RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 PPM1GO15355 546 aaPredicted RBP3.55□□□□□ -1.84
VPS41-206ENST00000418457 NRP2O60462 931 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 B4GALT3O60512 393 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 B4GALT4O60513 344 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 H2AFYO75367 372 aaKnown RBP3.55□□□□□ -1.84
VPS41-206ENST00000418457 MT-CO1P00395 513 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 CFBP00751 764 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 PDGFRBP09619 1106 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 MYBL2P10244 700 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 MTHFD2P13995 350 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 IARSP41252 1262 aaKnown RBP3.55□□□□□ -1.84
VPS41-206ENST00000418457 GPR3P46089 330 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 MRE11P49959 708 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 LGALS4P56470 323 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 MRPS9P82933 396 aaKnown RBP3.55□□□□□ -1.84
VPS41-206ENST00000418457 SPIDRQ14159 915 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 TRIM25Q14258 630 aaKnown RBP3.55□□□□□ -1.84
VPS41-206ENST00000418457 MAN2A1Q16706 1144 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 ZNF827Q17R98 1081 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 ABCB5Q2M3G0 1257 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 CCDC178Q5BJE1 867 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 TOR2AQ5JU69 321 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 LARP4Q71RC2 724 aaKnown RBP eCLIP3.55□□□□□ -1.84
VPS41-206ENST00000418457 PLEKHH3Q7Z736 793 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 AMOTL1Q8IY63 956 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 ZDHHC14Q8IZN3 488 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 LGI4Q8N135 537 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 CBARPQ8N350 705 aaPredicted RBP3.55□□□□□ -1.84
VPS41-206ENST00000418457 OR14C36Q8NHC7 312 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 FEZF2Q8TBJ5 459 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 STAG1Q8WVM7 1258 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 AUTS2Q8WXX7 1259 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 GFM2Q969S9 779 aaKnown RBP3.55□□□□□ -1.84
VPS41-206ENST00000418457 WDR92Q96MX6 357 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 ORAI2Q96SN7 254 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 SMAD5Q99717 465 aaKnown RBP3.55□□□□□ -1.84
VPS41-206ENST00000418457 ASPSCR1Q9BZE9 553 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 KIAA1683Q9H0B3 1180 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 QRSL1Q9H0R6 528 aaKnown RBP3.55□□□□□ -1.84
VPS41-206ENST00000418457 CCM2LQ9NUG4 571 aaPredicted RBP3.55□□□□□ -1.84
VPS41-206ENST00000418457 DNAJC28Q9NX36 388 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 MKS1Q9NXB0 559 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 PRSS50Q9UI38 385 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 TMPRSS11EQ9UL52 423 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 PTPN22Q9Y2R2 807 aa3.55□□□□□ -1.84
VPS41-206ENST00000418457 CECR2Q9BXF3 1484 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 TNIKQ9UKE5 1360 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 SHTN1A0MZ66 631 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 OTOL1A6NHN0 477 aaPredicted RBP3.54□□□□□ -1.84
VPS41-206ENST00000418457 DAPK3O43293 454 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 FSBPO95073 299 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 CELA3BP08861 270 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 NRG3P56975 720 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 SRSF2Q01130 221 aaKnown RBP3.54□□□□□ -1.84
VPS41-206ENST00000418457 ADAM15Q13444 863 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 SURF1Q15526 300 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 CLUL1Q15846 466 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 INAVAQ3KP66 663 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 AGBL4Q5VU57 503 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 PGM2L1Q6PCE3 622 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 LMBR1LQ6UX01 489 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 ARHGEF18Q6ZSZ5 1173 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 USP30Q70CQ3 517 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 LYSMD2Q8IV50 215 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 SLC41A1Q8IVJ1 513 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 GLB1L2Q8IW92 636 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 C1orf162Q8NEQ5 155 aaPredicted RBP3.54□□□□□ -1.84
VPS41-206ENST00000418457 LPPQ93052 612 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 NKD2Q969F2 451 aaPredicted RBP3.54□□□□□ -1.84
VPS41-206ENST00000418457 OSBPL6Q9BZF3 934 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 OR10A2Q9H208 303 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 PRDM12Q9H4Q4 367 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 PARD6AQ9NPB6 346 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.54□□□□□ -1.84
VPS41-206ENST00000418457 DPP7Q9UHL4 492 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 EVLQ9UI08 416 aaPredicted RBP3.54□□□□□ -1.84
VPS41-206ENST00000418457 INVSQ9Y283 1065 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 SPEF1Q9Y4P9 236 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 CDY2AQ9Y6F7 541 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 SLC4A7Q9Y6M7 1214 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 WIZO95785 1651 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 MROH2BQ7Z745 1585 aa3.54□□□□□ -1.84
VPS41-206ENST00000418457 TOP2AP11388 1531 aaKnown RBP3.54□□□□□ -1.84
VPS41-206ENST00000418457 TNKSO95271 1327 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 A0A0A6YYK5 440 aaPredicted RBP3.53□□□□□ -1.84
VPS41-206ENST00000418457 TRIM75PA6NK02 468 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 ARHGAP6O43182 974 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 SEC24DO94855 1032 aaPredicted RBP3.53□□□□□ -1.84
VPS41-206ENST00000418457 OSMP13725 252 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 HNRNPLP14866 589 aaKnown RBP eCLIP3.53□□□□□ -1.84
VPS41-206ENST00000418457 CCND1P24385 295 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 CNR2P34972 360 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 SLC5A3P53794 718 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 PPP2CBP62714 309 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 PPP2CAP67775 309 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 CDK17Q00537 523 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 MGAT5Q09328 741 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 PTPN21Q16825 1174 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 MUM1Q2TAK8 710 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 GAREM2Q75VX8 874 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms