RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 TCF25Q9BQ70 676 aa19.42■□□□□ 0.7
PTCD1-202ENST00000419981 KCNJ14Q9UNX9 436 aa19.42■□□□□ 0.7
PTCD1-202ENST00000419981 MUC6Q6W4X9 2439 aa19.41■□□□□ 0.7
PTCD1-202ENST00000419981 DDX11L8A8MPP1 907 aa19.41■□□□□ 0.7
PTCD1-202ENST00000419981 SLC37A4O43826 429 aa19.41■□□□□ 0.7
PTCD1-202ENST00000419981 ATF7P17544 494 aaPredicted RBP19.41■□□□□ 0.7
PTCD1-202ENST00000419981 SFPQP23246 707 aaKnown RBP eCLIP19.41■□□□□ 0.7
PTCD1-202ENST00000419981 PBX3P40426 434 aa19.41■□□□□ 0.7
PTCD1-202ENST00000419981 PSMC5P62195 406 aa19.41■□□□□ 0.7
PTCD1-202ENST00000419981 RBM10P98175 930 aaKnown RBP19.41■□□□□ 0.7
PTCD1-202ENST00000419981 KRT17Q04695 432 aa19.41■□□□□ 0.7
PTCD1-202ENST00000419981 SCRN1Q12765 414 aa19.41■□□□□ 0.7
PTCD1-202ENST00000419981 VN1R2Q8NFZ6 395 aa19.41■□□□□ 0.7
PTCD1-202ENST00000419981 PHF20Q9BVI0 1012 aa19.41■□□□□ 0.7
PTCD1-202ENST00000419981 MRPL9Q9BYD2 267 aaKnown RBP19.41■□□□□ 0.7
PTCD1-202ENST00000419981 NGRNQ9NPE2 291 aaKnown RBP19.41■□□□□ 0.7
PTCD1-202ENST00000419981 CHST12Q9NRB3 414 aa19.41■□□□□ 0.7
PTCD1-202ENST00000419981 SPG21Q9NZD8 308 aa19.41■□□□□ 0.7
PTCD1-202ENST00000419981 STK36Q9NRP7 1315 aa19.41■□□□□ 0.7
PTCD1-202ENST00000419981 DENND4AQ7Z401 1863 aa19.41■□□□□ 0.7
PTCD1-202ENST00000419981 C2orf16Q68DN1 1984 aa19.41■□□□□ 0.7
PTCD1-202ENST00000419981 TRIOO75962 3097 aa19.4■□□□□ 0.7
PTCD1-202ENST00000419981 A0A087WZ62 844 aa19.4■□□□□ 0.7
PTCD1-202ENST00000419981 XBP1P17861 261 aa19.4■□□□□ 0.7
PTCD1-202ENST00000419981 HOXD11P31277 338 aaPredicted RBP19.4■□□□□ 0.7
PTCD1-202ENST00000419981 NEK8Q86SG6 692 aa19.4■□□□□ 0.7
PTCD1-202ENST00000419981 ZNF410Q86VK4 478 aa19.4■□□□□ 0.7
PTCD1-202ENST00000419981 RHPN2Q8IUC4 686 aa19.4■□□□□ 0.7
PTCD1-202ENST00000419981 JPH2Q9BR39 696 aaPredicted RBP19.4■□□□□ 0.7
PTCD1-202ENST00000419981 FDXACB1Q9BRP7 624 aaPredicted RBP19.4■□□□□ 0.7
PTCD1-202ENST00000419981 PHF7Q9BWX1 381 aaPredicted RBP19.4■□□□□ 0.7
PTCD1-202ENST00000419981 INO80BQ9C086 356 aaPredicted RBP19.4■□□□□ 0.7
PTCD1-202ENST00000419981 SLKQ9H2G2 1235 aaPredicted RBP19.4■□□□□ 0.7
PTCD1-202ENST00000419981 SUCLA2Q9P2R7 463 aaPredicted RBP19.4■□□□□ 0.7
PTCD1-202ENST00000419981 LOC730098B7Z3J9 87 aa19.39■□□□□ 0.69
PTCD1-202ENST00000419981 MAFO75444 373 aaPredicted RBP19.39■□□□□ 0.69
PTCD1-202ENST00000419981 GCFC2P16383 781 aaKnown RBP19.39■□□□□ 0.69
PTCD1-202ENST00000419981 PPP2R5CQ13362 524 aa19.39■□□□□ 0.69
PTCD1-202ENST00000419981 PLA2G4FQ68DD2 849 aa19.39■□□□□ 0.69
PTCD1-202ENST00000419981 TWF2Q6IBS0 349 aaKnown RBP19.39■□□□□ 0.69
PTCD1-202ENST00000419981 TMEM184AQ6ZMB5 413 aa19.39■□□□□ 0.69
PTCD1-202ENST00000419981 ANO5Q75V66 913 aa19.39■□□□□ 0.69
PTCD1-202ENST00000419981 TMC7Q7Z402 723 aa19.39■□□□□ 0.69
PTCD1-202ENST00000419981 SLC39A11Q8N1S5 342 aa19.39■□□□□ 0.69
PTCD1-202ENST00000419981 FAM20AQ96MK3 541 aa19.39■□□□□ 0.69
PTCD1-202ENST00000419981 NLRP4Q96MN2 994 aa19.39■□□□□ 0.69
PTCD1-202ENST00000419981 KCNMB3Q9NPA1 279 aa19.39■□□□□ 0.69
PTCD1-202ENST00000419981 HIDE1A8MVS5 230 aa19.38■□□□□ 0.69
PTCD1-202ENST00000419981 EML1O00423 815 aa19.38■□□□□ 0.69
PTCD1-202ENST00000419981 DKC1O60832 514 aaKnown RBP eCLIP19.38■□□□□ 0.69
PTCD1-202ENST00000419981 SKIP12755 728 aa19.38■□□□□ 0.69
PTCD1-202ENST00000419981 TECP42680 631 aa19.38■□□□□ 0.69
PTCD1-202ENST00000419981 PHKA2P46019 1235 aa19.38■□□□□ 0.69
PTCD1-202ENST00000419981 QARSP47897 775 aaKnown RBP19.38■□□□□ 0.69
PTCD1-202ENST00000419981 KCNC3Q14003 757 aa19.38■□□□□ 0.69
PTCD1-202ENST00000419981 SMC1AQ14683 1233 aaKnown RBP19.38■□□□□ 0.69
PTCD1-202ENST00000419981 PPP4R3AQ6IN85 833 aa19.38■□□□□ 0.69
PTCD1-202ENST00000419981 ANKRD54Q6NXT1 300 aa19.38■□□□□ 0.69
PTCD1-202ENST00000419981 HFE2Q6ZVN8 426 aa19.38■□□□□ 0.69
PTCD1-202ENST00000419981 RSPH1Q8WYR4 309 aa19.38■□□□□ 0.69
PTCD1-202ENST00000419981 SUSD6Q92537 303 aa19.38■□□□□ 0.69
PTCD1-202ENST00000419981 CYP26B1Q9NR63 512 aa19.38■□□□□ 0.69
PTCD1-202ENST00000419981 VAV3Q9UKW4 847 aa19.38■□□□□ 0.69
PTCD1-202ENST00000419981 PIN4Q9Y237 131 aaKnown RBP19.38■□□□□ 0.69
PTCD1-202ENST00000419981 MTCL1Q9Y4B5 1905 aaKnown RBP19.37■□□□□ 0.69
PTCD1-202ENST00000419981 CCNT1O60563 726 aaKnown RBP19.37■□□□□ 0.69
PTCD1-202ENST00000419981 PFKFB2O60825 505 aa19.37■□□□□ 0.69
PTCD1-202ENST00000419981 ALDH7A1P49419 539 aaKnown RBP19.37■□□□□ 0.69
PTCD1-202ENST00000419981 CBX2Q14781 532 aaPredicted RBP19.37■□□□□ 0.69
PTCD1-202ENST00000419981 LLGL2Q6P1M3 1020 aa19.37■□□□□ 0.69
PTCD1-202ENST00000419981 CATSPER4Q7RTX7 472 aa19.37■□□□□ 0.69
PTCD1-202ENST00000419981 SLC7A3Q8WY07 619 aa19.37■□□□□ 0.69
PTCD1-202ENST00000419981 EDAQ92838 391 aa19.37■□□□□ 0.69
PTCD1-202ENST00000419981 RPGRIP1Q96KN7 1286 aa19.37■□□□□ 0.69
PTCD1-202ENST00000419981 NAP1L4Q99733 375 aaKnown RBP19.37■□□□□ 0.69
PTCD1-202ENST00000419981 TRAIPQ9BWF2 469 aa19.37■□□□□ 0.69
PTCD1-202ENST00000419981 TPCN1Q9ULQ1 816 aa19.37■□□□□ 0.69
PTCD1-202ENST00000419981 PLXNA3P51805 1871 aa19.37■□□□□ 0.69
PTCD1-202ENST00000419981 ZC3H11AO75152 810 aaKnown RBP eCLIP19.36■□□□□ 0.69
PTCD1-202ENST00000419981 P4HBP07237 508 aaKnown RBP19.36■□□□□ 0.69
PTCD1-202ENST00000419981 RAB27AP51159 221 aa19.36■□□□□ 0.69
PTCD1-202ENST00000419981 NPEPPSP55786 919 aa19.36■□□□□ 0.69
PTCD1-202ENST00000419981 BCAR1P56945 870 aa19.36■□□□□ 0.69
PTCD1-202ENST00000419981 BMS1Q14692 1282 aaKnown RBP19.36■□□□□ 0.69
PTCD1-202ENST00000419981 PIK3AP1Q6ZUJ8 805 aa19.36■□□□□ 0.69
PTCD1-202ENST00000419981 KSR1Q8IVT5 923 aa19.36■□□□□ 0.69
PTCD1-202ENST00000419981 EXOC8Q8IYI6 725 aa19.36■□□□□ 0.69
PTCD1-202ENST00000419981 LPPQ93052 612 aa19.36■□□□□ 0.69
PTCD1-202ENST00000419981 TMEM169Q96HH4 297 aa19.36■□□□□ 0.69
PTCD1-202ENST00000419981 CEP170P1Q96L14 293 aa19.36■□□□□ 0.69
PTCD1-202ENST00000419981 KCNH6Q9H252 994 aa19.36■□□□□ 0.69
PTCD1-202ENST00000419981 FAM105AQ9NUU6 356 aa19.36■□□□□ 0.69
PTCD1-202ENST00000419981 PPME1Q9Y570 386 aa19.36■□□□□ 0.69
PTCD1-202ENST00000419981 COL4A3BPQ9Y5P4 624 aa19.36■□□□□ 0.69
PTCD1-202ENST00000419981 CARNS1A5YM72 827 aa19.35■□□□□ 0.69
PTCD1-202ENST00000419981 NT5C1B-RDH14C9J2C7 533 aa19.35■□□□□ 0.69
PTCD1-202ENST00000419981 TBX3O15119 743 aa19.35■□□□□ 0.69
PTCD1-202ENST00000419981 MARCH6O60337 910 aa19.35■□□□□ 0.69
PTCD1-202ENST00000419981 NEFLP07196 543 aa19.35■□□□□ 0.69
PTCD1-202ENST00000419981 HOXB8P17481 243 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms