RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 NCAPH2Q6IBW4 605 aa12.37□□□□□ -0.43
SSBP3-206ENST00000420121 PTCRAQ6ISU1 281 aaPredicted RBP12.37□□□□□ -0.43
SSBP3-206ENST00000420121 ZNF410Q86VK4 478 aa12.37□□□□□ -0.43
SSBP3-206ENST00000420121 RHPN2Q8IUC4 686 aa12.37□□□□□ -0.43
SSBP3-206ENST00000420121 SLFN12Q8IYM2 578 aa12.37□□□□□ -0.43
SSBP3-206ENST00000420121 COLGALT1Q8NBJ5 622 aa12.37□□□□□ -0.43
SSBP3-206ENST00000420121 NLRP7Q8WX94 980 aa12.37□□□□□ -0.43
SSBP3-206ENST00000420121 MTMR9Q96QG7 549 aa12.37□□□□□ -0.43
SSBP3-206ENST00000420121 TMEM117Q9H0C3 514 aa12.37□□□□□ -0.43
SSBP3-206ENST00000420121 ATP6V0A4Q9HBG4 840 aa12.37□□□□□ -0.43
SSBP3-206ENST00000420121 IFT122Q9HBG6 1241 aa12.37□□□□□ -0.43
SSBP3-206ENST00000420121 CLDND1Q9NY35 253 aa12.37□□□□□ -0.43
SSBP3-206ENST00000420121 EIF5BO60841 1220 aaKnown RBP12.36□□□□□ -0.43
SSBP3-206ENST00000420121 FGF18O76093 207 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 SLITRK3O94933 977 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 ZSCAN20P17040 1043 aaPredicted RBP12.36□□□□□ -0.43
SSBP3-206ENST00000420121 YWHABP31946 246 aaKnown RBP12.36□□□□□ -0.43
SSBP3-206ENST00000420121 ERVFC1P60507 584 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 CDC42EP1Q00587 391 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 ADAM15Q13444 863 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 CTTNQ14247 550 aaKnown RBP12.36□□□□□ -0.43
SSBP3-206ENST00000420121 CCDC83Q8IWF9 413 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 SPOCK2Q92563 424 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 MSLNLQ96KJ4 702 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 CEP170P1Q96L14 293 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 HSD17B14Q9BPX1 270 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 TRAIPQ9BWF2 469 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 GCOM2Q9BZD3 368 aaPredicted RBP12.36□□□□□ -0.43
SSBP3-206ENST00000420121 TMEM60Q9H2L4 133 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 MINDY3Q9H8M7 445 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 BRMS1Q9HCU9 246 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 XPNPEP1Q9NQW7 623 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 LIMCH1Q9UPQ0 1083 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 TRIOO75962 3097 aa12.36□□□□□ -0.43
SSBP3-206ENST00000420121 MEIS3P2A8K0S8 358 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 FSCN2O14926 492 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 NCK2O43639 380 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 DKC1O60832 514 aaKnown RBP eCLIP12.35□□□□□ -0.43
SSBP3-206ENST00000420121 LYPLA2O95372 231 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 GLP2RO95838 553 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 EOMESO95936 686 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 PBX3P40426 434 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 DNM2P50570 870 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 GUCY1B3Q02153 619 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 CYP4A11Q02928 519 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 UBE3AQ05086 875 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 PRPF31Q8WWY3 499 aaKnown RBP12.35□□□□□ -0.43
SSBP3-206ENST00000420121 TMEM143Q96AN5 459 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 NLRP4Q96MN2 994 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 SCLT1Q96NL6 688 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 EIF2AK1Q9BQI3 630 aaKnown RBP12.35□□□□□ -0.43
SSBP3-206ENST00000420121 EPHX3Q9H6B9 360 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 ZSWIM4Q9H7M6 989 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 CHST12Q9NRB3 414 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 BMP2KQ9NSY1 1161 aaPredicted RBP12.35□□□□□ -0.43
SSBP3-206ENST00000420121 CLEC1BQ9P126 229 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 PCDHA12Q9UN75 941 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 PPME1Q9Y570 386 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 PCDHB12Q9Y5F1 795 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 COL4A3BPQ9Y5P4 624 aa12.35□□□□□ -0.43
SSBP3-206ENST00000420121 HOXA2O43364 376 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 MBTPS2O43462 519 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 NEMFO60524 1076 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 BAG4O95429 457 aaKnown RBP12.34□□□□□ -0.43
SSBP3-206ENST00000420121 LAG3P18627 525 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 SFPQP23246 707 aaKnown RBP eCLIP12.34□□□□□ -0.43
SSBP3-206ENST00000420121 RFC5P40937 340 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 PHKA2P46019 1235 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 PLCB3Q01970 1234 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 EMC2Q15006 297 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 CALCRLQ16602 461 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 PUS10Q3MIT2 529 aaKnown RBP12.34□□□□□ -0.43
SSBP3-206ENST00000420121 KCNT2Q6UVM3 1135 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 LRRC43Q8N309 656 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 EFHBQ8N7U6 833 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 VN1R2Q8NFZ6 395 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 HELQQ8TDG4 1101 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 SLC7A3Q8WY07 619 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 LPPQ93052 612 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 JPH2Q9BR39 696 aaPredicted RBP12.34□□□□□ -0.43
SSBP3-206ENST00000420121 LLPHQ9BRT6 129 aaKnown RBP12.34□□□□□ -0.43
SSBP3-206ENST00000420121 IGFLR1Q9H665 355 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 TTC12Q9H892 705 aaPredicted RBP12.34□□□□□ -0.43
SSBP3-206ENST00000420121 C11orf16Q9NQ32 467 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 TLR9Q9NR96 1032 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 AAASQ9NRG9 546 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 AGPAT5Q9NUQ2 364 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 DACT1Q9NYF0 836 aa12.34□□□□□ -0.43
SSBP3-206ENST00000420121 TDRD15B5MCY1 1934 aaKnown RBP12.34□□□□□ -0.43
SSBP3-206ENST00000420121 POTEMA6NI47 508 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 C19orf67A6NJJ6 358 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 ZNF623O75123 536 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 SPATA31C1P0DKV0 1188 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 HOXA11P31270 313 aaPredicted RBP12.33□□□□□ -0.44
SSBP3-206ENST00000420121 TXKP42681 527 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 NRIP1P48552 1158 aa12.33□□□□□ -0.44
SSBP3-206ENST00000420121 RBM25P49756 843 aaKnown RBP12.33□□□□□ -0.44
SSBP3-206ENST00000420121 POLGP54098 1239 aaPredicted RBP12.33□□□□□ -0.44
SSBP3-206ENST00000420121 RBM10P98175 930 aaKnown RBP12.33□□□□□ -0.44
SSBP3-206ENST00000420121 ZP2Q05996 745 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms