RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 E9PMD0 336 aa17.26■□□□□ 0.35
PKP4-205ENST00000426248 RTN2O75298 545 aa17.26■□□□□ 0.35
PKP4-205ENST00000426248 VGLL4Q14135 290 aa17.26■□□□□ 0.35
PKP4-205ENST00000426248 FAM228AQ86W67 206 aa17.26■□□□□ 0.35
PKP4-205ENST00000426248 UHMK1Q8TAS1 419 aaKnown RBP17.26■□□□□ 0.35
PKP4-205ENST00000426248 GSDMAQ96QA5 445 aa17.26■□□□□ 0.35
PKP4-205ENST00000426248 RRAGCQ9HB90 399 aa17.26■□□□□ 0.35
PKP4-205ENST00000426248 PRPHP41219 470 aa17.26■□□□□ 0.35
PKP4-205ENST00000426248 SPRED3Q2MJR0 410 aa17.26■□□□□ 0.35
PKP4-205ENST00000426248 TRIM74Q86UV6 250 aa17.26■□□□□ 0.35
PKP4-205ENST00000426248 TRIM73Q86UV7 250 aa17.26■□□□□ 0.35
PKP4-205ENST00000426248 CSGALNACT2Q8N6G5 542 aa17.26■□□□□ 0.35
PKP4-205ENST00000426248 C2orf69Q8N8R5 385 aa17.26■□□□□ 0.35
PKP4-205ENST00000426248 MGARPQ8TDB4 240 aa17.26■□□□□ 0.35
PKP4-205ENST00000426248 MPHOSPH6Q99547 160 aaKnown RBP17.26■□□□□ 0.35
PKP4-205ENST00000426248 HPSEQ9Y251 543 aa17.26■□□□□ 0.35
PKP4-205ENST00000426248 ZNF233A6NK53 670 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 TCP1P17987 556 aaKnown RBP17.25■□□□□ 0.35
PKP4-205ENST00000426248 USP11P51784 963 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 HIRAP54198 1017 aaPredicted RBP17.25■□□□□ 0.35
PKP4-205ENST00000426248 CNNM4Q6P4Q7 775 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 CACNA2D4Q7Z3S7 1137 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 HOMEZQ8IX15 550 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 PRCCQ92733 491 aaPredicted RBP17.25■□□□□ 0.35
PKP4-205ENST00000426248 SUDS3Q9H7L9 328 aaPredicted RBP17.25■□□□□ 0.35
PKP4-205ENST00000426248 POTEFA5A3E0 1075 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 TRAF5O00463 557 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 POTEIP0CG38 1075 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 CD44P16070 742 aaKnown RBP17.25■□□□□ 0.35
PKP4-205ENST00000426248 RPS6P62753 249 aaKnown RBP17.25■□□□□ 0.35
PKP4-205ENST00000426248 KCTD2Q14681 263 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 POTEGQ6S5H5 508 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 POTEEQ6S8J3 1075 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 MDM1Q8TC05 714 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 AGAP11Q8TF27 550 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 KIAA1755Q5JYT7 1200 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 RBM46Q8TBY0 533 aaKnown RBP17.25■□□□□ 0.35
PKP4-205ENST00000426248 CLMNQ96JQ2 1002 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 TMEM165Q9HC07 324 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 RGL1Q9NZL6 768 aa17.25■□□□□ 0.35
PKP4-205ENST00000426248 KDM3AQ9Y4C1 1321 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 LONP2Q86WA8 852 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 SH2D3AQ9BRG2 576 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 TEX13BQ9BXU2 312 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 BHMT2Q9H2M3 363 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 CHCHD3Q9NX63 227 aaKnown RBP17.24■□□□□ 0.35
PKP4-205ENST00000426248 SNX12Q9UMY4 172 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 ATRNL1Q5VV63 1379 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 B4DLN1 442 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 H0Y3Z8 333 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 MAGEA1P43355 309 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 NPY5RQ15761 445 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 CEP55Q53EZ4 464 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 KSR1Q8IVT5 923 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 TEKT4Q8WW24 435 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 CDCA5Q96FF9 252 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 PPP1R9AQ9ULJ8 1098 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 hCG_2014768A0A024R1R8 64 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 CCDC6Q16204 474 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 PAPD7Q5XG87 772 aaKnown RBP17.24■□□□□ 0.35
PKP4-205ENST00000426248 MYCT1Q8N699 235 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 TSGA10Q9BZW7 698 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.24■□□□□ 0.352e-7■■■□□ 15.4
PKP4-205ENST00000426248 LTBP3Q9NS15 1303 aa17.24■□□□□ 0.35
PKP4-205ENST00000426248 OSBPP22059 807 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 HERVK_113P62684 666 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 MTMR1Q13613 665 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 HPS3Q969F9 1004 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 FAM207AQ9NSI2 230 aaPredicted RBP17.23■□□□□ 0.35
PKP4-205ENST00000426248 IPO5O00410 1097 aaKnown RBP17.23■□□□□ 0.35
PKP4-205ENST00000426248 CELF2O95319 508 aaKnown RBP17.23■□□□□ 0.35
PKP4-205ENST00000426248 ICAM1P05362 532 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 DBN1Q16643 649 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 KLRG1Q96E93 195 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 ZFATQ9P243 1243 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 SFI1A8K8P3 1242 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 HHATQ5VTY9 493 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 ILDR2Q71H61 639 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 LBHD1Q9BQE6 289 aaPredicted RBP17.23■□□□□ 0.35
PKP4-205ENST00000426248 RABGAP1Q9Y3P9 1069 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 ZC3H4Q9UPT8 1303 aaKnown RBP17.23■□□□□ 0.35
PKP4-205ENST00000426248 TTC36A6NLP5 189 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 MIS18BP1Q6P0N0 1132 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 CCHCR1Q8TD31 782 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 FAM210AQ96ND0 272 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 TAAR1Q96RJ0 339 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 PANK4Q9NVE7 773 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 USH1CQ9Y6N9 552 aa17.23■□□□□ 0.35
PKP4-205ENST00000426248 FTCDO95954 541 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 PLA2G4BP0C869 781 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 PRELPP51888 382 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 LRRC45Q96CN5 670 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 HOMER3Q9NSC5 361 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 EMILIN3Q9NT22 766 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 A0A087X0B3 334 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 TRIM49BA6NDI0 452 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 RASSF10A6NK89 507 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 NOP56O00567 594 aaKnown RBP17.22■□□□□ 0.35
PKP4-205ENST00000426248 RAB27AP51159 221 aa17.22■□□□□ 0.35
PKP4-205ENST00000426248 TNNC1P63316 161 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms