RFC4P35249 363 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 RASSF2P50749 326 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 TRAF1Q13077 416 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 RIPK1Q13546 671 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 CEP128Q6ZU80 1094 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 SPATA21Q7Z572 469 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 CATSPER3Q86XQ3 398 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 INTS2Q9H0H0 1204 aaKnown RBP11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 TXLNGQ9NUQ3 528 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 FGFR1OP2Q9NVK5 253 aa11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.59□□□□□ -0.55
ATP2C1-204ENST00000428331 ADAMTSL3P82987 1691 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 ATP2B4P23634 1241 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 SSR1P43307 286 aaKnown RBP11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 IL9RQ01113 521 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 MKRN3Q13064 507 aaKnown RBP11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 PPP1R21Q6ZMI0 780 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 RBM46Q8TBY0 533 aaKnown RBP11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 WNT8AQ9H1J5 351 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 CD209Q9NNX6 404 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 SPATS2LQ9NUQ6 558 aaKnown RBP11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 TCEAL9Q9UHQ7 104 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 IGF2BP3O00425 579 aaKnown RBP eCLIP11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 CHMP2AO43633 222 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 RFX1P22670 979 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 MAN1A1P33908 653 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 SARNPP82979 210 aaKnown RBP11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 STRN3Q13033 797 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 GRAPQ13588 217 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 SGO2Q562F6 1265 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 ARMC2Q8NEN0 867 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 GDAP1Q8TB36 358 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 GRAPLQ8TC17 118 aaPredicted RBP11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 EPS8L3Q8TE67 593 aaKnown RBP11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 GRK7Q8WTQ7 553 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 AGPAT1Q99943 283 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 MKNK1Q9BUB5 465 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 AMNQ9BXJ7 453 aa11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 RTFDC1Q9BY42 306 aaPredicted RBP11.58□□□□□ -0.56
ATP2C1-204ENST00000428331 UBE2TQ9NPD8 197 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms