RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 REV3LO60673 3130 aa12.02□□□□□ -0.49
LINC01238-202ENST00000426962 SPTBN5Q9NRC6 3674 aaKnown RBP12.01□□□□□ -0.49
LINC01238-202ENST00000426962 POTEMA6NI47 508 aa12.01□□□□□ -0.49
LINC01238-202ENST00000426962 SRGAP2CP0DJJ0 459 aa12.01□□□□□ -0.49
LINC01238-202ENST00000426962 FGFR1P11362 822 aa12.01□□□□□ -0.49
LINC01238-202ENST00000426962 TECP42680 631 aa12.01□□□□□ -0.49
LINC01238-202ENST00000426962 LAMTOR4Q0VGL1 99 aa12.01□□□□□ -0.49
LINC01238-202ENST00000426962 TTC38Q5R3I4 469 aa12.01□□□□□ -0.49
LINC01238-202ENST00000426962 SPOUT1Q5T280 376 aaKnown RBP12.01□□□□□ -0.49
LINC01238-202ENST00000426962 SRGAP1Q7Z6B7 1085 aa12.01□□□□□ -0.49
LINC01238-202ENST00000426962 KLHL23Q8NBE8 558 aa12.01□□□□□ -0.49
LINC01238-202ENST00000426962 SPPL3Q8TCT6 385 aa12.01□□□□□ -0.49
LINC01238-202ENST00000426962 MTRQ99707 1265 aa12.01□□□□□ -0.49
LINC01238-202ENST00000426962 TRAIPQ9BWF2 469 aa12.01□□□□□ -0.49
LINC01238-202ENST00000426962 TMEM117Q9H0C3 514 aa12.01□□□□□ -0.49
LINC01238-202ENST00000426962 NSUN3Q9H649 340 aaKnown RBP12.01□□□□□ -0.49
LINC01238-202ENST00000426962 TUFT1Q9NNX1 390 aa12.01□□□□□ -0.49
LINC01238-202ENST00000426962 ALG13Q9NP73 1137 aaKnown RBP12.01□□□□□ -0.49
LINC01238-202ENST00000426962 TYW1Q9NV66 732 aaKnown RBP12.01□□□□□ -0.49
LINC01238-202ENST00000426962 PCDHB12Q9Y5F1 795 aa12.01□□□□□ -0.49
LINC01238-202ENST00000426962 NCK2O43639 380 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 DGAT1O75907 488 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 CD2BP2O95400 341 aaKnown RBP12□□□□□ -0.49
LINC01238-202ENST00000426962 ITGB1P05556 798 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 OR52Z1P0C646 297 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 SPATA31C1P0DKV0 1188 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 SKIP12755 728 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 MXD4Q14582 209 aaPredicted RBP12□□□□□ -0.49
LINC01238-202ENST00000426962 EMC2Q15006 297 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 TCEAL5Q5H9L2 206 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 CATSPER4Q7RTX7 472 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 FERMT3Q86UX7 667 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 CATSPER3Q86XQ3 398 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 ABI1Q8IZP0 508 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 C4orf32Q8N8J7 132 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 ADAMTS19Q8TE59 1207 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 PIGOQ8TEQ8 1089 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 CASD1Q96PB1 797 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 POLR3CQ9BUI4 534 aaPredicted RBP12□□□□□ -0.49
LINC01238-202ENST00000426962 UBE2ZQ9H832 354 aaPredicted RBP12□□□□□ -0.49
LINC01238-202ENST00000426962 BMP2KQ9NSY1 1161 aaPredicted RBP12□□□□□ -0.49
LINC01238-202ENST00000426962 XIRP2A4UGR9 3374 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 VCANP13611 3396 aa12□□□□□ -0.49
LINC01238-202ENST00000426962 RPA1P27694 616 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 PHKA2P46019 1235 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 RARRES1P49788 294 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 TOB1P50616 345 aaPredicted RBP11.99□□□□□ -0.49
LINC01238-202ENST00000426962 KCNQ1P51787 676 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 POU5F1BQ06416 359 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 CAMK1Q14012 370 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 PDIA5Q14554 519 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 CSPP1Q1MSJ5 1256 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 TWF2Q6IBS0 349 aaKnown RBP11.99□□□□□ -0.49
LINC01238-202ENST00000426962 LRRC55Q6ZSA7 311 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 ZNF598Q86UK7 904 aaKnown RBP11.99□□□□□ -0.49
LINC01238-202ENST00000426962 RNF149Q8NC42 400 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 RNF169Q8NCN4 708 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 ERMNQ8TAM6 284 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 POF1BQ8WVV4 589 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 CCDC43Q96MW1 224 aaKnown RBP11.99□□□□□ -0.49
LINC01238-202ENST00000426962 NACC1Q96RE7 527 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 CWH43Q9H720 699 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 XPNPEP1Q9NQW7 623 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 RNF19AQ9NV58 838 aa11.99□□□□□ -0.49
LINC01238-202ENST00000426962 PIN4Q9Y237 131 aaKnown RBP11.99□□□□□ -0.49
LINC01238-202ENST00000426962 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.99□□□□□ -0.49
LINC01238-202ENST00000426962 RALGAPA2Q2PPJ7 1873 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 COL4A4P53420 1690 aaPredicted RBP11.98□□□□□ -0.49
LINC01238-202ENST00000426962 A0A087WWV3 80 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 ZNF623O75123 536 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 MED24O75448 989 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 LAG3P18627 525 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 MUTP22033 750 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 DNAJB1P25685 340 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 GJB2P29033 226 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 ARL2P36404 184 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 FXR2P51116 673 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC01238-202ENST00000426962 PTENP60484 403 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 UBE3AQ05086 875 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 PTGDRQ13258 359 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 TFDP1Q14186 410 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 NBR1Q14596 966 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 COL19A1Q14993 1142 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 PCBP1Q15365 356 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC01238-202ENST00000426962 LEXMQ3ZCV2 418 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 MCTP1Q6DN14 999 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 COLGALT1Q8NBJ5 622 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 RSPH1Q8WYR4 309 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 PABPC5Q96DU9 382 aaKnown RBP11.98□□□□□ -0.49
LINC01238-202ENST00000426962 UHRF1Q96T88 793 aaPredicted RBP11.98□□□□□ -0.49
LINC01238-202ENST00000426962 MINDY3Q9H8M7 445 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 AGPAT5Q9NUQ2 364 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 FAM105AQ9NUU6 356 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 DBR1Q9UK59 544 aaKnown RBP11.98□□□□□ -0.49
LINC01238-202ENST00000426962 PCDHB6Q9Y5E3 794 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 STK24Q9Y6E0 443 aa11.98□□□□□ -0.49
LINC01238-202ENST00000426962 H3BQV1 296 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 TNFRSF10AO00220 468 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 LAD1O00515 517 aa11.97□□□□□ -0.49
LINC01238-202ENST00000426962 FGF18O76093 207 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms