RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 NSUN7Q8NE18 718 aaKnown RBP20.63■□□□□ 0.89
VPS16-204ENST00000417508 TNFRSF25Q93038 417 aa20.63■□□□□ 0.89
VPS16-204ENST00000417508 CDCA3Q99618 268 aaPredicted RBP20.63■□□□□ 0.89
VPS16-204ENST00000417508 FDXACB1Q9BRP7 624 aaPredicted RBP20.63■□□□□ 0.89
VPS16-204ENST00000417508 ZSWIM4Q9H7M6 989 aa20.63■□□□□ 0.89
VPS16-204ENST00000417508 RNF19AQ9NV58 838 aa20.63■□□□□ 0.89
VPS16-204ENST00000417508 CD207Q9UJ71 328 aa20.63■□□□□ 0.89
VPS16-204ENST00000417508 PLXNA4Q9HCM2 1894 aa20.62■□□□□ 0.89
VPS16-204ENST00000417508 ASAP2O43150 1006 aa20.62■□□□□ 0.89
VPS16-204ENST00000417508 GPR37L1O60883 481 aa20.62■□□□□ 0.89
VPS16-204ENST00000417508 GTF2F1P35269 517 aaKnown RBP eCLIP20.62■□□□□ 0.89
VPS16-204ENST00000417508 IRS1P35568 1242 aa20.62■□□□□ 0.89
VPS16-204ENST00000417508 KRT17Q04695 432 aa20.62■□□□□ 0.89
VPS16-204ENST00000417508 DLX2Q07687 328 aaPredicted RBP20.62■□□□□ 0.89
VPS16-204ENST00000417508 NR5A1Q13285 461 aa20.62■□□□□ 0.89
VPS16-204ENST00000417508 SMAD4Q13485 552 aaKnown RBP20.62■□□□□ 0.89
VPS16-204ENST00000417508 EARS2Q5JPH6 523 aaKnown RBP20.62■□□□□ 0.89
VPS16-204ENST00000417508 KCNT2Q6UVM3 1135 aa20.62■□□□□ 0.89
VPS16-204ENST00000417508 ADHFE1Q8IWW8 467 aa20.62■□□□□ 0.89
VPS16-204ENST00000417508 CEP170P1Q96L14 293 aa20.62■□□□□ 0.89
VPS16-204ENST00000417508 ZNF558Q96NG5 402 aa20.62■□□□□ 0.89
VPS16-204ENST00000417508 SH2D3AQ9BRG2 576 aa20.62■□□□□ 0.89
VPS16-204ENST00000417508 MRPL9Q9BYD2 267 aaKnown RBP20.62■□□□□ 0.89
VPS16-204ENST00000417508 DHX33Q9H6R0 707 aaKnown RBP20.62■□□□□ 0.89
VPS16-204ENST00000417508 TLE6Q9H808 572 aa20.62■□□□□ 0.89
VPS16-204ENST00000417508 C19orf67A6NJJ6 358 aa20.61■□□□□ 0.89
VPS16-204ENST00000417508 MBTPS2O43462 519 aa20.61■□□□□ 0.89
VPS16-204ENST00000417508 EYA4O95677 639 aa20.61■□□□□ 0.89
VPS16-204ENST00000417508 ALADP13716 330 aa20.61■□□□□ 0.89
VPS16-204ENST00000417508 FGFR4P22455 802 aa20.61■□□□□ 0.89
VPS16-204ENST00000417508 NRIP1P48552 1158 aa20.61■□□□□ 0.89
VPS16-204ENST00000417508 NDUFV1P49821 464 aa20.61■□□□□ 0.89
VPS16-204ENST00000417508 NPEPPSP55786 919 aa20.61■□□□□ 0.89
VPS16-204ENST00000417508 LRRC55Q6ZSA7 311 aa20.61■□□□□ 0.89
VPS16-204ENST00000417508 POTEDQ86YR6 584 aa20.61■□□□□ 0.89
VPS16-204ENST00000417508 TCP11Q8WWU5 503 aa20.61■□□□□ 0.89
VPS16-204ENST00000417508 MRPS27Q92552 414 aaKnown RBP20.61■□□□□ 0.89
VPS16-204ENST00000417508 POP1Q99575 1024 aaKnown RBP20.61■□□□□ 0.89
VPS16-204ENST00000417508 LXNQ9BS40 222 aa20.61■□□□□ 0.89
VPS16-204ENST00000417508 PCDHA12Q9UN75 941 aa20.61■□□□□ 0.89
VPS16-204ENST00000417508 FSCN2O14926 492 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 ZNF623O75123 536 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 TBX10O75333 385 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 CSDE1O75534 798 aaKnown RBP20.6■□□□□ 0.89
VPS16-204ENST00000417508 LARGE1O95461 756 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 YWHABP31946 246 aaKnown RBP20.6■□□□□ 0.89
VPS16-204ENST00000417508 PHKA2P46019 1235 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 RAB27AP51159 221 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 POLGP54098 1239 aaPredicted RBP20.6■□□□□ 0.89
VPS16-204ENST00000417508 ZP2Q05996 745 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 SPIRE1Q08AE8 756 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 COASYQ13057 564 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 TMEM31Q5JXX7 168 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 PLA2G4FQ68DD2 849 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 NCAPH2Q6IBW4 605 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 SRGAP1Q7Z6B7 1085 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 ADGRD2Q7Z7M1 963 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 RNF169Q8NCN4 708 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 PSPC1Q8WXF1 523 aaKnown RBP20.6■□□□□ 0.89
VPS16-204ENST00000417508 MSLNLQ96KJ4 702 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 NGRNQ9NPE2 291 aaKnown RBP20.6■□□□□ 0.89
VPS16-204ENST00000417508 SPG21Q9NZD8 308 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 COL4A3BPQ9Y5P4 624 aa20.6■□□□□ 0.89
VPS16-204ENST00000417508 BTBD18B2RXH4 712 aa20.59■□□□□ 0.89
VPS16-204ENST00000417508 LINC01565O15544 149 aa20.59■□□□□ 0.89
VPS16-204ENST00000417508 CSPG5O95196 566 aa20.59■□□□□ 0.89
VPS16-204ENST00000417508 CENPBP07199 599 aaPredicted RBP20.59■□□□□ 0.89
VPS16-204ENST00000417508 ERVFC1P60507 584 aa20.59■□□□□ 0.89
VPS16-204ENST00000417508 CLLU1OSQ5K130 101 aa20.59■□□□□ 0.89
VPS16-204ENST00000417508 TWF2Q6IBS0 349 aaKnown RBP20.59■□□□□ 0.89
VPS16-204ENST00000417508 CATSPER4Q7RTX7 472 aa20.59■□□□□ 0.89
VPS16-204ENST00000417508 RBM23Q86U06 439 aaKnown RBP20.59■□□□□ 0.89
VPS16-204ENST00000417508 DIS3L2Q8IYB7 885 aaKnown RBP20.59■□□□□ 0.89
VPS16-204ENST00000417508 PRPF31Q8WWY3 499 aaKnown RBP20.59■□□□□ 0.89
VPS16-204ENST00000417508 KHSRPQ92945 711 aaKnown RBP eCLIP20.59■□□□□ 0.89
VPS16-204ENST00000417508 DYDC2Q96IM9 177 aa20.59■□□□□ 0.89
VPS16-204ENST00000417508 NLRP4Q96MN2 994 aa20.59■□□□□ 0.89
VPS16-204ENST00000417508 IFT122Q9HBG6 1241 aa20.59■□□□□ 0.89
VPS16-204ENST00000417508 RGL1Q9NZL6 768 aa20.59■□□□□ 0.89
VPS16-204ENST00000417508 CLEC1BQ9P126 229 aa20.59■□□□□ 0.89
VPS16-204ENST00000417508 WRAP73Q9P2S5 460 aaPredicted RBP20.59■□□□□ 0.89
VPS16-204ENST00000417508 LIMCH1Q9UPQ0 1083 aa20.59■□□□□ 0.89
VPS16-204ENST00000417508 DTNBO60941 627 aa20.58■□□□□ 0.89
VPS16-204ENST00000417508 SLITRK3O94933 977 aa20.58■□□□□ 0.89
VPS16-204ENST00000417508 LYPLA2O95372 231 aa20.58■□□□□ 0.89
VPS16-204ENST00000417508 ATF7P17544 494 aaPredicted RBP20.58■□□□□ 0.89
VPS16-204ENST00000417508 ALDH7A1P49419 539 aaKnown RBP20.58■□□□□ 0.89
VPS16-204ENST00000417508 PCBP1Q15365 356 aaKnown RBP eCLIP20.58■□□□□ 0.89
VPS16-204ENST00000417508 CALCRLQ16602 461 aa20.58■□□□□ 0.89
VPS16-204ENST00000417508 XKR9Q5GH70 373 aa20.58■□□□□ 0.89
VPS16-204ENST00000417508 KSR1Q8IVT5 923 aa20.58■□□□□ 0.89
VPS16-204ENST00000417508 TPH2Q8IWU9 490 aa20.58■□□□□ 0.89
VPS16-204ENST00000417508 ZNF579Q8NAF0 562 aaKnown RBP20.58■□□□□ 0.89
VPS16-204ENST00000417508 HELQQ8TDG4 1101 aa20.58■□□□□ 0.89
VPS16-204ENST00000417508 HSD17B14Q9BPX1 270 aa20.58■□□□□ 0.89
VPS16-204ENST00000417508 LRFN3Q9BTN0 628 aa20.58■□□□□ 0.89
VPS16-204ENST00000417508 HCSTQ9UBK5 93 aa20.58■□□□□ 0.89
VPS16-204ENST00000417508 PIN4Q9Y237 131 aaKnown RBP20.58■□□□□ 0.89
VPS16-204ENST00000417508 FAM205CA6NFA0 338 aa20.57■□□□□ 0.88
VPS16-204ENST00000417508 SEC24BO95487 1268 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms