RNA–Protein interactions for RNA: ENST00000416880.5

SEC22C-204, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-204ENST00000416880 TLR9Q9NR96 1032 aa15.32■□□□□ 0.04
SEC22C-204ENST00000416880 PCDHA12Q9UN75 941 aa15.32■□□□□ 0.04
SEC22C-204ENST00000416880 ZNF623O75123 536 aa15.31■□□□□ 0.04
SEC22C-204ENST00000416880 RAB27AP51159 221 aa15.31■□□□□ 0.04
SEC22C-204ENST00000416880 KRT17Q04695 432 aa15.31■□□□□ 0.04
SEC22C-204ENST00000416880 NR5A1Q13285 461 aa15.31■□□□□ 0.04
SEC22C-204ENST00000416880 SMAD2Q15796 467 aaKnown RBP15.31■□□□□ 0.04
SEC22C-204ENST00000416880 SRGAP1Q7Z6B7 1085 aa15.31■□□□□ 0.04
SEC22C-204ENST00000416880 RHPN2Q8IUC4 686 aa15.31■□□□□ 0.04
SEC22C-204ENST00000416880 ADHFE1Q8IWW8 467 aa15.31■□□□□ 0.04
SEC22C-204ENST00000416880 TCP11Q8WWU5 503 aa15.31■□□□□ 0.04
SEC22C-204ENST00000416880 MRPS27Q92552 414 aaKnown RBP15.31■□□□□ 0.04
SEC22C-204ENST00000416880 ZNF558Q96NG5 402 aa15.31■□□□□ 0.04
SEC22C-204ENST00000416880 POP1Q99575 1024 aaKnown RBP15.31■□□□□ 0.04
SEC22C-204ENST00000416880 TLE6Q9H808 572 aa15.31■□□□□ 0.04
SEC22C-204ENST00000416880 NGRNQ9NPE2 291 aaKnown RBP15.31■□□□□ 0.04
SEC22C-204ENST00000416880 RNF19AQ9NV58 838 aa15.31■□□□□ 0.04
SEC22C-204ENST00000416880 CD207Q9UJ71 328 aa15.31■□□□□ 0.04
SEC22C-204ENST00000416880 LIMCH1Q9UPQ0 1083 aa15.31■□□□□ 0.04
SEC22C-204ENST00000416880 TMEM150BA6NC51 233 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 GPR37L1O60883 481 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 LYPLA2O95372 231 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 EYA4O95677 639 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 ALADP13716 330 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 COL9A1P20849 921 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 YWHABP31946 246 aaKnown RBP15.3■□□□□ 0.04
SEC22C-204ENST00000416880 SSTR3P32745 418 aaPredicted RBP15.3■□□□□ 0.04
SEC22C-204ENST00000416880 IRS1P35568 1242 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 PHKA2P46019 1235 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 POLGP54098 1239 aaPredicted RBP15.3■□□□□ 0.04
SEC22C-204ENST00000416880 SPIRE1Q08AE8 756 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 SMAD4Q13485 552 aaKnown RBP15.3■□□□□ 0.04
SEC22C-204ENST00000416880 PCBP1Q15365 356 aaKnown RBP eCLIP15.3■□□□□ 0.04
SEC22C-204ENST00000416880 ATG2AQ2TAZ0 1938 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 EARS2Q5JPH6 523 aaKnown RBP15.3■□□□□ 0.04
SEC22C-204ENST00000416880 KCNT2Q6UVM3 1135 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 LRRC55Q6ZSA7 311 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 POTEDQ86YR6 584 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 PSPC1Q8WXF1 523 aaKnown RBP15.3■□□□□ 0.04
SEC22C-204ENST00000416880 ZNF668Q96K58 619 aaPredicted RBP15.3■□□□□ 0.04
SEC22C-204ENST00000416880 SH2D3AQ9BRG2 576 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 LLPHQ9BRT6 129 aaKnown RBP15.3■□□□□ 0.04
SEC22C-204ENST00000416880 LXNQ9BS40 222 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 EPHX3Q9H6B9 360 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 CD320Q9NPF0 282 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 SPG21Q9NZD8 308 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 COL4A3BPQ9Y5P4 624 aa15.3■□□□□ 0.04
SEC22C-204ENST00000416880 C19orf67A6NJJ6 358 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 BTBD18B2RXH4 712 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 FSCN2O14926 492 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 MBTPS2O43462 519 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 SLITRK3O94933 977 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 LARGE1O95461 756 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 XRCC6P12956 609 aaKnown RBP eCLIP15.29■□□□□ 0.04
SEC22C-204ENST00000416880 FGFR4P22455 802 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 NRIP1P48552 1158 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 NDUFV1P49821 464 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 NPEPPSP55786 919 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 POU5F1BQ06416 359 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 DLX2Q07687 328 aaPredicted RBP15.29■□□□□ 0.04
SEC22C-204ENST00000416880 COASYQ13057 564 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 BMS1Q14692 1282 aaKnown RBP15.29■□□□□ 0.04
SEC22C-204ENST00000416880 SAFBQ15424 915 aaKnown RBP eCLIP15.29■□□□□ 0.04
SEC22C-204ENST00000416880 CALCRLQ16602 461 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 TMEM31Q5JXX7 168 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 PLA2G4FQ68DD2 849 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 TWF2Q6IBS0 349 aaKnown RBP15.29■□□□□ 0.04
SEC22C-204ENST00000416880 NCAPH2Q6IBW4 605 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 CATSPER4Q7RTX7 472 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 ADGRD2Q7Z7M1 963 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 DIS3L2Q8IYB7 885 aaKnown RBP15.29■□□□□ 0.04
SEC22C-204ENST00000416880 RNF169Q8NCN4 708 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 PGBD4Q96DM1 585 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 MSLNLQ96KJ4 702 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 ZSCAN31Q96LW9 406 aaPredicted RBP15.29■□□□□ 0.04
SEC22C-204ENST00000416880 HSD17B14Q9BPX1 270 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 IFT122Q9HBG6 1241 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 ANKEF1Q9NU02 776 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 RGL1Q9NZL6 768 aa15.29■□□□□ 0.04
SEC22C-204ENST00000416880 TBX10O75333 385 aa15.28■□□□□ 0.04
SEC22C-204ENST00000416880 CSDE1O75534 798 aaKnown RBP15.28■□□□□ 0.04
SEC22C-204ENST00000416880 SRGAP2BP0DMP2 458 aa15.28■□□□□ 0.04
SEC22C-204ENST00000416880 ATF7P17544 494 aaPredicted RBP15.28■□□□□ 0.04
SEC22C-204ENST00000416880 GTF2F1P35269 517 aaKnown RBP eCLIP15.28■□□□□ 0.04
SEC22C-204ENST00000416880 ALDH7A1P49419 539 aaKnown RBP15.28■□□□□ 0.04
SEC22C-204ENST00000416880 ZP2Q05996 745 aa15.28■□□□□ 0.04
SEC22C-204ENST00000416880 MXD4Q14582 209 aaPredicted RBP15.28■□□□□ 0.04
SEC22C-204ENST00000416880 XKR9Q5GH70 373 aa15.28■□□□□ 0.04
SEC22C-204ENST00000416880 CLLU1OSQ5K130 101 aa15.28■□□□□ 0.04
SEC22C-204ENST00000416880 TPH2Q8IWU9 490 aa15.28■□□□□ 0.04
SEC22C-204ENST00000416880 PRPF31Q8WWY3 499 aaKnown RBP15.28■□□□□ 0.04
SEC22C-204ENST00000416880 DYDC2Q96IM9 177 aa15.28■□□□□ 0.04
SEC22C-204ENST00000416880 NLRP4Q96MN2 994 aa15.28■□□□□ 0.04
SEC22C-204ENST00000416880 EIF2AK1Q9BQI3 630 aaKnown RBP15.28■□□□□ 0.04
SEC22C-204ENST00000416880 TTC12Q9H892 705 aaPredicted RBP15.28■□□□□ 0.04
SEC22C-204ENST00000416880 WRAP73Q9P2S5 460 aaPredicted RBP15.28■□□□□ 0.04
SEC22C-204ENST00000416880 PIN4Q9Y237 131 aaKnown RBP15.28■□□□□ 0.04
SEC22C-204ENST00000416880 ARIH1Q9Y4X5 557 aaPredicted RBP15.28■□□□□ 0.04
SEC22C-204ENST00000416880 PLXNA4Q9HCM2 1894 aa15.28■□□□□ 0.04
SEC22C-204ENST00000416880 FAM205CA6NFA0 338 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms