RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 MAGOHBQ96A72 148 aaKnown RBP10.61□□□□□ -0.71
CD44-206ENST00000415148 SEC16BQ96JE7 1060 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 MTFR1LQ9H019 292 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 DNAJC18Q9H819 358 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.61□□□□□ -0.71
CD44-206ENST00000415148 DNAJC12Q9UKB3 198 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 UBR3Q6ZT12 1888 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 FRMPD4Q14CM0 1322 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 GOLGA6L10A0A0M3HER8 536 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 ANKRD62A6NC57 917 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 F5H6K3 240 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 CLIC2O15247 247 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 BUB1BO60566 1050 aaPredicted RBP10.61□□□□□ -0.71
CD44-206ENST00000415148 HSPA6P17066 643 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 GBP1P32455 592 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 HSPA1LP34931 641 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 FKBP1AP62942 108 aaKnown RBP10.61□□□□□ -0.71
CD44-206ENST00000415148 KLRC3Q07444 240 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 DHX34Q14147 1143 aaKnown RBP10.61□□□□□ -0.71
CD44-206ENST00000415148 DRAP1Q14919 205 aaPredicted RBP10.61□□□□□ -0.71
CD44-206ENST00000415148 ODF2Q5BJF6 829 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 ANKRD20A8PQ5CZ79 823 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 SYDE2Q5VT97 1194 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 CROCCP2Q86T23 111 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 TAX1BP1Q86VP1 789 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 IDI2Q9BXS1 227 aa10.61□□□□□ -0.71
CD44-206ENST00000415148 ZMYM2Q9UBW7 1377 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 FGGP02679 453 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 TNFAIP3P21580 790 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 POLD1P28340 1107 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 ZNF76P36508 570 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 CRKP46108 304 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 ZNF131P52739 623 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 SETQ01105 290 aaPredicted RBP10.6□□□□□ -0.71
CD44-206ENST00000415148 DHX9Q08211 1270 aaKnown RBP10.6□□□□□ -0.71
CD44-206ENST00000415148 KIF22Q14807 665 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 DUPD1Q68J44 220 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 HS2ST1Q7LGA3 356 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 ZNF720Q7Z2F6 126 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 SLC9A9Q8IVB4 645 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 RHOT2Q8IXI1 618 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 FUKQ8N0W3 1084 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 MYCT1Q8N699 235 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 TMEM174Q8WUU8 243 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 CCDC114Q96M63 670 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 EPB41L4BQ9H329 900 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 PARVGQ9HBI0 331 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 OSGEPQ9NPF4 335 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 ODF2LQ9ULJ1 636 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 FRMD4BQ9Y2L6 1034 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 IGSF9BQ9UPX0 1349 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 SIPA1L1O43166 1804 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 IGLV3-22A0A075B6J6 115 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 MIF4GDA9UHW6 222 aaKnown RBP10.6□□□□□ -0.71
CD44-206ENST00000415148 ECM2O94769 699 aaPredicted RBP10.6□□□□□ -0.71
CD44-206ENST00000415148 SLITRK3O94933 977 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 NUDT17P0C025 328 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 SCNN1DP51172 638 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 PPP2R5CQ13362 524 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 DCAF12L1Q5VU92 463 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 AADACL2Q6P093 401 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 OTOP1Q7RTM1 612 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 HOOK3Q86VS8 718 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 GLYCTKQ8IVS8 523 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 ATP8B4Q8TF62 1192 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 TLCD1Q96CP7 247 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 C8orf37Q96NL8 207 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 PSMD1Q99460 953 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 FMO2Q99518 471 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 ERP44Q9BS26 406 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 ERVK-5Q9HDB9 667 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 A1CFQ9NQ94 594 aaKnown RBP10.6□□□□□ -0.71
CD44-206ENST00000415148 APEX2Q9UBZ4 518 aa10.6□□□□□ -0.71
CD44-206ENST00000415148 TPX2Q9ULW0 747 aaKnown RBP10.6□□□□□ -0.71
CD44-206ENST00000415148 POLRMTO00411 1230 aaKnown RBP10.59□□□□□ -0.71
CD44-206ENST00000415148 EML1O00423 815 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 CAND2O75155 1236 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 DRD4P21917 467 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 SCTRP47872 440 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 DR1Q01658 176 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 CYP4A11Q02928 519 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 ICA1Q05084 483 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 KCNA1Q09470 495 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 NFIAQ12857 509 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 CYB5D1Q6P9G0 228 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 CCDC121Q6ZUS5 278 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 ZFPM1Q8IX07 1006 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 KIRREL3Q8IZU9 778 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 MORC4Q8TE76 937 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 GPR88Q9GZN0 384 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 LRRC4BQ9NT99 713 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 MCM8Q9UJA3 840 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 RASAL2Q9UJF2 1139 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 PNMA2Q9UL42 364 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 PPP1R9AQ9ULJ8 1098 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 PFASO15067 1338 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 RAD21O60216 631 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 PSMD10O75832 226 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 GGPS1O95749 300 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 BMP3P12645 472 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms