RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 FAM212AQ96EL1 285 aa12.99□□□□□ -0.33
PTPRN-204ENST00000423636 PSMD1Q99460 953 aa12.99□□□□□ -0.33
PTPRN-204ENST00000423636 NAP1L4Q99733 375 aaKnown RBP12.99□□□□□ -0.33
PTPRN-204ENST00000423636 SEPT9Q9UHD8 586 aaPredicted RBP12.99□□□□□ -0.33
PTPRN-204ENST00000423636 PIK3CDO00329 1044 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 TBX3O15119 743 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 KIF20AO95235 890 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 KRT14P02533 472 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 MYL7Q01449 175 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 HSP90B2PQ58FF3 399 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 TMEM63BQ5T3F8 832 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 BICD1Q96G01 975 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 THAP2Q9H0W7 228 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 DPH5Q9H2P9 285 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 FAM204AQ9H8W3 233 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 AGO4Q9HCK5 861 aaKnown RBP12.98□□□□□ -0.33
PTPRN-204ENST00000423636 MMP14P50281 582 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 ATP1A2P50993 1020 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 FKBP1AP62942 108 aaKnown RBP12.98□□□□□ -0.33
PTPRN-204ENST00000423636 PPP2R5CQ13362 524 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 EDRF1Q3B7T1 1238 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 EHBP1Q8NDI1 1231 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 FAM118BQ9BPY3 351 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 INTS2Q9H0H0 1204 aaKnown RBP12.98□□□□□ -0.33
PTPRN-204ENST00000423636 VWA5AO00534 786 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 DDNO94850 711 aaPredicted RBP12.98□□□□□ -0.33
PTPRN-204ENST00000423636 HEXIM1O94992 359 aaKnown RBP12.98□□□□□ -0.33
PTPRN-204ENST00000423636 ADRB2P07550 413 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 HNRNPH3P31942 346 aaKnown RBP12.98□□□□□ -0.33
PTPRN-204ENST00000423636 QARSP47897 775 aaKnown RBP12.98□□□□□ -0.33
PTPRN-204ENST00000423636 DPY19L2P1Q6NXN4 242 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 ANO5Q75V66 913 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 ZBTB45Q96K62 511 aaPredicted RBP12.98□□□□□ -0.33
PTPRN-204ENST00000423636 PDCD2LQ9BRP1 358 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 PICK1Q9NRD5 415 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 PGAP2Q9UHJ9 254 aa12.98□□□□□ -0.33
PTPRN-204ENST00000423636 CYP26A1O43174 497 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 ZNF862O60290 1169 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 RNF40O75150 1001 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 CAPN2P17655 700 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 MARCKSL1P49006 195 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 ACOT2P49753 483 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 TMEM132BQ14DG7 1078 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 COBLL1Q53SF7 1204 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 SPOPLQ6IQ16 392 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 FRMD5Q7Z6J6 570 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 TSGA10Q9BZW7 698 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 RAB21Q9UL25 225 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 PPP1R9AQ9ULJ8 1098 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 GNA14O95837 355 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 NR3C2P08235 984 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 STAT1P42224 750 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 HNRNPH2P55795 449 aaKnown RBP12.97□□□□□ -0.33
PTPRN-204ENST00000423636 SP2Q02086 613 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 NAB2Q15742 525 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 CCNI2Q6ZMN8 369 aaPredicted RBP12.97□□□□□ -0.33
PTPRN-204ENST00000423636 SLC38A10Q9HBR0 1119 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 AMACRQ9UHK6 382 aa12.97□□□□□ -0.33
PTPRN-204ENST00000423636 DENND3A2RUS2 1198 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 MAP2K7O14733 419 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 SGPL1O95470 568 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 GJC1P36383 396 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 RPS6KA1Q15418 735 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 PEX26Q7Z412 305 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 FAM160B2Q86V87 743 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 AGBL3Q8NEM8 1001 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 SEMA4DQ92854 862 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 TUFT1Q9NNX1 390 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 HSPBP1Q9NZL4 362 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 RAD51CO43502 376 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 PGK2P07205 417 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 P4HBP07237 508 aaKnown RBP12.96□□□□□ -0.33
PTPRN-204ENST00000423636 GJB1P08034 283 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 HIRAP54198 1017 aaPredicted RBP12.96□□□□□ -0.33
PTPRN-204ENST00000423636 OSTNP61366 133 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 TREML2Q5T2D2 321 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 MOXD1Q6UVY6 613 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 SLC47A2Q86VL8 602 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 TRIM50Q86XT4 487 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 TAF4BQ92750 862 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 FAM213AQ9BRX8 229 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 ANKFY1Q9P2R3 1169 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 FAM184BQ9ULE4 1060 aa12.96□□□□□ -0.33
PTPRN-204ENST00000423636 ADM5C9JUS6 153 aa12.96□□□□□ -0.34
PTPRN-204ENST00000423636 F8VZ95 297 aa12.96□□□□□ -0.34
PTPRN-204ENST00000423636 PPP1R12BO60237 982 aaPredicted RBP12.96□□□□□ -0.34
PTPRN-204ENST00000423636 BUB1BO60566 1050 aaPredicted RBP12.96□□□□□ -0.34
PTPRN-204ENST00000423636 ZBED4O75132 1171 aa12.96□□□□□ -0.34
PTPRN-204ENST00000423636 WNT7BP56706 349 aa12.96□□□□□ -0.34
PTPRN-204ENST00000423636 CKAP4Q07065 602 aaKnown RBP12.96□□□□□ -0.34
PTPRN-204ENST00000423636 BFSP1Q12934 665 aa12.96□□□□□ -0.34
PTPRN-204ENST00000423636 ZBTB41Q5SVQ8 909 aa12.96□□□□□ -0.34
PTPRN-204ENST00000423636 NLRX1Q86UT6 975 aa12.96□□□□□ -0.34
PTPRN-204ENST00000423636 PASD1Q8IV76 773 aa12.96□□□□□ -0.34
PTPRN-204ENST00000423636 METTL13Q8N6R0 699 aa12.96□□□□□ -0.34
PTPRN-204ENST00000423636 SLC35G2Q8TBE7 412 aa12.96□□□□□ -0.34
PTPRN-204ENST00000423636 TATDN2Q93075 761 aa12.96□□□□□ -0.34
PTPRN-204ENST00000423636 PXMP2Q9NR77 195 aa12.96□□□□□ -0.34
PTPRN-204ENST00000423636 BCCIPQ9P287 314 aaKnown RBP eCLIP12.96□□□□□ -0.34
PTPRN-204ENST00000423636 HPCAL4Q9UM19 191 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms