RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 TTLL11Q8NHH1 800 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 POLR3FQ9H1D9 316 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-205ENST00000418258 KIF17Q9P2E2 1029 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 UTYO14607 1347 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 A0A087WWV3 80 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 UBA6A0AVT1 1052 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-205ENST00000418258 E2F6O75461 281 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 TADA2AO75478 443 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 POU5F1BQ06416 359 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 RCSD1Q6JBY9 416 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 KRT80Q6KB66 452 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 PODNQ7Z5L7 613 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 SCG3Q8WXD2 468 aaKnown RBP11.96□□□□□ -0.49
PTCH1-205ENST00000418258 CYP26B1Q9NR63 512 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 FAM217BQ9NTX9 383 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-205ENST00000418258 LUC7L3O95232 432 aaKnown RBP11.96□□□□□ -0.49
PTCH1-205ENST00000418258 HOXA7P31268 230 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-205ENST00000418258 GCLMP48507 274 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 SSTR3P32745 418 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-205ENST00000418258 KRT76Q01546 638 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 ARL6IP4Q66PJ3 421 aaKnown RBP11.96□□□□□ -0.49
PTCH1-205ENST00000418258 TMEM35BQ8NCS4 154 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 SRPK1Q96SB4 655 aaKnown RBP11.96□□□□□ -0.49
PTCH1-205ENST00000418258 BCL2L12Q9HB09 334 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 CD209Q9NNX6 404 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 FGFR1OP2Q9NVK5 253 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 NARFQ9UHQ1 456 aa11.96□□□□□ -0.49
PTCH1-205ENST00000418258 ARHGEF5Q12774 1597 aa11.96□□□□□ -0.5
PTCH1-205ENST00000418258 TBXAS1P24557 533 aaPredicted RBP11.96□□□□□ -0.5
PTCH1-205ENST00000418258 CCT5P48643 541 aa11.96□□□□□ -0.5
PTCH1-205ENST00000418258 ZNF157P51786 506 aaPredicted RBP11.96□□□□□ -0.5
PTCH1-205ENST00000418258 TAS2R42Q7RTR8 314 aa11.96□□□□□ -0.5
PTCH1-205ENST00000418258 MTIF3Q9H2K0 278 aaKnown RBP11.96□□□□□ -0.5
PTCH1-205ENST00000418258 ACAD9Q9H845 621 aa11.96□□□□□ -0.5
PTCH1-205ENST00000418258 POTEMA6NI47 508 aa11.96□□□□□ -0.5
PTCH1-205ENST00000418258 SRGAP2O75044 1071 aa11.96□□□□□ -0.5
PTCH1-205ENST00000418258 LCP1P13796 627 aa11.96□□□□□ -0.5
PTCH1-205ENST00000418258 GNA15P30679 374 aa11.96□□□□□ -0.5
PTCH1-205ENST00000418258 SFNP31947 248 aa11.96□□□□□ -0.5
PTCH1-205ENST00000418258 FAM133BQ5BKY9 247 aaKnown RBP11.96□□□□□ -0.5
PTCH1-205ENST00000418258 RHOT2Q8IXI1 618 aa11.96□□□□□ -0.5
PTCH1-205ENST00000418258 XXYLT1Q8NBI6 393 aa11.96□□□□□ -0.5
PTCH1-205ENST00000418258 ADGRL2O95490 1459 aa11.96□□□□□ -0.5
PTCH1-205ENST00000418258 CFAP69A5D8W1 941 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 RAD51Q06609 339 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 DYDC2Q96IM9 177 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 STAP1Q9ULZ2 295 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 CYP2E1P05181 493 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-205ENST00000418258 PRDX5P30044 214 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 LIG3P49916 1009 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 PRAMEP78395 509 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 TRIM54Q9BYV2 358 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 CCNE1P24864 410 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 QARSP47897 775 aaKnown RBP11.95□□□□□ -0.5
PTCH1-205ENST00000418258 SH3BGRP55822 239 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-205ENST00000418258 HSP90AA5PQ58FG0 334 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 TRPV6Q9H1D0 765 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 SAYSD1Q9NPB0 183 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 QRICH2Q9H0J4 1663 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 IGSF1Q8N6C5 1336 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 CYBBP04839 570 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 COPS2P61201 443 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 NAALADL2Q58DX5 795 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 TADA2BQ86TJ2 420 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 ADGRF4Q8IZF3 695 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 ZC3H15Q8WU90 426 aaKnown RBP11.95□□□□□ -0.5
PTCH1-205ENST00000418258 RBM41Q96IZ5 413 aaKnown RBP11.95□□□□□ -0.5
PTCH1-205ENST00000418258 CNOT8Q9UFF9 292 aaKnown RBP11.95□□□□□ -0.5
PTCH1-205ENST00000418258 RASGRF2O14827 1237 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 ZRANB2O95218 330 aaKnown RBP eCLIP11.95□□□□□ -0.5
PTCH1-205ENST00000418258 KITP10721 976 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 PTPN12Q05209 780 aaKnown RBP11.95□□□□□ -0.5
PTCH1-205ENST00000418258 BTBD8Q5XKL5 378 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 SPATA2LQ8IUW3 424 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-205ENST00000418258 AIFM3Q96NN9 605 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 EPAS1Q99814 870 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 ELP3Q9H9T3 547 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 NRBP1Q9UHY1 535 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 DNAJC12Q9UKB3 198 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 PTCH1Q13635 1447 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 DISP1Q96F81 1524 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 KRT39Q6A163 491 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 RMDN1Q96DB5 314 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 VAMP7P51809 220 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 TTC17Q96AE7 1141 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 BRIP1Q9BX63 1249 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 HEMGNQ9BXL5 484 aa11.95□□□□□ -0.5
PTCH1-205ENST00000418258 PIN4Q9Y237 131 aaKnown RBP11.95□□□□□ -0.5
PTCH1-205ENST00000418258 CROCC2H7BZ55 1655 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 NR3C1P04150 777 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 ARL4DP49703 201 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 ZBED6P86452 979 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 RASSF3Q86WH2 238 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 RABGGTAQ92696 567 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 DCUN1D1Q96GG9 259 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 CENPKQ9BS16 269 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 TUBB6Q9BUF5 446 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 TRIM62Q9BVG3 475 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 TXLNGQ9NUQ3 528 aa11.94□□□□□ -0.5
PTCH1-205ENST00000418258 PACSIN2Q9UNF0 486 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms