RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 MIS18BP1Q6P0N0 1132 aa11.68□□□□□ -0.54
RDH11-202ENST00000428130 ZC3H14Q6PJT7 736 aaKnown RBP11.68□□□□□ -0.54
RDH11-202ENST00000428130 C15orf39Q6ZRI6 1047 aa11.68□□□□□ -0.54
RDH11-202ENST00000428130 NIPA1Q7RTP0 329 aa11.68□□□□□ -0.54
RDH11-202ENST00000428130 HEATR3Q7Z4Q2 680 aa11.68□□□□□ -0.54
RDH11-202ENST00000428130 CKAP2LQ8IYA6 745 aa11.68□□□□□ -0.54
RDH11-202ENST00000428130 CCDC82Q8N4S0 544 aa11.68□□□□□ -0.54
RDH11-202ENST00000428130 RSAD2Q8WXG1 361 aa11.68□□□□□ -0.54
RDH11-202ENST00000428130 VN1R3Q9BXE9 311 aa11.68□□□□□ -0.54
RDH11-202ENST00000428130 TBC1D17Q9HA65 648 aa11.68□□□□□ -0.54
RDH11-202ENST00000428130 DLGAP2Q9P1A6 1054 aa11.68□□□□□ -0.54
RDH11-202ENST00000428130 AKT3Q9Y243 479 aa11.68□□□□□ -0.54
RDH11-202ENST00000428130 MAP1BP46821 2468 aaKnown RBP11.68□□□□□ -0.54
RDH11-202ENST00000428130 TDRD15B5MCY1 1934 aaKnown RBP11.68□□□□□ -0.54
RDH11-202ENST00000428130 CHD6Q8TD26 2715 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 DOCK6Q96HP0 2047 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 SH2B2O14492 632 aaPredicted RBP11.67□□□□□ -0.54
RDH11-202ENST00000428130 MAGEB2O15479 319 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 FOSP01100 380 aaPredicted RBP11.67□□□□□ -0.54
RDH11-202ENST00000428130 SP9P0CG40 484 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 FGFR4P22455 802 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 SREBF1P36956 1147 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 GPC3P51654 580 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 WWC2Q6AWC2 1192 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 EFCAB12Q6NXP0 572 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 TMTC3Q6ZXV5 915 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 TRMT1LQ7Z2T5 733 aaKnown RBP11.67□□□□□ -0.54
RDH11-202ENST00000428130 LRRC71Q8N4P6 559 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 ZNF668Q96K58 619 aaPredicted RBP11.67□□□□□ -0.54
RDH11-202ENST00000428130 KLHL5Q96PQ7 755 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 MAP7D2Q96T17 732 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 MTA3Q9BTC8 594 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 NRDE2Q9H7Z3 1164 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 RIC8AQ9NPQ8 531 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 DACT1Q9NYF0 836 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 CA14Q9ULX7 337 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 CEP131Q9UPN4 1083 aa11.67□□□□□ -0.54
RDH11-202ENST00000428130 COL4A3Q01955 1670 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 CHD8Q9HCK8 2581 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 IGLV3-22A0A075B6J6 115 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 CARNS1A5YM72 827 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 CCDC69A6NI79 296 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 SPDYE4A6NLX3 237 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 FAM86B1E9PN63 330 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 PRC1O43663 620 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 DCNP07585 359 aaKnown RBP11.66□□□□□ -0.54
RDH11-202ENST00000428130 GALTP07902 379 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 FAM86B2P0C5J1 330 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 CALM1P0DP23 149 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 CALM2P0DP24 149 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 CALM3P0DP25 149 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 SRFP11831 508 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 DARSP14868 501 aaKnown RBP11.66□□□□□ -0.54
RDH11-202ENST00000428130 RFX1P22670 979 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 PHKA2P46019 1235 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 RSPO4Q2I0M5 234 aaPredicted RBP11.66□□□□□ -0.54
RDH11-202ENST00000428130 SPECC1Q5M775 1068 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 PHLDB3Q6NSJ2 640 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 CASC1Q6TDU7 716 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 NFXL1Q6ZNB6 911 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 RAB11FIP4Q86YS3 637 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 TEX2Q8IWB9 1127 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 ZNF710Q8N1W2 664 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 SUMF1Q8NBK3 374 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 CMASQ8NFW8 434 aaPredicted RBP11.66□□□□□ -0.54
RDH11-202ENST00000428130 RSPH1Q8WYR4 309 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 LPPQ93052 612 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 TBC1D13Q9NVG8 400 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 DNAJB4Q9UDY4 337 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 USP24Q9UPU5 2620 aa11.66□□□□□ -0.54
RDH11-202ENST00000428130 GPR179Q6PRD1 2367 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 CNTNAP5Q8WYK1 1306 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 POTEMA6NI47 508 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 MEIS3P2A8K0S8 358 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 IPO5O00410 1097 aaKnown RBP11.65□□□□□ -0.54
RDH11-202ENST00000428130 B4GALT3O60512 393 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 LILRB3O75022 631 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 CNPP09543 421 aaKnown RBP11.65□□□□□ -0.54
RDH11-202ENST00000428130 GSPT1P15170 499 aaKnown RBP11.65□□□□□ -0.54
RDH11-202ENST00000428130 KLRC2P26717 231 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 TMOD1P28289 359 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 GBP2P32456 591 aaPredicted RBP11.65□□□□□ -0.54
RDH11-202ENST00000428130 ZNF76P36508 570 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 LIFRP42702 1097 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 SLC11A1P49279 550 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 CLK2P49760 499 aaKnown RBP11.65□□□□□ -0.54
RDH11-202ENST00000428130 NAPAP54920 295 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 AP3B2Q13367 1082 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 COL9A3Q14050 684 aaPredicted RBP11.65□□□□□ -0.54
RDH11-202ENST00000428130 NONOQ15233 471 aaKnown RBP eCLIP11.65□□□□□ -0.54
RDH11-202ENST00000428130 ZNF746Q6NUN9 644 aaPredicted RBP11.65□□□□□ -0.54
RDH11-202ENST00000428130 PPP1R18Q6NYC8 613 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 POTEGQ6S5H5 508 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 PLA2G4DQ86XP0 818 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 C1orf210Q8IVY1 113 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 SMAP1Q8IYB5 467 aaPredicted RBP11.65□□□□□ -0.54
RDH11-202ENST00000428130 TMTC2Q8N394 836 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 SLC44A3Q8N4M1 653 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 GPR152Q8TDT2 470 aa11.65□□□□□ -0.54
RDH11-202ENST00000428130 CRYGNQ8WXF5 182 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms