RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 INO80BQ9C086 356 aaPredicted RBP24.45■■□□□ 1.5
TRAF4-204ENST00000422344 DHX33Q9H6R0 707 aaKnown RBP24.45■■□□□ 1.5
TRAF4-204ENST00000422344 BMP2KQ9NSY1 1161 aaPredicted RBP24.45■■□□□ 1.5
TRAF4-204ENST00000422344 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.45■■□□□ 1.5
TRAF4-204ENST00000422344 A0A087WZ62 844 aa24.44■■□□□ 1.5
TRAF4-204ENST00000422344 C9IYK1 514 aa24.44■■□□□ 1.5
TRAF4-204ENST00000422344 GAS2O43903 313 aaKnown RBP24.44■■□□□ 1.5
TRAF4-204ENST00000422344 LYPLA2O95372 231 aa24.44■■□□□ 1.5
TRAF4-204ENST00000422344 SFPQP23246 707 aaKnown RBP eCLIP24.44■■□□□ 1.5
TRAF4-204ENST00000422344 SSTR3P32745 418 aaPredicted RBP24.44■■□□□ 1.5
TRAF4-204ENST00000422344 TECP42680 631 aa24.44■■□□□ 1.5
TRAF4-204ENST00000422344 EMC2Q15006 297 aa24.44■■□□□ 1.5
TRAF4-204ENST00000422344 PAN2Q504Q3 1202 aaKnown RBP24.44■■□□□ 1.5
TRAF4-204ENST00000422344 CRIPAKQ8N1N5 446 aa24.44■■□□□ 1.5
TRAF4-204ENST00000422344 PSPC1Q8WXF1 523 aaKnown RBP24.44■■□□□ 1.5
TRAF4-204ENST00000422344 FDXACB1Q9BRP7 624 aaPredicted RBP24.44■■□□□ 1.5
TRAF4-204ENST00000422344 BACH2Q9BYV9 841 aa24.44■■□□□ 1.5
TRAF4-204ENST00000422344 ATP6V0A4Q9HBG4 840 aa24.44■■□□□ 1.5
TRAF4-204ENST00000422344 COL4A3BPQ9Y5P4 624 aa24.44■■□□□ 1.5
TRAF4-204ENST00000422344 MYO7AQ13402 2215 aa24.44■■□□□ 1.5
TRAF4-204ENST00000422344 RALGAPA2Q2PPJ7 1873 aa24.43■■□□□ 1.5
TRAF4-204ENST00000422344 H3BNC9 293 aa24.43■■□□□ 1.5
TRAF4-204ENST00000422344 ZBTB39O15060 712 aa24.43■■□□□ 1.5
TRAF4-204ENST00000422344 FGFR4P22455 802 aa24.43■■□□□ 1.5
TRAF4-204ENST00000422344 DSC3Q14574 896 aa24.43■■□□□ 1.5
TRAF4-204ENST00000422344 TMEM143Q96AN5 459 aa24.43■■□□□ 1.5
TRAF4-204ENST00000422344 MTRQ99707 1265 aa24.43■■□□□ 1.5
TRAF4-204ENST00000422344 C11orf84Q9BUA3 381 aaPredicted RBP24.43■■□□□ 1.5
TRAF4-204ENST00000422344 ANKEF1Q9NU02 776 aa24.43■■□□□ 1.5
TRAF4-204ENST00000422344 TMEM161AQ9NX61 479 aa24.43■■□□□ 1.5
TRAF4-204ENST00000422344 NLRC5Q86WI3 1866 aa24.43■■□□□ 1.5
TRAF4-204ENST00000422344 MUC6Q6W4X9 2439 aa24.42■■□□□ 1.5
TRAF4-204ENST00000422344 H3BQ06 376 aaPredicted RBP24.42■■□□□ 1.5
TRAF4-204ENST00000422344 CSDE1O75534 798 aaKnown RBP24.42■■□□□ 1.5
TRAF4-204ENST00000422344 RB1P06400 928 aa24.42■■□□□ 1.5
TRAF4-204ENST00000422344 BMPR1AP36894 532 aa24.42■■□□□ 1.5
TRAF4-204ENST00000422344 TIGD5Q53EQ6 642 aa24.42■■□□□ 1.5
TRAF4-204ENST00000422344 KSR1Q8IVT5 923 aa24.42■■□□□ 1.5
TRAF4-204ENST00000422344 TUFT1Q9NNX1 390 aa24.42■■□□□ 1.5
TRAF4-204ENST00000422344 DACT1Q9NYF0 836 aa24.42■■□□□ 1.5
TRAF4-204ENST00000422344 MRPL42Q9Y6G3 142 aaKnown RBP24.42■■□□□ 1.5
TRAF4-204ENST00000422344 GRXCR2A6NFK2 248 aa24.41■■□□□ 1.5
TRAF4-204ENST00000422344 GATMP50440 423 aa24.41■■□□□ 1.5
TRAF4-204ENST00000422344 NBR1Q14596 966 aa24.41■■□□□ 1.5
TRAF4-204ENST00000422344 EP400NLQ6ZTU2 488 aa24.41■■□□□ 1.5
TRAF4-204ENST00000422344 PRPF31Q8WWY3 499 aaKnown RBP24.41■■□□□ 1.5
TRAF4-204ENST00000422344 CLP1Q92989 425 aaKnown RBP24.41■■□□□ 1.5
TRAF4-204ENST00000422344 ELAC1Q9H777 363 aaKnown RBP24.41■■□□□ 1.5
TRAF4-204ENST00000422344 ARID2Q68CP9 1835 aa24.4■■□□□ 1.5
TRAF4-204ENST00000422344 TBKBP1A7MCY6 615 aa24.4■■□□□ 1.5
TRAF4-204ENST00000422344 HOXA2O43364 376 aa24.4■■□□□ 1.5
TRAF4-204ENST00000422344 DGAT1O75907 488 aa24.4■■□□□ 1.5
TRAF4-204ENST00000422344 SRGAP2CP0DJJ0 459 aa24.4■■□□□ 1.5
TRAF4-204ENST00000422344 FAM189BP81408 668 aa24.4■■□□□ 1.5
TRAF4-204ENST00000422344 TCEAL5Q5H9L2 206 aa24.4■■□□□ 1.5
TRAF4-204ENST00000422344 SPOUT1Q5T280 376 aaKnown RBP24.4■■□□□ 1.5
TRAF4-204ENST00000422344 CATSPER4Q7RTX7 472 aa24.4■■□□□ 1.5
TRAF4-204ENST00000422344 CHST12Q9NRB3 414 aa24.4■■□□□ 1.5
TRAF4-204ENST00000422344 C5orf67F2Z3F1 127 aa24.39■■□□□ 1.49
TRAF4-204ENST00000422344 ASAP2O43150 1006 aa24.39■■□□□ 1.49
TRAF4-204ENST00000422344 XRCC6P12956 609 aaKnown RBP eCLIP24.39■■□□□ 1.493e-10■■□□□ 12.6
TRAF4-204ENST00000422344 LAMTOR4Q0VGL1 99 aa24.39■■□□□ 1.49
TRAF4-204ENST00000422344 PUS10Q3MIT2 529 aaKnown RBP24.39■■□□□ 1.49
TRAF4-204ENST00000422344 HAUS3Q68CZ6 603 aa24.39■■□□□ 1.49
TRAF4-204ENST00000422344 CATSPER3Q86XQ3 398 aa24.39■■□□□ 1.49
TRAF4-204ENST00000422344 ABI1Q8IZP0 508 aa24.39■■□□□ 1.49
TRAF4-204ENST00000422344 RNF169Q8NCN4 708 aa24.39■■□□□ 1.49
TRAF4-204ENST00000422344 PIGOQ8TEQ8 1089 aa24.39■■□□□ 1.49
TRAF4-204ENST00000422344 POLR3CQ9BUI4 534 aaPredicted RBP24.39■■□□□ 1.49
TRAF4-204ENST00000422344 PLVAPQ9BX97 442 aa24.39■■□□□ 1.49
TRAF4-204ENST00000422344 RAB34Q9BZG1 259 aa24.39■■□□□ 1.49
TRAF4-204ENST00000422344 SPATA31C1P0DKV0 1188 aa24.38■■□□□ 1.49
TRAF4-204ENST00000422344 FGFR1P11362 822 aa24.38■■□□□ 1.49
TRAF4-204ENST00000422344 RARRES1P49788 294 aa24.38■■□□□ 1.49
TRAF4-204ENST00000422344 TOB1P50616 345 aaPredicted RBP24.38■■□□□ 1.49
TRAF4-204ENST00000422344 MXD4Q14582 209 aaPredicted RBP24.38■■□□□ 1.49
TRAF4-204ENST00000422344 RILPL1Q5EBL4 403 aa24.38■■□□□ 1.49
TRAF4-204ENST00000422344 FAM102BQ5T8I3 360 aa24.38■■□□□ 1.49
TRAF4-204ENST00000422344 LARP1BQ659C4 914 aaKnown RBP24.38■■□□□ 1.49
TRAF4-204ENST00000422344 FERMT3Q86UX7 667 aa24.38■■□□□ 1.49
TRAF4-204ENST00000422344 ECHDC2Q86YB7 292 aa24.38■■□□□ 1.49
TRAF4-204ENST00000422344 PABPC5Q96DU9 382 aaKnown RBP24.38■■□□□ 1.49
TRAF4-204ENST00000422344 NACC1Q96RE7 527 aa24.38■■□□□ 1.49
TRAF4-204ENST00000422344 PIN4Q9Y237 131 aaKnown RBP24.38■■□□□ 1.49
TRAF4-204ENST00000422344 PCDHB6Q9Y5E3 794 aa24.38■■□□□ 1.49
TRAF4-204ENST00000422344 LAD1O00515 517 aa24.37■■□□□ 1.49
TRAF4-204ENST00000422344 MED24O75448 989 aa24.37■■□□□ 1.49
TRAF4-204ENST00000422344 LINC00271P0C7V0 271 aa24.37■■□□□ 1.49
TRAF4-204ENST00000422344 PHKA2P46019 1235 aa24.37■■□□□ 1.49
TRAF4-204ENST00000422344 FXR2P51116 673 aaKnown RBP eCLIP24.37■■□□□ 1.49
TRAF4-204ENST00000422344 PTGDRQ13258 359 aa24.37■■□□□ 1.49
TRAF4-204ENST00000422344 TFDP1Q14186 410 aa24.37■■□□□ 1.49
TRAF4-204ENST00000422344 TWF2Q6IBS0 349 aaKnown RBP24.37■■□□□ 1.49
TRAF4-204ENST00000422344 SRGAP1Q7Z6B7 1085 aa24.37■■□□□ 1.49
TRAF4-204ENST00000422344 RNF149Q8NC42 400 aa24.37■■□□□ 1.49
TRAF4-204ENST00000422344 LMAN2LQ9H0V9 348 aa24.37■■□□□ 1.49
TRAF4-204ENST00000422344 NSUN3Q9H649 340 aaKnown RBP24.37■■□□□ 1.49
TRAF4-204ENST00000422344 IFT122Q9HBG6 1241 aa24.37■■□□□ 1.49
TRAF4-204ENST00000422344 AAASQ9NRG9 546 aa24.37■■□□□ 1.49
TRAF4-204ENST00000422344 LRWD1Q9UFC0 647 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms