RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 NME8Q8N427 588 aa11.41□□□□□ -0.58
HDLBP-206ENST00000417540 NEK9Q8TD19 979 aa11.41□□□□□ -0.58
HDLBP-206ENST00000417540 TNPO1Q92973 898 aaKnown RBP11.41□□□□□ -0.58
HDLBP-206ENST00000417540 MMTAG2Q9BU76 263 aaKnown RBP11.41□□□□□ -0.58
HDLBP-206ENST00000417540 POLR3FQ9H1D9 316 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-206ENST00000417540 ATP6V0A4Q9HBG4 840 aa11.41□□□□□ -0.58
HDLBP-206ENST00000417540 RGS18Q9NS28 235 aa11.41□□□□□ -0.58
HDLBP-206ENST00000417540 NOL7Q9UMY1 257 aaKnown RBP11.41□□□□□ -0.58
HDLBP-206ENST00000417540 PCDHA12Q9UN75 941 aa11.41□□□□□ -0.58
HDLBP-206ENST00000417540 USP20Q9Y2K6 914 aa11.41□□□□□ -0.58
HDLBP-206ENST00000417540 SQORQ9Y6N5 450 aa11.41□□□□□ -0.58
HDLBP-206ENST00000417540 TTLL13PA6NNM8 815 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 H3BQV1 296 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 LYPLA2O95372 231 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 BAG4O95429 457 aaKnown RBP11.4□□□□□ -0.58
HDLBP-206ENST00000417540 RPLP2P05387 115 aaKnown RBP11.4□□□□□ -0.58
HDLBP-206ENST00000417540 GLRA2P23416 452 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 TMOD1P28289 359 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 GTF2F1P35269 517 aaKnown RBP eCLIP11.4□□□□□ -0.581e-7■■■■□ 24.6
HDLBP-206ENST00000417540 IRS1P35568 1242 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 FXR2P51116 673 aaKnown RBP eCLIP11.4□□□□□ -0.587e-7■□□□□ 10.9
HDLBP-206ENST00000417540 KCNQ1P51787 676 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 LAMTOR4Q0VGL1 99 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 RESTQ13127 1097 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 LRRC55Q6ZSA7 311 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 ADGRD2Q7Z7M1 963 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 ZNF598Q86UK7 904 aaKnown RBP11.4□□□□□ -0.58
HDLBP-206ENST00000417540 TMEM173Q86WV6 379 aaPredicted RBP11.4□□□□□ -0.58
HDLBP-206ENST00000417540 ECHDC2Q86YB7 292 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 FIBCD1Q8N539 461 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 RNF149Q8NC42 400 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 HELQQ8TDG4 1101 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 SNX29Q8TEQ0 813 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 PRPF31Q8WWY3 499 aaKnown RBP11.4□□□□□ -0.58
HDLBP-206ENST00000417540 SLC7A3Q8WY07 619 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 CPB2Q96IY4 423 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 NECAB3Q96P71 396 aaPredicted RBP11.4□□□□□ -0.58
HDLBP-206ENST00000417540 FTHL17Q9BXU8 183 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 AGPAT5Q9NUQ2 364 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 THEGQ9P2T0 379 aa11.4□□□□□ -0.58
HDLBP-206ENST00000417540 TRIOO75962 3097 aa11.39□□□□□ -0.59
HDLBP-206ENST00000417540 K7ELQ4 463 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-206ENST00000417540 TSPAN1O60635 241 aa11.39□□□□□ -0.59
HDLBP-206ENST00000417540 ITGB1P05556 798 aa11.39□□□□□ -0.59
HDLBP-206ENST00000417540 SRGAP2CP0DJJ0 459 aa11.39□□□□□ -0.59
HDLBP-206ENST00000417540 CCT6AP40227 531 aaKnown RBP11.39□□□□□ -0.59
HDLBP-206ENST00000417540 RFC5P40937 340 aa11.39□□□□□ -0.59
HDLBP-206ENST00000417540 TRAPPC10P48553 1259 aa11.39□□□□□ -0.59
HDLBP-206ENST00000417540 AFF1P51825 1210 aaKnown RBP11.39□□□□□ -0.59
HDLBP-206ENST00000417540 ATP2C1P98194 919 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-206ENST00000417540 MBTD1Q05BQ5 628 aa11.39□□□□□ -0.59
HDLBP-206ENST00000417540 GPM6BQ13491 265 aa11.39□□□□□ -0.59
HDLBP-206ENST00000417540 CAMK1Q14012 370 aa11.39□□□□□ -0.59
HDLBP-206ENST00000417540 SKIV2LQ15477 1246 aaKnown RBP11.39□□□□□ -0.59
HDLBP-206ENST00000417540 AMHR2Q16671 573 aa11.39□□□□□ -0.59
HDLBP-206ENST00000417540 UBXN11Q5T124 520 aa11.39□□□□□ -0.59
HDLBP-206ENST00000417540 CMTR2Q8IYT2 770 aaKnown RBP11.39□□□□□ -0.59
HDLBP-206ENST00000417540 BCL7CQ8WUZ0 217 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-206ENST00000417540 PSPC1Q8WXF1 523 aaKnown RBP11.39□□□□□ -0.59
HDLBP-206ENST00000417540 CLP1Q92989 425 aaKnown RBP11.39□□□□□ -0.59
HDLBP-206ENST00000417540 CCDC43Q96MW1 224 aaKnown RBP11.39□□□□□ -0.59
HDLBP-206ENST00000417540 CASD1Q96PB1 797 aa11.39□□□□□ -0.59
HDLBP-206ENST00000417540 PNMA5Q96PV4 448 aa11.39□□□□□ -0.59
HDLBP-206ENST00000417540 RUSC1Q9BVN2 902 aa11.39□□□□□ -0.59
HDLBP-206ENST00000417540 EIF2AQ9BY44 585 aaKnown RBP11.39□□□□□ -0.59
HDLBP-206ENST00000417540 CWH43Q9H720 699 aa11.39□□□□□ -0.59
HDLBP-206ENST00000417540 ALG13Q9NP73 1137 aaKnown RBP11.39□□□□□ -0.59
HDLBP-206ENST00000417540 DDX19AQ9NUU7 478 aaKnown RBP11.39□□□□□ -0.59
HDLBP-206ENST00000417540 VWA8A3KMH1 1905 aa11.39□□□□□ -0.59
HDLBP-206ENST00000417540 DENND4AQ7Z401 1863 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 TSC2P49815 1807 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 VWA3AA6NCI4 1184 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 E9PMD0 336 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 GPR182O15218 404 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 SFPQP23246 707 aaKnown RBP eCLIP11.38□□□□□ -0.591e-6■■□□□ 12
HDLBP-206ENST00000417540 MCM2P49736 904 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 RBM10P98175 930 aaKnown RBP11.38□□□□□ -0.59
HDLBP-206ENST00000417540 TCEAL5Q5H9L2 206 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 CATSPER4Q7RTX7 472 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 ZNF410Q86VK4 478 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 IGSF22Q8N9C0 903 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 PLIN2Q99541 437 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 POLR3CQ9BUI4 534 aaPredicted RBP11.38□□□□□ -0.59
HDLBP-206ENST00000417540 GCOM2Q9BZD3 368 aaPredicted RBP11.38□□□□□ -0.59
HDLBP-206ENST00000417540 NXF3Q9H4D5 531 aaKnown RBP11.38□□□□□ -0.59
HDLBP-206ENST00000417540 TUFT1Q9NNX1 390 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 C1orf112Q9NSG2 853 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 CACNG4Q9UBN1 327 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 LRFN2Q9ULH4 789 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 INPP5FQ9Y2H2 1132 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 ANK1P16157 1881 aa11.38□□□□□ -0.59
HDLBP-206ENST00000417540 C2orf16Q68DN1 1984 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 C5orf67F2Z3F1 127 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 F8W810 466 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 H3BNC9 293 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 TNFRSF10AO00220 468 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 LINC01565O15544 149 aa11.37□□□□□ -0.59
HDLBP-206ENST00000417540 GTPBP6O43824 516 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-206ENST00000417540 HOXA11P31270 313 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-206ENST00000417540 ARL2P36404 184 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms