RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 RTP3Q9BQQ7 232 aa8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 EP300Q09472 2414 aaPredicted RBP8.89□□□□□ -0.99
HLA-DPA1-241ENST00000417724 SPDYE4A6NLX3 237 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 WDR64B1ANS9 1081 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ZC3H11AO75152 810 aaKnown RBP eCLIP8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CTSAP10619 480 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 EPCAMP16422 314 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 AOC1P19801 751 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 DNM2P50570 870 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 GPC3P51654 580 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 RNASELQ05823 741 aaKnown RBP8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 TBC1D8BQ0IIM8 1120 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 COL9A3Q14050 684 aaPredicted RBP8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 NECTIN1Q15223 517 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 PRR16Q569H4 304 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 RNF20Q5VTR2 975 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CREB3L3Q68CJ9 461 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 GLB1LQ6UWU2 654 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 TMC5Q6UXY8 1006 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 GPR149Q86SP6 731 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 LRRC71Q8N4P6 559 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 LINC01465Q8N7H1 131 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 NLRP7Q8WX94 980 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 IGSF21Q96ID5 467 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ZNF668Q96K58 619 aaPredicted RBP8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 TRAIPQ9BWF2 469 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 GCOM2Q9BZD3 368 aaPredicted RBP8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 LSG1Q9H089 658 aaKnown RBP8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ZBP1Q9H171 429 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 SEMA4AQ9H3S1 761 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 C6orf50Q9HD87 102 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 STK39Q9UEW8 545 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 FBXL21Q9UKT6 434 aa8.88□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ESYT2A0FGR8 921 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 PI15O43692 258 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 OATP04181 439 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 GALTP07902 379 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 NPR3P17342 541 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 FGFR4P22455 802 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 KLRC2P26717 231 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 GNA11P29992 359 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 SFNP31947 248 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 PHKA2P46019 1235 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ANGPT1Q15389 498 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 NOMO2Q5JPE7 1267 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 TWF2Q6IBS0 349 aaKnown RBP8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CCDC149Q6ZUS6 474 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CCDC105Q8IYK2 499 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 REXO1Q8N1G1 1221 aaKnown RBP8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 DTWD2Q8NBA8 298 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 KCNG4Q8TDN1 519 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CCDC12Q8WUD4 166 aaPredicted RBP8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 AUTS2Q8WXX7 1259 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 EMILIN2Q9BXX0 1053 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 INO80BQ9C086 356 aaPredicted RBP8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ZMYND12Q9H0C1 365 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 SFXN1Q9H9B4 322 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 KCNK12Q9HB15 430 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 DISC1Q9NRI5 854 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 IGSF9Q9P2J2 1179 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 BRPF3Q9ULD4 1205 aa8.87□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CCDC196A0A1B0GTZ2 297 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 GOLGA8AA7E2F4 631 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 GOLGA8BA8MQT2 603 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 STK25O00506 426 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ZNF862O60290 1169 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ZNF623O75123 536 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CSDE1O75534 798 aaKnown RBP8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ALDH2P05091 517 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 SFPQP23246 707 aaKnown RBP eCLIP8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CIITAP33076 1130 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 RAB27AP51159 221 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 JAK3P52333 1124 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 RCAN1P53805 252 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 EXOSC10Q01780 885 aaKnown RBP8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 PRKCEQ02156 737 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 NONOQ15233 471 aaKnown RBP eCLIP8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 PFKFB3Q16875 520 aaPredicted RBP8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 LETM2Q2VYF4 491 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 CWF19L1Q69YN2 538 aaKnown RBP8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ELMSAN1Q6PJG2 1045 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 C15orf39Q6ZRI6 1047 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 DHX32Q7L7V1 743 aaKnown RBP8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 TMEM173Q86WV6 379 aaPredicted RBP8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 SIX5Q8N196 739 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 BICD2Q8TD16 824 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 RIT2Q99578 217 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ESYT1Q9BSJ8 1104 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 NRDE2Q9H7Z3 1164 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 ANO2Q9NQ90 1003 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 TBC1D13Q9NVG8 400 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 WNT16Q9UBV4 365 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 DPP7Q9UHL4 492 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 DUSP12Q9UNI6 340 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 INPP5FQ9Y2H2 1132 aa8.86□□□□□ -0.99
HLA-DPA1-241ENST00000417724 DENND4AQ7Z401 1863 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 C2orf16Q68DN1 1984 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 KLF18A0A0U1RQI7 1052 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 GAS7O60861 476 aa8.85□□□□□ -0.99
HLA-DPA1-241ENST00000417724 OFD1O75665 1012 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms