RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 GPRC5CQ9NQ84 441 aa27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 PCDHA11Q9Y5I1 949 aa27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 ATP6V1DQ9Y5K8 247 aa27.91■■■□□ 2.06
HERPUD2-205ENST00000427455 ENPP3O14638 875 aa27.9■■■□□ 2.06
HERPUD2-205ENST00000427455 GLRA2P23416 452 aa27.9■■■□□ 2.06
HERPUD2-205ENST00000427455 ANP32AP39687 249 aaKnown RBP27.9■■■□□ 2.06
HERPUD2-205ENST00000427455 PBX2P40425 430 aa27.9■■■□□ 2.06
HERPUD2-205ENST00000427455 PHKA2P46019 1235 aa27.9■■■□□ 2.06
HERPUD2-205ENST00000427455 RABGGTBP53611 331 aa27.9■■■□□ 2.06
HERPUD2-205ENST00000427455 CAPSQ13938 189 aa27.9■■■□□ 2.06
HERPUD2-205ENST00000427455 MSRAQ9UJ68 235 aa27.9■■■□□ 2.06
HERPUD2-205ENST00000427455 GJB5O95377 273 aa27.89■■■□□ 2.06
HERPUD2-205ENST00000427455 PLCG1P19174 1290 aa27.89■■■□□ 2.06
HERPUD2-205ENST00000427455 POU5F1BQ06416 359 aa27.89■■■□□ 2.06
HERPUD2-205ENST00000427455 USP49Q70CQ1 688 aa27.89■■■□□ 2.06
HERPUD2-205ENST00000427455 SRGAP1Q7Z6B7 1085 aa27.89■■■□□ 2.06
HERPUD2-205ENST00000427455 TMCO2Q7Z6W1 182 aaPredicted RBP27.89■■■□□ 2.06
HERPUD2-205ENST00000427455 DENND3A2RUS2 1198 aa27.88■■■□□ 2.05
HERPUD2-205ENST00000427455 CSDE1O75534 798 aaKnown RBP27.88■■■□□ 2.05
HERPUD2-205ENST00000427455 SSBP05455 408 aaKnown RBP eCLIP27.88■■■□□ 2.05
HERPUD2-205ENST00000427455 PLA2G4BP0C869 781 aa27.88■■■□□ 2.05
HERPUD2-205ENST00000427455 FGFR4P22455 802 aa27.88■■■□□ 2.05
HERPUD2-205ENST00000427455 DDIT3P35638 169 aa27.88■■■□□ 2.05
HERPUD2-205ENST00000427455 NUCB2P80303 420 aa27.88■■■□□ 2.05
HERPUD2-205ENST00000427455 SYT2Q8N9I0 419 aaPredicted RBP27.88■■■□□ 2.05
HERPUD2-205ENST00000427455 KIFAP3Q92845 792 aa27.88■■■□□ 2.05
HERPUD2-205ENST00000427455 TOP1MTQ969P6 601 aa27.88■■■□□ 2.05
HERPUD2-205ENST00000427455 TIFAQ96CG3 184 aa27.88■■■□□ 2.05
HERPUD2-205ENST00000427455 ZBED2Q9BTP6 218 aa27.88■■■□□ 2.05
HERPUD2-205ENST00000427455 RUSC1Q9BVN2 902 aa27.88■■■□□ 2.05
HERPUD2-205ENST00000427455 NFKBIZQ9BYH8 718 aa27.88■■■□□ 2.05
HERPUD2-205ENST00000427455 CCDC39Q9UFE4 941 aa27.88■■■□□ 2.05
HERPUD2-205ENST00000427455 TMEM265A0A087WTH1 108 aa27.87■■■□□ 2.05
HERPUD2-205ENST00000427455 TLL1O43897 1013 aa27.87■■■□□ 2.05
HERPUD2-205ENST00000427455 MGEA5O60502 916 aa27.87■■■□□ 2.05
HERPUD2-205ENST00000427455 SLC12A3P55017 1021 aa27.87■■■□□ 2.05
HERPUD2-205ENST00000427455 PTENP60484 403 aa27.87■■■□□ 2.05
HERPUD2-205ENST00000427455 KRT85P78386 507 aa27.87■■■□□ 2.05
HERPUD2-205ENST00000427455 RINT1Q6NUQ1 792 aa27.87■■■□□ 2.05
HERPUD2-205ENST00000427455 RTN4RL1Q86UN2 441 aaPredicted RBP27.87■■■□□ 2.05
HERPUD2-205ENST00000427455 IFNLR1Q8IU57 520 aaPredicted RBP27.87■■■□□ 2.05
HERPUD2-205ENST00000427455 ADAM2Q99965 735 aa27.87■■■□□ 2.05
HERPUD2-205ENST00000427455 RGS18Q9NS28 235 aa27.87■■■□□ 2.05
HERPUD2-205ENST00000427455 C1orf112Q9NSG2 853 aa27.87■■■□□ 2.05
HERPUD2-205ENST00000427455 KCND2Q9NZV8 630 aa27.87■■■□□ 2.05
HERPUD2-205ENST00000427455 YBX2Q9Y2T7 364 aaKnown RBP27.87■■■□□ 2.05
HERPUD2-205ENST00000427455 TTC3P53804 2025 aa27.86■■■□□ 2.05
HERPUD2-205ENST00000427455 CUTAO60888 179 aa27.86■■■□□ 2.05
HERPUD2-205ENST00000427455 DSC3Q14574 896 aa27.86■■■□□ 2.05
HERPUD2-205ENST00000427455 FAM117BQ6P1L5 589 aa27.86■■■□□ 2.05
HERPUD2-205ENST00000427455 C1orf186Q6ZWK4 172 aa27.86■■■□□ 2.05
HERPUD2-205ENST00000427455 CATSPER4Q7RTX7 472 aa27.86■■■□□ 2.05
HERPUD2-205ENST00000427455 LRRC15Q8TF66 581 aa27.86■■■□□ 2.05
HERPUD2-205ENST00000427455 TIPINQ9BVW5 301 aa27.86■■■□□ 2.05
HERPUD2-205ENST00000427455 MINDY3Q9H8M7 445 aa27.86■■■□□ 2.05
HERPUD2-205ENST00000427455 BLOC1S4Q9NUP1 217 aa27.86■■■□□ 2.05
HERPUD2-205ENST00000427455 ZSCAN20P17040 1043 aaPredicted RBP27.85■■■□□ 2.05
HERPUD2-205ENST00000427455 GUCY2CP25092 1073 aa27.85■■■□□ 2.05
HERPUD2-205ENST00000427455 PPP2R5AQ15172 486 aa27.85■■■□□ 2.05
HERPUD2-205ENST00000427455 PCBP1Q15365 356 aaKnown RBP eCLIP27.85■■■□□ 2.05
HERPUD2-205ENST00000427455 RAD54LQ92698 747 aa27.85■■■□□ 2.05
HERPUD2-205ENST00000427455 RAD9AQ99638 391 aa27.85■■■□□ 2.05
HERPUD2-205ENST00000427455 CHST12Q9NRB3 414 aa27.85■■■□□ 2.05
HERPUD2-205ENST00000427455 STK17AQ9UEE5 414 aa27.85■■■□□ 2.05
HERPUD2-205ENST00000427455 RCOR1Q9UKL0 485 aa27.85■■■□□ 2.05
HERPUD2-205ENST00000427455 LRRIQ4A6NIV6 560 aa27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 UPP2O95045 317 aa27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 MYOGP15173 224 aa27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 NCLP19338 710 aaKnown RBP27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 NAMPTP43490 491 aa27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 ME1P48163 572 aa27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 ZNF697Q5TEC3 545 aa27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 CDCA2Q69YH5 1023 aaPredicted RBP27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 SLC24A5Q71RS6 500 aa27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 NPAS4Q8IUM7 802 aa27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 BSNDQ8WZ55 320 aa27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 LARP4BQ92615 738 aaKnown RBP27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 IFT74Q96LB3 600 aa27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 DRC1Q96MC2 740 aa27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 NKX2-4Q9H2Z4 354 aa27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 RNF216Q9NWF9 866 aaPredicted RBP27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 COL4A6Q14031 1691 aa27.84■■■□□ 2.05
HERPUD2-205ENST00000427455 HIP1RO75146 1068 aa27.83■■■□□ 2.05
HERPUD2-205ENST00000427455 CA3P07451 260 aa27.83■■■□□ 2.05
HERPUD2-205ENST00000427455 SARSP49591 514 aaKnown RBP27.83■■■□□ 2.05
HERPUD2-205ENST00000427455 HTRA4P83105 476 aaPredicted RBP27.83■■■□□ 2.05
HERPUD2-205ENST00000427455 MBTD1Q05BQ5 628 aa27.83■■■□□ 2.05
HERPUD2-205ENST00000427455 AGPAT5Q9NUQ2 364 aa27.83■■■□□ 2.05
HERPUD2-205ENST00000427455 DACT1Q9NYF0 836 aa27.83■■■□□ 2.05
HERPUD2-205ENST00000427455 PIN4Q9Y237 131 aaKnown RBP27.83■■■□□ 2.05
HERPUD2-205ENST00000427455 INSL6Q9Y581 213 aa27.83■■■□□ 2.05
HERPUD2-205ENST00000427455 CHD9Q3L8U1 2897 aa27.83■■■□□ 2.05
HERPUD2-205ENST00000427455 C9IYK1 514 aa27.82■■■□□ 2.04
HERPUD2-205ENST00000427455 INO80B-WBP1J3KQ70 363 aa27.82■■■□□ 2.04
HERPUD2-205ENST00000427455 ERLIN2O94905 339 aa27.82■■■□□ 2.04
HERPUD2-205ENST00000427455 STAG3L1P0CL83 205 aa27.82■■■□□ 2.04
HERPUD2-205ENST00000427455 AXDND1Q5T1B0 1012 aaPredicted RBP27.82■■■□□ 2.04
HERPUD2-205ENST00000427455 RRAGBQ5VZM2 374 aa27.82■■■□□ 2.04
HERPUD2-205ENST00000427455 CCDC73Q6ZRK6 1079 aa27.82■■■□□ 2.04
HERPUD2-205ENST00000427455 GPBP1Q86WP2 473 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms