RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 IFT122Q9HBG6 1241 aa20.62■□□□□ 0.89
DDR1-233ENST00000421124 TTC3P53804 2025 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.61■□□□□ 0.89
DDR1-233ENST00000421124 SOX1O00570 391 aaPredicted RBP20.61■□□□□ 0.89
DDR1-233ENST00000421124 AMHP03971 560 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 PHKA2P46019 1235 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 ME1P48163 572 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 SLC12A3P55017 1021 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 POU5F1BQ06416 359 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 CAPSQ13938 189 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 SRGAP1Q7Z6B7 1085 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 LRRC15Q8TF66 581 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 RAD54LQ92698 747 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 KIFAP3Q92845 792 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 CHAMP1Q96JM3 812 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 SPATA32Q96LK8 384 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 RUSC1Q9BVN2 902 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 TMX1Q9H3N1 280 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 BLOC1S4Q9NUP1 217 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 CIZ1Q9ULV3 898 aaPredicted RBP20.61■□□□□ 0.89
DDR1-233ENST00000421124 PCDHA7Q9UN72 937 aa20.61■□□□□ 0.89
DDR1-233ENST00000421124 GRXCR1A8MXD5 290 aa20.6■□□□□ 0.89
DDR1-233ENST00000421124 ENPP3O14638 875 aa20.6■□□□□ 0.89
DDR1-233ENST00000421124 CSDE1O75534 798 aaKnown RBP20.6■□□□□ 0.89
DDR1-233ENST00000421124 FGFR4P22455 802 aa20.6■□□□□ 0.89
DDR1-233ENST00000421124 SFPQP23246 707 aaKnown RBP eCLIP20.6■□□□□ 0.89
DDR1-233ENST00000421124 AXDND1Q5T1B0 1012 aaPredicted RBP20.6■□□□□ 0.89
DDR1-233ENST00000421124 RRAGBQ5VZM2 374 aa20.6■□□□□ 0.89
DDR1-233ENST00000421124 C1orf186Q6ZWK4 172 aa20.6■□□□□ 0.89
DDR1-233ENST00000421124 MYOCDQ8IZQ8 938 aa20.6■□□□□ 0.89
DDR1-233ENST00000421124 LEO1Q8WVC0 666 aaPredicted RBP20.6■□□□□ 0.89
DDR1-233ENST00000421124 LINC01599Q8WXQ3 324 aa20.6■□□□□ 0.89
DDR1-233ENST00000421124 TIPINQ9BVW5 301 aa20.6■□□□□ 0.89
DDR1-233ENST00000421124 KCND2Q9NZV8 630 aa20.6■□□□□ 0.89
DDR1-233ENST00000421124 STK17AQ9UEE5 414 aa20.6■□□□□ 0.89
DDR1-233ENST00000421124 GUCY2CP25092 1073 aa20.59■□□□□ 0.89
DDR1-233ENST00000421124 PTENP60484 403 aa20.59■□□□□ 0.89
DDR1-233ENST00000421124 MCM6Q14566 821 aa20.59■□□□□ 0.89
DDR1-233ENST00000421124 SHC4Q6S5L8 630 aa20.59■□□□□ 0.89
DDR1-233ENST00000421124 CCDC73Q6ZRK6 1079 aa20.59■□□□□ 0.89
DDR1-233ENST00000421124 RTN4RL1Q86UN2 441 aaPredicted RBP20.59■□□□□ 0.89
DDR1-233ENST00000421124 IFNLR1Q8IU57 520 aaPredicted RBP20.59■□□□□ 0.89
DDR1-233ENST00000421124 HERC6Q8IVU3 1022 aa20.59■□□□□ 0.89
DDR1-233ENST00000421124 LARP4BQ92615 738 aaKnown RBP20.59■□□□□ 0.89
DDR1-233ENST00000421124 DRC1Q96MC2 740 aa20.59■□□□□ 0.89
DDR1-233ENST00000421124 SCAND2PQ9GZW5 306 aaPredicted RBP20.59■□□□□ 0.89
DDR1-233ENST00000421124 TSPYL2Q9H2G4 693 aaPredicted RBP20.59■□□□□ 0.89
DDR1-233ENST00000421124 DENND3A2RUS2 1198 aa20.58■□□□□ 0.89
DDR1-233ENST00000421124 LRRIQ4A6NIV6 560 aa20.58■□□□□ 0.89
DDR1-233ENST00000421124 MGEA5O60502 916 aa20.58■□□□□ 0.89
DDR1-233ENST00000421124 HIP1RO75146 1068 aa20.58■□□□□ 0.89
DDR1-233ENST00000421124 FXR1P51114 621 aaKnown RBP eCLIP20.58■□□□□ 0.89
DDR1-233ENST00000421124 DHX8Q14562 1220 aaKnown RBP20.58■□□□□ 0.89
DDR1-233ENST00000421124 PPP2R5AQ15172 486 aa20.58■□□□□ 0.89
DDR1-233ENST00000421124 CATSPER4Q7RTX7 472 aa20.58■□□□□ 0.89
DDR1-233ENST00000421124 BSNDQ8WZ55 320 aa20.58■□□□□ 0.89
DDR1-233ENST00000421124 LRCH3Q96II8 777 aa20.58■□□□□ 0.89
DDR1-233ENST00000421124 IFT74Q96LB3 600 aa20.58■□□□□ 0.89
DDR1-233ENST00000421124 ADAM2Q99965 735 aa20.58■□□□□ 0.89
DDR1-233ENST00000421124 NFKBIZQ9BYH8 718 aa20.58■□□□□ 0.89
DDR1-233ENST00000421124 MINDY3Q9H8M7 445 aa20.58■□□□□ 0.89
DDR1-233ENST00000421124 POLD4Q9HCU8 107 aa20.58■□□□□ 0.89
DDR1-233ENST00000421124 LAMA2P24043 3122 aaKnown RBP20.58■□□□□ 0.88
DDR1-233ENST00000421124 A0A087X0B3 334 aa20.57■□□□□ 0.88
DDR1-233ENST00000421124 ZSCAN20P17040 1043 aaPredicted RBP20.57■□□□□ 0.88
DDR1-233ENST00000421124 STAT6P42226 847 aa20.57■□□□□ 0.88
DDR1-233ENST00000421124 NAMPTP43490 491 aa20.57■□□□□ 0.88
DDR1-233ENST00000421124 MAPK7Q13164 816 aa20.57■□□□□ 0.88
DDR1-233ENST00000421124 DSC3Q14574 896 aa20.57■□□□□ 0.88
DDR1-233ENST00000421124 RAB30Q15771 203 aa20.57■□□□□ 0.88
DDR1-233ENST00000421124 TMCO2Q7Z6W1 182 aaPredicted RBP20.57■□□□□ 0.88
DDR1-233ENST00000421124 GPBP1Q86WP2 473 aa20.57■□□□□ 0.88
DDR1-233ENST00000421124 DAW1Q8N136 415 aa20.57■□□□□ 0.88
DDR1-233ENST00000421124 TOP1MTQ969P6 601 aa20.57■□□□□ 0.88
DDR1-233ENST00000421124 ZBED2Q9BTP6 218 aa20.57■□□□□ 0.88
DDR1-233ENST00000421124 PBX4Q9BYU1 374 aa20.57■□□□□ 0.88
DDR1-233ENST00000421124 PANK2Q9BZ23 570 aa20.57■□□□□ 0.88
DDR1-233ENST00000421124 RGS18Q9NS28 235 aa20.57■□□□□ 0.88
DDR1-233ENST00000421124 C1orf112Q9NSG2 853 aa20.57■□□□□ 0.88
DDR1-233ENST00000421124 MSRAQ9UJ68 235 aa20.57■□□□□ 0.88
DDR1-233ENST00000421124 PCDHA11Q9Y5I1 949 aa20.57■□□□□ 0.88
DDR1-233ENST00000421124 GJB5O95377 273 aa20.56■□□□□ 0.88
DDR1-233ENST00000421124 DNAJB2P25686 324 aa20.56■□□□□ 0.88
DDR1-233ENST00000421124 PBX2P40425 430 aa20.56■□□□□ 0.88
DDR1-233ENST00000421124 RABGGTBP53611 331 aa20.56■□□□□ 0.88
DDR1-233ENST00000421124 RAD51AP2Q09MP3 1159 aa20.56■□□□□ 0.88
DDR1-233ENST00000421124 PCBP1Q15365 356 aaKnown RBP eCLIP20.56■□□□□ 0.88
DDR1-233ENST00000421124 NAALADL2Q58DX5 795 aa20.56■□□□□ 0.88
DDR1-233ENST00000421124 ARSHQ5FYA8 562 aa20.56■□□□□ 0.88
DDR1-233ENST00000421124 RESP18Q5W5W9 173 aa20.56■□□□□ 0.88
DDR1-233ENST00000421124 FAM117BQ6P1L5 589 aa20.56■□□□□ 0.88
DDR1-233ENST00000421124 ZBTB8OSQ8IWT0 167 aa20.56■□□□□ 0.88
DDR1-233ENST00000421124 PDILTQ8N807 584 aa20.56■□□□□ 0.88
DDR1-233ENST00000421124 CHST12Q9NRB3 414 aa20.56■□□□□ 0.88
DDR1-233ENST00000421124 TSHZ2Q9NRE2 1034 aa20.56■□□□□ 0.88
DDR1-233ENST00000421124 FAM13BQ9NYF5 915 aa20.56■□□□□ 0.88
DDR1-233ENST00000421124 RBM19Q9Y4C8 960 aaKnown RBP20.56■□□□□ 0.88
DDR1-233ENST00000421124 LAMA3Q16787 3333 aa20.56■□□□□ 0.88
DDR1-233ENST00000421124 NPHP3-ACAD11A0A0J9YXS1 232 aa20.55■□□□□ 0.88
DDR1-233ENST00000421124 INO80B-WBP1J3KQ70 363 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms