RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 IQCGQ9H095 443 aaKnown RBP17.33■□□□□ 0.36
C9orf3-206ENST00000428313 DDX43Q9NXZ2 648 aaKnown RBP17.33■□□□□ 0.36
C9orf3-206ENST00000428313 HAO1Q9UJM8 370 aa17.33■□□□□ 0.36
C9orf3-206ENST00000428313 MAPK13O15264 365 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 SCG2P13521 617 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 TARSP26639 723 aaKnown RBP17.32■□□□□ 0.36
C9orf3-206ENST00000428313 EPHB2P29323 1055 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 CEBPAP49715 358 aaPredicted RBP17.32■□□□□ 0.36
C9orf3-206ENST00000428313 AP1B1Q10567 949 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 GIT2Q14161 759 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 PPFIBP2Q8ND30 876 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 ESR2Q92731 530 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 OLFM3Q96PB7 478 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 PLIN2Q99541 437 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 KIAA1683Q9H0B3 1180 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 DHX36Q9H2U1 1008 aaKnown RBP17.32■□□□□ 0.36
C9orf3-206ENST00000428313 GRHL1Q9NZI5 618 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 DDAH1O94760 285 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 RPL13P26373 211 aaKnown RBP17.32■□□□□ 0.36
C9orf3-206ENST00000428313 MAPK7Q13164 816 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 SOGA3Q5TF21 947 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 LRRC74BQ6ZQY2 392 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 CEP128Q6ZU80 1094 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 CABP7Q86V35 215 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 NELFCDQ8IXH7 590 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 LRRC37BQ96QE4 947 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 TSG101Q99816 390 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 TMEM165Q9HC07 324 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 LNPEPQ9UIQ6 1025 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 INTUQ9ULD6 942 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 STARD13Q9Y3M8 1113 aa17.32■□□□□ 0.36
C9orf3-206ENST00000428313 PVALEFA0A1B0GWK0 134 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 PTPN4P29074 926 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 STX2P32856 288 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 SLC34A1Q06495 639 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 LIN52Q52LA3 116 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 C4orf50Q6ZRC1 276 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 ARHGEF18Q6ZSZ5 1173 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 FAM133AQ8N9E0 248 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 SMC1BQ8NDV3 1235 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 RIC8AQ9NPQ8 531 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 CHKBQ9Y259 395 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 TBC1D30Q9Y2I9 924 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 SNX24Q9Y343 169 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 USP46P62068 366 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 STRN3Q13033 797 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 ENAHQ8N8S7 591 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-206ENST00000428313 NRG4Q8WWG1 115 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 HIC2Q96JB3 615 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 ARMT1Q9H993 441 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 AMFRQ9UKV5 643 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 NENFQ9UMX5 172 aa17.31■□□□□ 0.36
C9orf3-206ENST00000428313 CYP1A1P04798 512 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-206ENST00000428313 LYNP07948 512 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 UQCRFS1P1P0C7P4 283 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 T-ENOLP0DO92 83 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 MAGEA10P43363 369 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-206ENST00000428313 TROAPQ12815 778 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 PFKFB3Q16875 520 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-206ENST00000428313 KHDC1Q4VXA5 237 aaKnown RBP17.3■□□□□ 0.36
C9orf3-206ENST00000428313 TRMT10CQ7L0Y3 403 aaKnown RBP17.3■□□□□ 0.36
C9orf3-206ENST00000428313 ZSCAN10Q96SZ4 725 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-206ENST00000428313 PITPNM3Q9BZ71 974 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 TCP11L1Q9NUJ3 509 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 ABCF2Q9UG63 623 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 NAGPAQ9UK23 515 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 COL4A3BPQ9Y5P4 624 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 PODXLO00592 558 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 MAP3K7O43318 606 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 PFDN1O60925 122 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 GNA14O95837 355 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 BPIFB4P59827 614 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 MAP7Q14244 749 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 UNC13DQ70J99 1090 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 RNF168Q8IYW5 571 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-206ENST00000428313 BLIDQ8IZY5 108 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 TTC5Q8N0Z6 440 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 ANKRD42Q8N9B4 389 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 GDAP1Q8TB36 358 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 ZNF184Q99676 751 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-206ENST00000428313 GANQ9H2C0 597 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 TMEM60Q9H2L4 133 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 PASKQ96RG2 1323 aa17.3■□□□□ 0.36
C9orf3-206ENST00000428313 MYH3P11055 1940 aa17.29■□□□□ 0.36
C9orf3-206ENST00000428313 WNK3Q9BYP7 1800 aa17.29■□□□□ 0.36
C9orf3-206ENST00000428313 PLCH1Q4KWH8 1693 aa17.29■□□□□ 0.36
C9orf3-206ENST00000428313 HGSO14964 777 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-206ENST00000428313 ASLP04424 464 aa17.29■□□□□ 0.36
C9orf3-206ENST00000428313 TAC1P20366 129 aa17.29■□□□□ 0.36
C9orf3-206ENST00000428313 FGFR4P22455 802 aa17.29■□□□□ 0.36
C9orf3-206ENST00000428313 CDK7P50613 346 aa17.29■□□□□ 0.36
C9orf3-206ENST00000428313 PTK2Q05397 1052 aa17.29■□□□□ 0.36
C9orf3-206ENST00000428313 RCN1Q15293 331 aa17.29■□□□□ 0.36
C9orf3-206ENST00000428313 ZNF568Q3ZCX4 644 aa17.29■□□□□ 0.36
C9orf3-206ENST00000428313 IFIT1BQ5T764 474 aaKnown RBP17.29■□□□□ 0.36
C9orf3-206ENST00000428313 PPP1R21Q6ZMI0 780 aa17.29■□□□□ 0.36
C9orf3-206ENST00000428313 PROSER2Q86WR7 435 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-206ENST00000428313 SRBD1Q8N5C6 995 aaKnown RBP17.29■□□□□ 0.36
C9orf3-206ENST00000428313 KCNK9Q9NPC2 374 aa17.29■□□□□ 0.36
C9orf3-206ENST00000428313 ZNF212Q9UDV6 495 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms