RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 DARSP14868 501 aaKnown RBP20.25■□□□□ 0.83
ECHDC3-202ENST00000420401 GDPD5Q8WTR4 605 aa20.25■□□□□ 0.83
ECHDC3-202ENST00000420401 PRPF31Q8WWY3 499 aaKnown RBP20.25■□□□□ 0.83
ECHDC3-202ENST00000420401 KHSRPQ92945 711 aaKnown RBP eCLIP20.25■□□□□ 0.83
ECHDC3-202ENST00000420401 TOP1MTQ969P6 601 aa20.25■□□□□ 0.83
ECHDC3-202ENST00000420401 RAD9AQ99638 391 aa20.25■□□□□ 0.83
ECHDC3-202ENST00000420401 INO80BQ9C086 356 aaPredicted RBP20.25■□□□□ 0.83
ECHDC3-202ENST00000420401 BMP2KQ9NSY1 1161 aaPredicted RBP20.25■□□□□ 0.83
ECHDC3-202ENST00000420401 KIAA1024Q9UPX6 916 aa20.25■□□□□ 0.83
ECHDC3-202ENST00000420401 COL4A3BPQ9Y5P4 624 aa20.25■□□□□ 0.83
ECHDC3-202ENST00000420401 EVPLQ92817 2033 aa20.24■□□□□ 0.83
ECHDC3-202ENST00000420401 ARHGEF35A5YM69 484 aa20.24■□□□□ 0.83
ECHDC3-202ENST00000420401 RBAK-RBAKDNI3L0D1 243 aa20.24■□□□□ 0.83
ECHDC3-202ENST00000420401 LPXNO60711 386 aa20.24■□□□□ 0.83
ECHDC3-202ENST00000420401 BECN1Q14457 450 aa20.24■□□□□ 0.83
ECHDC3-202ENST00000420401 FAM117BQ6P1L5 589 aa20.24■□□□□ 0.83
ECHDC3-202ENST00000420401 SPRED2Q7Z698 418 aa20.24■□□□□ 0.83
ECHDC3-202ENST00000420401 TMCO2Q7Z6W1 182 aaPredicted RBP20.24■□□□□ 0.83
ECHDC3-202ENST00000420401 FAM228AQ86W67 206 aa20.24■□□□□ 0.83
ECHDC3-202ENST00000420401 ZNF668Q96K58 619 aaPredicted RBP20.24■□□□□ 0.83
ECHDC3-202ENST00000420401 AK8Q96MA6 479 aa20.24■□□□□ 0.83
ECHDC3-202ENST00000420401 DNM3Q9UQ16 869 aa20.24■□□□□ 0.83
ECHDC3-202ENST00000420401 MUC6Q6W4X9 2439 aa20.24■□□□□ 0.83
ECHDC3-202ENST00000420401 A0A087WZ62 844 aa20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 LCHNA4D1U4 455 aa20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 PP2D1A8MPX8 630 aa20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 PI4K2BG5E9Z4 385 aa20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 LAMTOR4Q0VGL1 99 aa20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 MXD4Q14582 209 aaPredicted RBP20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 KSR1Q8IVT5 923 aa20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 MCPH1Q8NEM0 835 aa20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 NLRP4Q96MN2 994 aa20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 FDXACB1Q9BRP7 624 aaPredicted RBP20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 TMX1Q9H3N1 280 aa20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 C11orf16Q9NQ32 467 aa20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 DDX19AQ9NUU7 478 aaKnown RBP20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 RNF216Q9NWF9 866 aaPredicted RBP20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 MTUS1Q9ULD2 1270 aa20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 INSL6Q9Y581 213 aa20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 CLIC4Q9Y696 253 aa20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 SIP14410 1827 aa20.23■□□□□ 0.83
ECHDC3-202ENST00000420401 DENND3A2RUS2 1198 aa20.22■□□□□ 0.83
ECHDC3-202ENST00000420401 USO1O60763 962 aaKnown RBP20.22■□□□□ 0.83
ECHDC3-202ENST00000420401 UPP2O95045 317 aa20.22■□□□□ 0.83
ECHDC3-202ENST00000420401 SRGAP2CP0DJJ0 459 aa20.22■□□□□ 0.83
ECHDC3-202ENST00000420401 SFPQP23246 707 aaKnown RBP eCLIP20.22■□□□□ 0.83
ECHDC3-202ENST00000420401 CDC25AP30304 524 aa20.22■□□□□ 0.83
ECHDC3-202ENST00000420401 LONP1P36776 959 aaKnown RBP20.22■□□□□ 0.83
ECHDC3-202ENST00000420401 TFDP1Q14186 410 aa20.22■□□□□ 0.83
ECHDC3-202ENST00000420401 ECM1Q16610 540 aa20.22■□□□□ 0.83
ECHDC3-202ENST00000420401 FAM173BQ6P4H8 233 aa20.22■□□□□ 0.83
ECHDC3-202ENST00000420401 PADI6Q6TGC4 694 aa20.22■□□□□ 0.83
ECHDC3-202ENST00000420401 RTN4RL1Q86UN2 441 aaPredicted RBP20.22■□□□□ 0.83
ECHDC3-202ENST00000420401 KCTD17Q8N5Z5 321 aa20.22■□□□□ 0.83
ECHDC3-202ENST00000420401 XPNPEP1Q9NQW7 623 aa20.22■□□□□ 0.83
ECHDC3-202ENST00000420401 C1orf112Q9NSG2 853 aa20.22■□□□□ 0.83
ECHDC3-202ENST00000420401 SLC26A4O43511 780 aa20.21■□□□□ 0.83
ECHDC3-202ENST00000420401 ZSCAN22P10073 491 aaPredicted RBP20.21■□□□□ 0.83
ECHDC3-202ENST00000420401 ZSCAN20P17040 1043 aaPredicted RBP20.21■□□□□ 0.83
ECHDC3-202ENST00000420401 UBA7P41226 1012 aa20.21■□□□□ 0.83
ECHDC3-202ENST00000420401 ZRSR1Q15695 479 aaKnown RBP20.21■□□□□ 0.83
ECHDC3-202ENST00000420401 LINC01599Q8WXQ3 324 aa20.21■□□□□ 0.83
ECHDC3-202ENST00000420401 CDK5RAP3Q96JB5 506 aa20.21■□□□□ 0.83
ECHDC3-202ENST00000420401 ZNF396Q96N95 335 aaPredicted RBP20.21■□□□□ 0.83
ECHDC3-202ENST00000420401 YME1L1Q96TA2 773 aa20.21■□□□□ 0.83
ECHDC3-202ENST00000420401 ADAM2Q99965 735 aa20.21■□□□□ 0.83
ECHDC3-202ENST00000420401 MMTAG2Q9BU76 263 aaKnown RBP20.21■□□□□ 0.83
ECHDC3-202ENST00000420401 NT5C3AQ9H0P0 336 aa20.21■□□□□ 0.83
ECHDC3-202ENST00000420401 BHMT2Q9H2M3 363 aa20.21■□□□□ 0.83
ECHDC3-202ENST00000420401 UBE2ZQ9H832 354 aaPredicted RBP20.21■□□□□ 0.83
ECHDC3-202ENST00000420401 CD320Q9NPF0 282 aa20.21■□□□□ 0.83
ECHDC3-202ENST00000420401 RGS18Q9NS28 235 aa20.21■□□□□ 0.83
ECHDC3-202ENST00000420401 EYA4O95677 639 aa20.2■□□□□ 0.82
ECHDC3-202ENST00000420401 STAG3L1P0CL83 205 aa20.2■□□□□ 0.82
ECHDC3-202ENST00000420401 CYP11B2P19099 503 aa20.2■□□□□ 0.82
ECHDC3-202ENST00000420401 SSTR3P32745 418 aaPredicted RBP20.2■□□□□ 0.82
ECHDC3-202ENST00000420401 ARL2P36404 184 aa20.2■□□□□ 0.82
ECHDC3-202ENST00000420401 HTRA4P83105 476 aaPredicted RBP20.2■□□□□ 0.82
ECHDC3-202ENST00000420401 CEBPZQ03701 1054 aaKnown RBP20.2■□□□□ 0.82
ECHDC3-202ENST00000420401 PTPAQ15257 358 aa20.2■□□□□ 0.82
ECHDC3-202ENST00000420401 SRGAP1Q7Z6B7 1085 aa20.2■□□□□ 0.82
ECHDC3-202ENST00000420401 ALYREFQ86V81 257 aaKnown RBP20.2■□□□□ 0.82
ECHDC3-202ENST00000420401 TGS1Q96RS0 853 aaKnown RBP20.2■□□□□ 0.82
ECHDC3-202ENST00000420401 IFT122Q9HBG6 1241 aa20.2■□□□□ 0.82
ECHDC3-202ENST00000420401 LRFN2Q9ULH4 789 aa20.2■□□□□ 0.82
ECHDC3-202ENST00000420401 MICAL3Q7RTP6 2002 aa20.19■□□□□ 0.82
ECHDC3-202ENST00000420401 PHKA2P46019 1235 aa20.19■□□□□ 0.82
ECHDC3-202ENST00000420401 SARSP49591 514 aaKnown RBP20.19■□□□□ 0.82
ECHDC3-202ENST00000420401 HYIQ5T013 277 aa20.19■□□□□ 0.82
ECHDC3-202ENST00000420401 FAM102BQ5T8I3 360 aa20.19■□□□□ 0.82
ECHDC3-202ENST00000420401 SLC24A5Q71RS6 500 aa20.19■□□□□ 0.82
ECHDC3-202ENST00000420401 CABP7Q86V35 215 aa20.19■□□□□ 0.82
ECHDC3-202ENST00000420401 NPAS4Q8IUM7 802 aa20.19■□□□□ 0.82
ECHDC3-202ENST00000420401 GJD3Q8N144 294 aa20.19■□□□□ 0.82
ECHDC3-202ENST00000420401 RNF149Q8NC42 400 aa20.19■□□□□ 0.82
ECHDC3-202ENST00000420401 CALML4Q96GE6 196 aa20.19■□□□□ 0.82
ECHDC3-202ENST00000420401 USP28Q96RU2 1077 aa20.19■□□□□ 0.82
ECHDC3-202ENST00000420401 POLR3FQ9H1D9 316 aaPredicted RBP20.19■□□□□ 0.82
ECHDC3-202ENST00000420401 CHST12Q9NRB3 414 aa20.19■□□□□ 0.82
ECHDC3-202ENST00000420401 PIEZO1Q92508 2521 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms