RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 BARHL2Q9NY43 387 aa11.57□□□□□ -0.56
TNFAIP3-202ENST00000420009 LIMD1Q9UGP4 676 aa11.57□□□□□ -0.56
TNFAIP3-202ENST00000420009 IRAK3Q9Y616 596 aa11.57□□□□□ -0.56
TNFAIP3-202ENST00000420009 CACNA1AO00555 2505 aa11.57□□□□□ -0.56
TNFAIP3-202ENST00000420009 EVPLQ92817 2033 aa11.57□□□□□ -0.56
TNFAIP3-202ENST00000420009 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 SMCO2A6NFE2 343 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 CYP3A4P08684 503 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 DARSP14868 501 aaKnown RBP11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 EPCAMP16422 314 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 ZSCAN20P17040 1043 aaPredicted RBP11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 AOC1P19801 751 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 ZNF76P36508 570 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 METAP2P50579 478 aaKnown RBP eCLIP11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 GPC3P51654 580 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 SETQ01105 290 aaPredicted RBP11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 KANK3Q6NY19 840 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 LRRC71Q8N4P6 559 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 RNF169Q8NCN4 708 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 FEZF2Q8TBJ5 459 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 HELQQ8TDG4 1101 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 SLC22A17Q8WUG5 538 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 RSPH1Q8WYR4 309 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 TMEM169Q96HH4 297 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 FAM167AQ96KS9 214 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 MFSD1Q9H3U5 465 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 TBC1D22BQ9NU19 505 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 RBM28Q9NW13 759 aaKnown RBP11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 AKT3Q9Y243 479 aa11.56□□□□□ -0.56
TNFAIP3-202ENST00000420009 NT5C1B-RDH14C9J2C7 533 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 ZNF862O60290 1169 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 CXCL14O95715 111 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 PSAPP07602 524 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 CTSAP10619 480 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 NPR3P17342 541 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 ALDH7A1P49419 539 aaKnown RBP11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 POLGP54098 1239 aaPredicted RBP11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 BMS1Q14692 1282 aaKnown RBP11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 ATAT1Q5SQI0 421 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 CREB3L3Q68CJ9 461 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 EFCAB12Q6NXP0 572 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 CCDC105Q8IYK2 499 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 ADSSL1Q8N142 457 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 VPS52Q8N1B4 723 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 AUTS2Q8WXX7 1259 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 ZNF577Q9BSK1 485 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 KRTAP3-3Q9BYR6 98 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 KRTAP3-2Q9BYR7 98 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 CYP26B1Q9NR63 512 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 DACT1Q9NYF0 836 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 GABBR1Q9UBS5 961 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 DBR1Q9UK59 544 aaKnown RBP11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 PCDHA10Q9Y5I2 948 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 V9GY48 417 aaPredicted RBP11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 MYO10Q9HD67 2058 aa11.55□□□□□ -0.56
TNFAIP3-202ENST00000420009 DMXL1Q9Y485 3027 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 ADAMTS3O15072 1205 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 OATP04181 439 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 TMOD1P28289 359 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 ID4P47928 161 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 GIT2Q14161 759 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 NECTIN1Q15223 517 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 RTN1Q16799 776 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 JAKMIP3Q5VZ66 844 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 TMC5Q6UXY8 1006 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 SYNE3Q6ZMZ3 975 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 TRMT1LQ7Z2T5 733 aaKnown RBP11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 GPR149Q86SP6 731 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 DDX53Q86TM3 631 aaKnown RBP11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 FLCNQ8NFG4 579 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 BCL7CQ8WUZ0 217 aaPredicted RBP11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 LENG9Q96B70 501 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 IGSF21Q96ID5 467 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 ZNF668Q96K58 619 aaPredicted RBP11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 TRAIPQ9BWF2 469 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 SFXN1Q9H9B4 322 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 FAM217BQ9NTX9 383 aaPredicted RBP11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 DUSP12Q9UNI6 340 aa11.54□□□□□ -0.56
TNFAIP3-202ENST00000420009 ESYT2A0FGR8 921 aa11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 CARNS1A5YM72 827 aa11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 WDR64B1ANS9 1081 aa11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 ZBTB43O43298 467 aa11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 PI15O43692 258 aa11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 ZC3H11AO75152 810 aaKnown RBP eCLIP11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 FGFR4P22455 802 aa11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 CA8P35219 290 aa11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 PHKA2P46019 1235 aa11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 PRKCEQ02156 737 aa11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 TDGQ13569 410 aa11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 PTPN14Q15678 1187 aa11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 CCDC149Q6ZUS6 474 aa11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 CABP7Q86V35 215 aa11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 ACSF2Q96CM8 615 aaPredicted RBP11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 VN1R3Q9BXE9 311 aa11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 TCEAL9Q9UHQ7 104 aa11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 BRPF3Q9ULD4 1205 aa11.53□□□□□ -0.56
TNFAIP3-202ENST00000420009 MYH9P35579 1960 aaKnown RBP11.52□□□□□ -0.56
TNFAIP3-202ENST00000420009 GALTP07902 379 aa11.52□□□□□ -0.57
TNFAIP3-202ENST00000420009 CIITAP33076 1130 aa11.52□□□□□ -0.57
TNFAIP3-202ENST00000420009 EMP3P54852 163 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms