RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 CASD1Q96PB1 797 aa24.08■■□□□ 1.44
CDCP1-202ENST00000425231 INO80BQ9C086 356 aaPredicted RBP24.08■■□□□ 1.44
CDCP1-202ENST00000425231 FOXP1Q9H334 677 aaPredicted RBP24.08■■□□□ 1.44
CDCP1-202ENST00000425231 CWH43Q9H720 699 aa24.08■■□□□ 1.44
CDCP1-202ENST00000425231 IFT122Q9HBG6 1241 aa24.08■■□□□ 1.44
CDCP1-202ENST00000425231 CHST12Q9NRB3 414 aa24.08■■□□□ 1.44
CDCP1-202ENST00000425231 LYPLA2O95372 231 aa24.07■■□□□ 1.44
CDCP1-202ENST00000425231 XKR9Q5GH70 373 aa24.07■■□□□ 1.44
CDCP1-202ENST00000425231 ZNF598Q86UK7 904 aaKnown RBP24.07■■□□□ 1.44
CDCP1-202ENST00000425231 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.07■■□□□ 1.44
CDCP1-202ENST00000425231 NEK9Q8TD19 979 aa24.07■■□□□ 1.44
CDCP1-202ENST00000425231 PRPF31Q8WWY3 499 aaKnown RBP24.07■■□□□ 1.44
CDCP1-202ENST00000425231 TMEM143Q96AN5 459 aa24.07■■□□□ 1.44
CDCP1-202ENST00000425231 NLRP4Q96MN2 994 aa24.07■■□□□ 1.44
CDCP1-202ENST00000425231 TMEM117Q9H0C3 514 aa24.07■■□□□ 1.44
CDCP1-202ENST00000425231 COL4A3BPQ9Y5P4 624 aa24.07■■□□□ 1.44
CDCP1-202ENST00000425231 PLXNA4Q9HCM2 1894 aa24.06■■□□□ 1.44
CDCP1-202ENST00000425231 ARID2Q68CP9 1835 aa24.06■■□□□ 1.44
CDCP1-202ENST00000425231 ATF7P17544 494 aaPredicted RBP24.06■■□□□ 1.44
CDCP1-202ENST00000425231 ATP2B1P20020 1258 aa24.06■■□□□ 1.44
CDCP1-202ENST00000425231 SFPQP23246 707 aaKnown RBP eCLIP24.06■■□□□ 1.44
CDCP1-202ENST00000425231 MCM7P33993 719 aa24.06■■□□□ 1.44
CDCP1-202ENST00000425231 LRRC55Q6ZSA7 311 aa24.06■■□□□ 1.44
CDCP1-202ENST00000425231 POF1BQ8WVV4 589 aa24.06■■□□□ 1.44
CDCP1-202ENST00000425231 TRAIPQ9BWF2 469 aa24.06■■□□□ 1.44
CDCP1-202ENST00000425231 DACT1Q9NYF0 836 aa24.06■■□□□ 1.44
CDCP1-202ENST00000425231 PCDHB12Q9Y5F1 795 aa24.06■■□□□ 1.44
CDCP1-202ENST00000425231 HOXA2O43364 376 aa24.05■■□□□ 1.44
CDCP1-202ENST00000425231 EOMESO95936 686 aa24.05■■□□□ 1.44
CDCP1-202ENST00000425231 HYAL1Q12794 435 aa24.05■■□□□ 1.44
CDCP1-202ENST00000425231 RABEP1Q15276 862 aa24.05■■□□□ 1.44
CDCP1-202ENST00000425231 CTC1Q2NKJ3 1217 aa24.05■■□□□ 1.44
CDCP1-202ENST00000425231 SPOUT1Q5T280 376 aaKnown RBP24.05■■□□□ 1.44
CDCP1-202ENST00000425231 FAM184AQ8NB25 1140 aa24.05■■□□□ 1.44
CDCP1-202ENST00000425231 PSPC1Q8WXF1 523 aaKnown RBP24.05■■□□□ 1.44
CDCP1-202ENST00000425231 AAASQ9NRG9 546 aa24.05■■□□□ 1.44
CDCP1-202ENST00000425231 BMP2KQ9NSY1 1161 aaPredicted RBP24.05■■□□□ 1.44
CDCP1-202ENST00000425231 BDP1A6H8Y1 2624 aa24.05■■□□□ 1.44
CDCP1-202ENST00000425231 GAS2O43903 313 aaKnown RBP24.04■■□□□ 1.44
CDCP1-202ENST00000425231 CSPG5O95196 566 aa24.04■■□□□ 1.44
CDCP1-202ENST00000425231 IRS1P35568 1242 aa24.04■■□□□ 1.44
CDCP1-202ENST00000425231 EMC2Q15006 297 aa24.04■■□□□ 1.44
CDCP1-202ENST00000425231 CLLU1OSQ5K130 101 aa24.04■■□□□ 1.44
CDCP1-202ENST00000425231 COLGALT1Q8NBJ5 622 aa24.04■■□□□ 1.44
CDCP1-202ENST00000425231 XPNPEP1Q9NQW7 623 aa24.04■■□□□ 1.44
CDCP1-202ENST00000425231 POTEMA6NI47 508 aa24.03■■□□□ 1.44
CDCP1-202ENST00000425231 NCK2O43639 380 aa24.03■■□□□ 1.44
CDCP1-202ENST00000425231 SRGAP2CP0DJJ0 459 aa24.03■■□□□ 1.44
CDCP1-202ENST00000425231 LTBRP36941 435 aa24.03■■□□□ 1.44
CDCP1-202ENST00000425231 LAMTOR4Q0VGL1 99 aa24.03■■□□□ 1.44
CDCP1-202ENST00000425231 RNF169Q8NCN4 708 aa24.03■■□□□ 1.44
CDCP1-202ENST00000425231 TCP11Q8WWU5 503 aa24.03■■□□□ 1.44
CDCP1-202ENST00000425231 ANKEF1Q9NU02 776 aa24.03■■□□□ 1.44
CDCP1-202ENST00000425231 H3BQ06 376 aaPredicted RBP24.02■■□□□ 1.44
CDCP1-202ENST00000425231 ASAP2O43150 1006 aa24.02■■□□□ 1.44
CDCP1-202ENST00000425231 FGF18O76093 207 aa24.02■■□□□ 1.44
CDCP1-202ENST00000425231 GTF2F1P35269 517 aaKnown RBP eCLIP24.02■■□□□ 1.44
CDCP1-202ENST00000425231 PHKA2P46019 1235 aa24.02■■□□□ 1.44
CDCP1-202ENST00000425231 ZNF174Q15697 407 aa24.02■■□□□ 1.44
CDCP1-202ENST00000425231 CATSPER4Q7RTX7 472 aa24.02■■□□□ 1.44
CDCP1-202ENST00000425231 FERMT3Q86UX7 667 aa24.02■■□□□ 1.44
CDCP1-202ENST00000425231 NOSTRINQ8IVI9 506 aa24.02■■□□□ 1.44
CDCP1-202ENST00000425231 ABI1Q8IZP0 508 aa24.02■■□□□ 1.44
CDCP1-202ENST00000425231 MTRQ99707 1265 aa24.02■■□□□ 1.44
CDCP1-202ENST00000425231 MINDY3Q9H8M7 445 aa24.02■■□□□ 1.44
CDCP1-202ENST00000425231 CLDND1Q9NY35 253 aa24.02■■□□□ 1.44
CDCP1-202ENST00000425231 PIN4Q9Y237 131 aaKnown RBP24.02■■□□□ 1.44
CDCP1-202ENST00000425231 SPATA31C1P0DKV0 1188 aa24.01■■□□□ 1.43
CDCP1-202ENST00000425231 LAG3P18627 525 aa24.01■■□□□ 1.43
CDCP1-202ENST00000425231 UBE3AQ05086 875 aa24.01■■□□□ 1.43
CDCP1-202ENST00000425231 ORC2Q13416 577 aaPredicted RBP24.01■■□□□ 1.43
CDCP1-202ENST00000425231 EP400NLQ6ZTU2 488 aa24.01■■□□□ 1.43
CDCP1-202ENST00000425231 SRGAP1Q7Z6B7 1085 aa24.01■■□□□ 1.43
CDCP1-202ENST00000425231 ADGRD2Q7Z7M1 963 aa24.01■■□□□ 1.43
CDCP1-202ENST00000425231 AGPAT5Q9NUQ2 364 aa24.01■■□□□ 1.43
CDCP1-202ENST00000425231 A0A087WWV3 80 aa24.01■■□□□ 1.43
CDCP1-202ENST00000425231 GRXCR2A6NFK2 248 aa24.01■■□□□ 1.43
CDCP1-202ENST00000425231 XRCC6P12956 609 aaKnown RBP eCLIP24.01■■□□□ 1.43
CDCP1-202ENST00000425231 U2AF2P26368 475 aaKnown RBP eCLIP24.01■■□□□ 1.43
CDCP1-202ENST00000425231 RARRES1P49788 294 aa24.01■■□□□ 1.43
CDCP1-202ENST00000425231 CSPP1Q1MSJ5 1256 aa24.01■■□□□ 1.43
CDCP1-202ENST00000425231 TWF2Q6IBS0 349 aaKnown RBP24.01■■□□□ 1.43
CDCP1-202ENST00000425231 PTCRAQ6ISU1 281 aaPredicted RBP24.01■■□□□ 1.43
CDCP1-202ENST00000425231 LRRC43Q8N309 656 aa24.01■■□□□ 1.43
CDCP1-202ENST00000425231 RNF149Q8NC42 400 aa24.01■■□□□ 1.43
CDCP1-202ENST00000425231 HELQQ8TDG4 1101 aa24.01■■□□□ 1.43
CDCP1-202ENST00000425231 PIGOQ8TEQ8 1089 aa24.01■■□□□ 1.43
CDCP1-202ENST00000425231 FAM105AQ9NUU6 356 aa24.01■■□□□ 1.43
CDCP1-202ENST00000425231 ST18O60284 1047 aa24■■□□□ 1.43
CDCP1-202ENST00000425231 ZNF623O75123 536 aa24■■□□□ 1.43
CDCP1-202ENST00000425231 TECP42680 631 aa24■■□□□ 1.43
CDCP1-202ENST00000425231 DLX2Q07687 328 aaPredicted RBP24■■□□□ 1.43
CDCP1-202ENST00000425231 TTC38Q5R3I4 469 aa24■■□□□ 1.43
CDCP1-202ENST00000425231 KCNT2Q6UVM3 1135 aa24■■□□□ 1.43
CDCP1-202ENST00000425231 CATSPER3Q86XQ3 398 aa24■■□□□ 1.43
CDCP1-202ENST00000425231 THNSL1Q8IYQ7 743 aa24■■□□□ 1.43
CDCP1-202ENST00000425231 IGFLR1Q9H665 355 aa24■■□□□ 1.43
CDCP1-202ENST00000425231 PCDHGC5Q9Y5F6 944 aa24■■□□□ 1.43
CDCP1-202ENST00000425231 LINC01565O15544 149 aa23.99■■□□□ 1.43
CDCP1-202ENST00000425231 DGAT1O75907 488 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms