RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 GJA9P57773 515 aa15.68■□□□□ 0.1
HMGA1P1-201ENST00000415560 CACNB2Q08289 660 aaPredicted RBP15.68■□□□□ 0.1
HMGA1P1-201ENST00000415560 TFDP1Q14186 410 aa15.68■□□□□ 0.1
HMGA1P1-201ENST00000415560 NFIL3Q16649 462 aa15.68■□□□□ 0.1
HMGA1P1-201ENST00000415560 DEPTORQ8TB45 409 aa15.68■□□□□ 0.1
HMGA1P1-201ENST00000415560 ZNF296Q8WUU4 475 aaPredicted RBP15.68■□□□□ 0.1
HMGA1P1-201ENST00000415560 PSPC1Q8WXF1 523 aaKnown RBP15.68■□□□□ 0.1
HMGA1P1-201ENST00000415560 TMEM143Q96AN5 459 aa15.68■□□□□ 0.1
HMGA1P1-201ENST00000415560 FIZ1Q96SL8 496 aa15.68■□□□□ 0.1
HMGA1P1-201ENST00000415560 FGFBP2Q9BYJ0 223 aa15.68■□□□□ 0.1
HMGA1P1-201ENST00000415560 XPO4Q9C0E2 1151 aaKnown RBP15.68■□□□□ 0.1
HMGA1P1-201ENST00000415560 IGKV6-21A0A0C4DH24 114 aa15.67■□□□□ 0.1
HMGA1P1-201ENST00000415560 N4BP3O15049 544 aa15.67■□□□□ 0.1
HMGA1P1-201ENST00000415560 ADCY6O43306 1168 aa15.67■□□□□ 0.1
HMGA1P1-201ENST00000415560 ZNF286BP0CG31 522 aa15.67■□□□□ 0.1
HMGA1P1-201ENST00000415560 KLRC1P26715 233 aa15.67■□□□□ 0.1
HMGA1P1-201ENST00000415560 STRN3Q13033 797 aa15.67■□□□□ 0.1
HMGA1P1-201ENST00000415560 MYBPC2Q14324 1141 aa15.67■□□□□ 0.1
HMGA1P1-201ENST00000415560 FSCN1Q16658 493 aaKnown RBP15.67■□□□□ 0.1
HMGA1P1-201ENST00000415560 CCDC40Q4G0X9 1142 aa15.67■□□□□ 0.1
HMGA1P1-201ENST00000415560 ZCWPW2Q504Y3 356 aa15.67■□□□□ 0.1
HMGA1P1-201ENST00000415560 EFCAB12Q6NXP0 572 aa15.67■□□□□ 0.1
HMGA1P1-201ENST00000415560 SLAIN1Q8ND83 568 aa15.67■□□□□ 0.1
HMGA1P1-201ENST00000415560 TRPV1Q8NER1 839 aa15.67■□□□□ 0.1
HMGA1P1-201ENST00000415560 DENND3A2RUS2 1198 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 K7ERI5 159 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 PPP1R37O75864 691 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 C6orf222P0C671 652 aaPredicted RBP15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 PRKAR2AP13861 404 aaKnown RBP15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 PTGS1P23219 599 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 NR2F2P24468 414 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 COPB1P53618 953 aaKnown RBP15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 SOX10P56693 466 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 IGBP1P78318 339 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 CDC42EP1Q00587 391 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 PPFIA1Q13136 1202 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 HSP90AA2PQ14568 343 aaPredicted RBP15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 KRT31Q15323 416 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 GNASQ5JWF2 1037 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 ZBTB8OSQ8IWT0 167 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 METTL13Q8N6R0 699 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 TMEM161BQ8NDZ6 487 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 CNOT6LQ96LI5 555 aaKnown RBP15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 TUBGCP2Q9BSJ2 902 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 UPF3AQ9H1J1 476 aaKnown RBP15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 C2orf40Q9H1Z8 148 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 TMEM134Q9H6X4 195 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 METTL14Q9HCE5 456 aaKnown RBP15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 SUCLA2Q9P2R7 463 aaPredicted RBP15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 TBX20Q9UMR3 447 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 NRCAMQ92823 1304 aa15.66■□□□□ 0.1
HMGA1P1-201ENST00000415560 A0A1B0GTH6 734 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 LRRIQ4A6NIV6 560 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 MSCO60682 206 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 NR3C1P04150 777 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 GNAT1P11488 350 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 PRKCSHP14314 528 aaPredicted RBP15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 ELNP15502 786 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 GLRA2P23416 452 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 PSEN2P49810 448 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 EFNA5P52803 228 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 PPP2R3AQ06190 1150 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 MFSD10Q14728 455 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 NR1I3Q14994 352 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 GRIK4Q16099 956 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 KIAA0753Q2KHM9 967 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 MTHFD1LQ6UB35 978 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 IRF2BP1Q8IU81 584 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 ZC3H3Q8IXZ2 948 aaKnown RBP15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 PRPF31Q8WWY3 499 aaKnown RBP15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 KCNN1Q92952 543 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 NAP1L5Q96NT1 182 aaPredicted RBP15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 NOC4LQ9BVI4 516 aaKnown RBP15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 VPS16Q9H269 839 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 IMPACTQ9P2X3 320 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 FRMD4BQ9Y2L6 1034 aa15.65■□□□□ 0.1
HMGA1P1-201ENST00000415560 ZBTB42B2RXF5 422 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 PES1O00541 588 aaKnown RBP15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 CLIC2O15247 247 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 SLC16A3O15427 465 aaKnown RBP15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 TGFB1I1O43294 461 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 C22orf31O95567 290 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 F2P00734 622 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 EPB41P11171 864 aaKnown RBP15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 HOXD13P35453 343 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 CHMP4BP1P59074 171 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 NKX3-2P78367 333 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 BEX3Q00994 111 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 POU5F1BQ06416 359 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 LAMTOR4Q0VGL1 99 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 FRMD5Q7Z6J6 570 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 SLC9A9Q8IVB4 645 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 PCSK9Q8NBP7 692 aaKnown RBP15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 SPC24Q8NBT2 197 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 ASAP3Q8TDY4 903 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 BSNDQ8WZ55 320 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 MAP7D2Q96T17 732 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 MTG1Q9BT17 334 aaPredicted RBP15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 MKNK1Q9BUB5 465 aa15.64■□□□□ 0.09
HMGA1P1-201ENST00000415560 RTN4Q9NQC3 1192 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms