RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 PCP11498 1178 aaKnown RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 ATP6V1C1P21283 382 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 MAPK1P28482 360 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 KIF5BP33176 963 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 PHKA1P46020 1223 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 GNAQP50148 359 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 CABP4P57796 275 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 MRPS35P82673 323 aaKnown RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 ARHGAP4P98171 946 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 DHX9Q08211 1270 aaKnown RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 CUL3Q13618 768 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 AGERQ15109 404 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 MAN2A1Q16706 1144 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 C1QTNF12Q5T7M4 302 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 CCDC84Q86UT8 332 aaPredicted RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 NCAPG2Q86XI2 1143 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 ZNF513Q8N8E2 541 aaPredicted RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 ANKLE1Q8NAG6 615 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 ESR2Q92731 530 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 KLHL29Q96CT2 875 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 SLC10A4Q96EP9 437 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 ANKRD27Q96NW4 1050 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 RPS6KC1Q96S38 1066 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 PRMT1Q99873 361 aaKnown RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 AP1M1Q9BXS5 423 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 PACSIN1Q9BY11 444 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 UBE2OQ9C0C9 1292 aaKnown RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 RAB17Q9H0T7 212 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 TMX4Q9H1E5 349 aaPredicted RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 AZI2Q9H6S1 392 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 ARMT1Q9H993 441 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 CHCHD3Q9NX63 227 aaKnown RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 LRRC42Q9Y546 428 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 PCDHB11Q9Y5F2 797 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 V9GY48 417 aaPredicted RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 TNKSO95271 1327 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 M0R2N6 131 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 LAD1O00515 517 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 TLR2O60603 784 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 PPFIA2O75334 1257 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 PLEKHA8P1O95397 391 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 ITGA4P13612 1032 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 CNGA1P29973 690 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 WEE1P30291 646 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 MCM7P33993 719 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 IFNAR2P48551 515 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 IFI35P80217 286 aaPredicted RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 LACTBP83111 547 aaPredicted RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 CCDC38Q502W7 563 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 RRP12Q5JTH9 1297 aaKnown RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 RNF220Q5VTB9 566 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 HHATQ5VTY9 493 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 OR52E8Q6IFG1 317 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 BPHLQ86WA6 291 aaPredicted RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 RBM12BQ8IXT5 1001 aaKnown RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 MAGEB6Q8N7X4 407 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 ACTRT1Q8TDG2 376 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 ZSCAN10Q96SZ4 725 aaPredicted RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 TRIM4Q9C037 500 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 DDX47Q9H0S4 455 aaKnown RBP6.61□□□□□ -1.35
CHD2-202ENST00000420239 GOLPH3Q9H4A6 298 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 SH3GLB2Q9NR46 395 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 KIF13BQ9NQT8 1826 aa6.61□□□□□ -1.35
CHD2-202ENST00000420239 NHSL1Q5SYE7 1610 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 MYH4Q9Y623 1939 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 PDLIM1O00151 329 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 KCNK3O14649 394 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 ZSCAN9O15535 394 aaPredicted RBP6.6□□□□□ -1.35
CHD2-202ENST00000420239 TTI1O43156 1089 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 PRKAB2O43741 272 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 IMPDH2P12268 514 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 SCG2P13521 617 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 GM2AP17900 193 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 CALML3P27482 149 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 ATP11AP98196 1134 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 CNGA2Q16280 664 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 PTPROQ16827 1216 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 PFKFB3Q16875 520 aaPredicted RBP6.6□□□□□ -1.35
CHD2-202ENST00000420239 KIAA0753Q2KHM9 967 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 ESCO1Q5FWF5 840 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 TMEM154Q6P9G4 183 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 CATIPQ7Z7H3 387 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 APLFQ8IW19 511 aaPredicted RBP6.6□□□□□ -1.35
CHD2-202ENST00000420239 LCORLQ8N3X6 602 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 ENAHQ8N8S7 591 aaPredicted RBP6.6□□□□□ -1.35
CHD2-202ENST00000420239 ZNF511Q8NB15 262 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 SLC17A8Q8NDX2 589 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 UCMAQ8WVF2 138 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 KIFAP3Q92845 792 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 AK8Q96MA6 479 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 PAIP2Q9BPZ3 127 aaKnown RBP6.6□□□□□ -1.35
CHD2-202ENST00000420239 TRIM51Q9BSJ1 452 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 TRIM9Q9C026 710 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 DPH5Q9H2P9 285 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 SEMA6BQ9H3T3 888 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 MMRN2Q9H8L6 949 aa6.6□□□□□ -1.35
CHD2-202ENST00000420239 LUC7LQ9NQ29 371 aaKnown RBP6.6□□□□□ -1.35
CHD2-202ENST00000420239 NOC2LQ9Y3T9 749 aaKnown RBP6.6□□□□□ -1.35
CHD2-202ENST00000420239 USP15Q9Y4E8 981 aaPredicted RBP6.6□□□□□ -1.35
CHD2-202ENST00000420239 CCDC88AQ3V6T2 1871 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms