RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 UBL4BQ8N7F7 174 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 PCIF1Q9H4Z3 704 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 UBE2TQ9NPD8 197 aaPredicted RBP12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 DIS3Q9Y2L1 958 aaKnown RBP12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 TMEM110-MUSTN1A8MSY1 372 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 E7EVH7 732 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 OPLAHO14841 1288 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 TTI1O43156 1089 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 HIP1RO75146 1068 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 APBA3O96018 575 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 LSP1P33241 339 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 HSD17B3P37058 310 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 LIG3P49916 1009 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 DHX9Q08211 1270 aaKnown RBP12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 INTS8Q75QN2 995 aaKnown RBP12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 TADA2BQ86TJ2 420 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 CD302Q8IX05 232 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 SUPT20HQ8NEM7 779 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 BBXQ8WY36 941 aaPredicted RBP12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 SLC5A5Q92911 643 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 TMEM206Q9H813 350 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 TMEM51Q9NW97 253 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 TMEM59LQ9UK28 342 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 AJAP1Q9UKB5 411 aaPredicted RBP12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 LY75O60449 1722 aa12.68□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 PPP1R37O75864 691 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 MUTP22033 750 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 KRT71Q3SY84 523 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 RNF187Q5TA31 235 aaPredicted RBP12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 PADI6Q6TGC4 694 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 LRIG3Q6UXM1 1119 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 FAM160B2Q86V87 743 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 PPANQ9NQ55 473 aaKnown RBP12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 SYNPO2Q9UMS6 1093 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 TMX2Q9Y320 296 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 FRMPD4Q14CM0 1322 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ITGA4P13612 1032 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 RFX1P22670 979 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 PPARDQ03181 441 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 CBWD6Q4V339 395 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 CBWD3Q5JTY5 395 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 CBWD5Q5RIA9 395 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 SPATS2Q86XZ4 545 aaKnown RBP12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 RHOT2Q8IXI1 618 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 UNC45AQ9H3U1 944 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ANKRD62A6NC57 917 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ARP10275 920 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 FMO2Q99518 471 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 CCPG1Q9ULG6 757 aa12.67□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 DR1Q01658 176 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 BIRC3Q13489 604 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 LDHDQ86WU2 507 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 OR2W6PQ8NHA6 318 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 LNX1Q8TBB1 728 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 NEK9Q8TD19 979 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 VTI1AQ96AJ9 217 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 EPN3Q9H201 632 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 DAAM1Q9Y4D1 1078 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 MDH1P40925 334 aaKnown RBP12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 JAG1P78504 1218 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 NFIL3Q16649 462 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ACCSQ96QU6 501 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 CELF4Q9BZC1 486 aaKnown RBP12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ATP8A1Q9Y2Q0 1164 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 THSD7AQ9UPZ6 1657 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ALCAMQ13740 583 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 SLFN11Q7Z7L1 901 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 CPXCR1Q8N123 301 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 HES6Q96HZ4 224 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 THAP2Q9H0W7 228 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 CARD9Q9H257 536 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 EMSYQ7Z589 1322 aa12.66□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 GRIN2DO15399 1336 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ATP8B3O60423 1300 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 FOXN3O00409 490 aaPredicted RBP12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 VIL1P09327 827 aaKnown RBP12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 GUCY2CP25092 1073 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 CHRNA5P30532 468 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 GCLMP48507 274 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 VAMP7P51809 220 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 ZNF211Q13398 564 aaPredicted RBP12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 SEL1L2Q5TEA6 688 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 STYK1Q6J9G0 422 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 MIGA2Q7L4E1 593 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 RIT2Q99578 217 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 AGPAT1Q99943 283 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 TAOK3Q9H2K8 898 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 VCPKMTQ9H867 229 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 PPP1R9AQ9ULJ8 1098 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 FTLP02792 175 aaPredicted RBP12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 P4HBP07237 508 aaKnown RBP12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 PPM1KQ8N3J5 372 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 TMBIM4Q9HC24 238 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 DPY19L2P1Q6NXN4 242 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 RASGEF1CQ8N431 466 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 XXYLT1Q8NBI6 393 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 BORCS6Q96GS4 357 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 IWS1Q96ST2 819 aa12.65□□□□□ -0.38
CSPG4P3Y-201ENST00000418188 FEM1BQ9UK73 627 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms